RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PRSS46E5RG02 174 aa11.05□□□□□ -0.64
SREBF1-202ENST00000355815 FNDC10F2Z333 226 aa11.05□□□□□ -0.64
SREBF1-202ENST00000355815 F8VRH5 84 aa11.05□□□□□ -0.64
SREBF1-202ENST00000355815 C8orf86Q6ZUL3 223 aa11.05□□□□□ -0.64
SREBF1-202ENST00000355815 ZNF292O60281 2723 aa11.05□□□□□ -0.64
SREBF1-202ENST00000355815 COL4A2P08572 1712 aa11.04□□□□□ -0.64
SREBF1-202ENST00000355815 KNCNA6PVL3 124 aa11.04□□□□□ -0.64
SREBF1-202ENST00000355815 FCN3O75636 299 aa11.04□□□□□ -0.64
SREBF1-202ENST00000355815 GDF5OSQ5U4N7 250 aa11.04□□□□□ -0.64
SREBF1-202ENST00000355815 ITLN2Q8WWU7 325 aaPredicted RBP11.04□□□□□ -0.64
SREBF1-202ENST00000355815 PRO1854Q9UHT4 67 aa11.04□□□□□ -0.64
SREBF1-202ENST00000355815 MRPL23Q16540 153 aaKnown RBP11.04□□□□□ -0.64
SREBF1-202ENST00000355815 PHLDA1Q8WV24 401 aaPredicted RBP11.04□□□□□ -0.64
SREBF1-202ENST00000355815 ASPMQ8IZT6 3477 aa11.04□□□□□ -0.64
SREBF1-202ENST00000355815 ATMQ13315 3056 aa11.04□□□□□ -0.64
SREBF1-202ENST00000355815 RNASE13Q5GAN3 156 aaKnown RBP11.04□□□□□ -0.64
SREBF1-202ENST00000355815 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
SREBF1-202ENST00000355815 AKAP13Q12802 2813 aa11.03□□□□□ -0.64
SREBF1-202ENST00000355815 EGR2P11161 476 aaPredicted RBP11.03□□□□□ -0.64
SREBF1-202ENST00000355815 Q8N8P6 123 aa11.03□□□□□ -0.64
SREBF1-202ENST00000355815 WIPF2Q8TF74 440 aaPredicted RBP11.03□□□□□ -0.64
SREBF1-202ENST00000355815 RNF183Q96D59 192 aa11.03□□□□□ -0.64
SREBF1-202ENST00000355815 Q8N7P7 452 aa11.02□□□□□ -0.64
SREBF1-202ENST00000355815 TRAV13-1A0A0B4J241 112 aa11.02□□□□□ -0.65
SREBF1-202ENST00000355815 IGKV1-17P01599 117 aa11.02□□□□□ -0.65
SREBF1-202ENST00000355815 LINC00158P58513 81 aa11.02□□□□□ -0.65
SREBF1-202ENST00000355815 LINC01587Q99440 93 aa11.02□□□□□ -0.65
SREBF1-202ENST00000355815 CTRLP40313 264 aa11.02□□□□□ -0.65
SREBF1-202ENST00000355815 PAX8Q06710 450 aa11.02□□□□□ -0.65
SREBF1-202ENST00000355815 C1orf159Q96HA4 380 aa11.02□□□□□ -0.65
SREBF1-202ENST00000355815 VCYO14598 125 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 CR1LQ2VPA4 569 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 LINC01559Q495D7 138 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 CCL19Q99731 98 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 ATP6V0E1O15342 81 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 TIMM21Q9BVV7 248 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 IGLV2-23P01705 113 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 PAX1P15863 534 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 LYPD1Q8N2G4 141 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 COPS9Q8WXC6 57 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 LINC00322Q6ZN03 302 aaPredicted RBP11.01□□□□□ -0.65
SREBF1-202ENST00000355815 LINC00311Q8N616 119 aa11.01□□□□□ -0.65
SREBF1-202ENST00000355815 PAX4O43316 350 aa11□□□□□ -0.65
SREBF1-202ENST00000355815 ZNF491Q8N8L2 437 aa11□□□□□ -0.65
SREBF1-202ENST00000355815 IGF2BP2-AS1Q96M15 143 aa11□□□□□ -0.65
SREBF1-202ENST00000355815 PCSK5Q92824 1860 aa11□□□□□ -0.65
SREBF1-202ENST00000355815 SIVA1O15304 175 aa11□□□□□ -0.65
SREBF1-202ENST00000355815 KAAG1Q9UBP8 84 aa11□□□□□ -0.65
SREBF1-202ENST00000355815 MSRB2Q9Y3D2 182 aa11□□□□□ -0.65
SREBF1-202ENST00000355815 C11orf44Q8N8P7 122 aa10.99□□□□□ -0.65
SREBF1-202ENST00000355815 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
SREBF1-202ENST00000355815 YAE1D1Q9NRH1 226 aa10.99□□□□□ -0.65
SREBF1-202ENST00000355815 IGKV1D-37A0A075B6S9 117 aa10.99□□□□□ -0.65
SREBF1-202ENST00000355815 SMIM2Q9BVW6 85 aa10.99□□□□□ -0.65
SREBF1-202ENST00000355815 FN1P02751 2386 aaKnown RBP10.99□□□□□ -0.65
SREBF1-202ENST00000355815 H3BUX3 64 aa10.99□□□□□ -0.65
SREBF1-202ENST00000355815 IGHV3-53P01767 116 aa10.99□□□□□ -0.65
SREBF1-202ENST00000355815 MT-ATP8P03928 68 aa10.99□□□□□ -0.65
SREBF1-202ENST00000355815 PRB1P04280 392 aa10.99□□□□□ -0.65
SREBF1-202ENST00000355815 TET2Q6N021 2002 aaPredicted RBP10.99□□□□□ -0.65
SREBF1-202ENST00000355815 CARD19Q96LW7 228 aa10.98□□□□□ -0.65
SREBF1-202ENST00000355815 PKD1L2Q7Z442 2459 aa10.98□□□□□ -0.65
SREBF1-202ENST00000355815 FOXI1Q12951 378 aa10.98□□□□□ -0.65
SREBF1-202ENST00000355815 PRIMA1Q86XR5 153 aa10.98□□□□□ -0.65
SREBF1-202ENST00000355815 PIMREGQ9BSJ6 248 aa10.98□□□□□ -0.65
SREBF1-202ENST00000355815 ACANP16112 2415 aa10.98□□□□□ -0.65
SREBF1-202ENST00000355815 NBL1P41271 181 aa10.98□□□□□ -0.65
SREBF1-202ENST00000355815 SDHAF1A6NFY7 115 aa10.98□□□□□ -0.65
SREBF1-202ENST00000355815 CDSNQ15517 529 aa10.98□□□□□ -0.65
SREBF1-202ENST00000355815 ADAMTS20P59510 1910 aa10.97□□□□□ -0.65
SREBF1-202ENST00000355815 IGLV1-47P01700 117 aa10.97□□□□□ -0.65
SREBF1-202ENST00000355815 SHISA2Q6UWI4 295 aa10.97□□□□□ -0.65
SREBF1-202ENST00000355815 K7EIM0 57 aa10.97□□□□□ -0.65
SREBF1-202ENST00000355815 THAP8Q8NA92 274 aa10.97□□□□□ -0.65
SREBF1-202ENST00000355815 KALRNO60229 2985 aa10.97□□□□□ -0.65
SREBF1-202ENST00000355815 A0A087WX48 190 aa10.97□□□□□ -0.65
SREBF1-202ENST00000355815 J3QQQ9 107 aa10.97□□□□□ -0.65
SREBF1-202ENST00000355815 DMDP11532 3685 aa10.96□□□□□ -0.65
SREBF1-202ENST00000355815 ZZEF1O43149 2961 aa10.96□□□□□ -0.65
SREBF1-202ENST00000355815 SYNJ2BPP57105 145 aa10.96□□□□□ -0.65
SREBF1-202ENST00000355815 LINC00310P59036 64 aa10.96□□□□□ -0.65
SREBF1-202ENST00000355815 TRGV2A0A075B6R0 118 aa10.96□□□□□ -0.66
SREBF1-202ENST00000355815 FOXE3Q13461 319 aa10.96□□□□□ -0.66
SREBF1-202ENST00000355815 DMXL1Q9Y485 3027 aa10.96□□□□□ -0.66
SREBF1-202ENST00000355815 IGLV2-8P01709 118 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 DEFB1P60022 68 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 ANKRD29Q8N6D5 301 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 TRAV41A0A0B4J266 112 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 ZFP36P26651 326 aaKnown RBP10.95□□□□□ -0.66
SREBF1-202ENST00000355815 PDE6HQ13956 83 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 TRAV12-1A0A0B4J245 112 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 TEX22C9J3V5 150 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 GP9P14770 177 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 ADORA2A-AS1P86434 159 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 TEN1Q86WV5 123 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 DYNAPQ8N1N2 210 aa10.95□□□□□ -0.66
SREBF1-202ENST00000355815 RPL39LQ96EH5 51 aaKnown RBP10.95□□□□□ -0.66
SREBF1-202ENST00000355815 F6UB75 175 aa10.94□□□□□ -0.66
SREBF1-202ENST00000355815 NRGNQ92686 78 aa10.94□□□□□ -0.66
SREBF1-202ENST00000355815 IGHV3-38A0A0C4DH36 116 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms