RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 HIST1H2BJP06899 126 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 MED14OSP0DP75 135 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 HIST1H2BOP23527 126 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 HIST1H2BBP33778 126 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 HIST1H2BDP58876 126 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 HIST1H2BCP62807 126 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 TWIST1Q15672 202 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 HIST2H2BEQ16778 126 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.99□□□□□ -0.81
HOXA1-202ENST00000355633 HIST1H2BHQ93079 126 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 HIST1H2BNQ99877 126 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 HIST1H2BMQ99879 126 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 C20orf144Q9BQM9 153 aa9.99□□□□□ -0.81
HOXA1-202ENST00000355633 APCSP02743 223 aa9.98□□□□□ -0.81
HOXA1-202ENST00000355633 RPL35AP18077 110 aaKnown RBP9.98□□□□□ -0.81
HOXA1-202ENST00000355633 SLAQ13239 276 aa9.98□□□□□ -0.81
HOXA1-202ENST00000355633 PYY3Q5JQD4 70 aa9.98□□□□□ -0.81
HOXA1-202ENST00000355633 OR10AG1Q8NH19 301 aa9.98□□□□□ -0.81
HOXA1-202ENST00000355633 RNASE3P12724 160 aaKnown RBP9.97□□□□□ -0.81
HOXA1-202ENST00000355633 SPANXN1Q5VSR9 72 aa9.97□□□□□ -0.81
HOXA1-202ENST00000355633 Q8N1Y9 231 aa9.97□□□□□ -0.81
HOXA1-202ENST00000355633 GATD1Q8NB37 220 aa9.97□□□□□ -0.81
HOXA1-202ENST00000355633 TP53TG3Q9ULZ0 132 aa9.97□□□□□ -0.81
HOXA1-202ENST00000355633 HOXA5P20719 270 aa9.97□□□□□ -0.81
HOXA1-202ENST00000355633 CACNG7P62955 275 aa9.97□□□□□ -0.81
HOXA1-202ENST00000355633 PRR31Q5SQ13 230 aa9.97□□□□□ -0.81
HOXA1-202ENST00000355633 PHLDA3Q9Y5J5 127 aa9.97□□□□□ -0.81
HOXA1-202ENST00000355633 VWFP04275 2813 aa9.97□□□□□ -0.81
HOXA1-202ENST00000355633 TRGV11A0A075B6L2 103 aa9.96□□□□□ -0.81
HOXA1-202ENST00000355633 CBY3A6NI87 242 aa9.96□□□□□ -0.81
HOXA1-202ENST00000355633 KIAA1644Q3SXP7 199 aa9.96□□□□□ -0.81
HOXA1-202ENST00000355633 MORN3Q6PF18 240 aaPredicted RBP9.96□□□□□ -0.81
HOXA1-202ENST00000355633 ZNF493Q6ZR52 646 aa9.96□□□□□ -0.81
HOXA1-202ENST00000355633 SCRT2Q9NQ03 307 aa9.96□□□□□ -0.81
HOXA1-202ENST00000355633 MSRB1Q9NZV6 116 aa9.96□□□□□ -0.81
HOXA1-202ENST00000355633 IGHV4-4A0A075B6R2 117 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 IGHV3-16A0A0C4DH30 117 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 HTN1P15515 57 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 LINC01587Q99440 93 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 NOTCH3Q9UM47 2321 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 LINC00614P0C842 121 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 TMEM256Q8N2U0 113 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 TMEM208Q9BTX3 173 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 C1QTNF4Q9BXJ3 329 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 MDFICQ9P1T7 246 aa9.95□□□□□ -0.82
HOXA1-202ENST00000355633 M0R381 172 aa9.94□□□□□ -0.82
HOXA1-202ENST00000355633 SPRY2O43597 315 aa9.94□□□□□ -0.82
HOXA1-202ENST00000355633 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
HOXA1-202ENST00000355633 NDUFA6P56556 154 aa9.94□□□□□ -0.82
HOXA1-202ENST00000355633 C1orf158Q8N1D5 194 aa9.94□□□□□ -0.82
HOXA1-202ENST00000355633 LINC00467Q9BRT7 94 aa9.94□□□□□ -0.82
HOXA1-202ENST00000355633 TMEM191AQ9H0A3 160 aa9.94□□□□□ -0.82
HOXA1-202ENST00000355633 GAGE1Q13065 139 aa9.94□□□□□ -0.82
HOXA1-202ENST00000355633 C9orf85Q96MD7 179 aa9.94□□□□□ -0.82
HOXA1-202ENST00000355633 IGHV3OR16-12A0A075B7B8 117 aa9.93□□□□□ -0.82
HOXA1-202ENST00000355633 LOC102724200A0A096LPH7 203 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-202ENST00000355633 TMEM238LA0A1B0GVL6 79 aa9.93□□□□□ -0.82
HOXA1-202ENST00000355633 SRIP30626 198 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 FAM104BQ5XKR9 115 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 SMIM15Q7Z3B0 74 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 MDFIQ99750 246 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 NDUFAF3Q9BU61 184 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 CSTL1Q9H114 145 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 GOLT1BQ9Y3E0 138 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 TRRAPQ9Y4A5 3859 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 STAB1Q9NY15 2570 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 PRM2P04554 102 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 DMRTA1Q5VZB9 504 aa9.92□□□□□ -0.82
HOXA1-202ENST00000355633 NXPH4O95158 308 aa9.91□□□□□ -0.82
HOXA1-202ENST00000355633 EVI2AP22794 236 aa9.91□□□□□ -0.82
HOXA1-202ENST00000355633 ZNF415Q09FC8 603 aa9.91□□□□□ -0.82
HOXA1-202ENST00000355633 MUC4Q99102 2169 aa9.91□□□□□ -0.82
HOXA1-202ENST00000355633 CSNK1G2-AS1Q8NCQ2 148 aa9.9□□□□□ -0.82
HOXA1-202ENST00000355633 ALKBH7Q9BT30 221 aaPredicted RBP9.9□□□□□ -0.82
HOXA1-202ENST00000355633 EGFEM1PQ0D2K5 195 aa9.9□□□□□ -0.82
HOXA1-202ENST00000355633 SYT8Q8NBV8 401 aa9.9□□□□□ -0.82
HOXA1-202ENST00000355633 AP1S3Q96PC3 154 aa9.9□□□□□ -0.82
HOXA1-202ENST00000355633 MRPL51Q4U2R6 128 aaKnown RBP9.89□□□□□ -0.83
HOXA1-202ENST00000355633 RNF185Q96GF1 192 aa9.89□□□□□ -0.83
HOXA1-202ENST00000355633 COL6A5A8TX70 2615 aa9.89□□□□□ -0.83
HOXA1-202ENST00000355633 AZU1P20160 251 aa9.89□□□□□ -0.83
HOXA1-202ENST00000355633 KRTAP10-11P60412 298 aa9.89□□□□□ -0.83
HOXA1-202ENST00000355633 Q0VG73 95 aa9.89□□□□□ -0.83
HOXA1-202ENST00000355633 OR10J3Q5JRS4 329 aa9.89□□□□□ -0.83
HOXA1-202ENST00000355633 COA6Q5JTJ3 125 aaKnown RBP9.89□□□□□ -0.83
HOXA1-202ENST00000355633 C11orf72Q8NBR9 251 aa9.89□□□□□ -0.83
HOXA1-202ENST00000355633 RCHY1Q96PM5 261 aa9.89□□□□□ -0.83
HOXA1-202ENST00000355633 DLEU1O43261 78 aa9.88□□□□□ -0.83
HOXA1-202ENST00000355633 G0S2P27469 103 aa9.88□□□□□ -0.83
HOXA1-202ENST00000355633 OR10D4PQ8NGN7 298 aa9.88□□□□□ -0.83
HOXA1-202ENST00000355633 DPH3P1Q9H4G8 78 aa9.88□□□□□ -0.83
HOXA1-202ENST00000355633 KIR2DL5BA0A0G2JN68 375 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 KIR2DL5BA0A0G2JPC4 375 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 D6R8Y8 96 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 G3V4G9 280 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 IGHV4-30-4P0DP06 118 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 APOC4P55056 127 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 ZNF876PQ49A33 203 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms