RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 TRBV12-3P01733 135 aa13.7□□□□□ -0.22
PDZD3-202ENST00000355547 APRG1Q8IVJ8 170 aa13.7□□□□□ -0.22
PDZD3-202ENST00000355547 NHP2Q9NX24 153 aaKnown RBP13.7□□□□□ -0.22
PDZD3-202ENST00000355547 ASIPP42127 132 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 WFDC12Q8WWY7 111 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 MYO18BQ8IUG5 2567 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 SPTBN1Q01082 2364 aaKnown RBP13.69□□□□□ -0.22
PDZD3-202ENST00000355547 IGHV1-69DA0A0B4J2H0 117 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 E9PLD3 99 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 LINC01619G3V211 115 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 M0R381 172 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 IGHV1-69P01742 117 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 Q5PR19 223 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 NEXN-AS1Q8NBZ9 246 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 SCGB3A1Q96QR1 104 aa13.69□□□□□ -0.22
PDZD3-202ENST00000355547 RNF223E7ERA6 249 aa13.68□□□□□ -0.22
PDZD3-202ENST00000355547 CKS1BP61024 79 aa13.68□□□□□ -0.22
PDZD3-202ENST00000355547 TRBV7-9A0A0J9YWB2 115 aa13.67□□□□□ -0.22
PDZD3-202ENST00000355547 J3KRW8 73 aa13.67□□□□□ -0.22
PDZD3-202ENST00000355547 ANXA2RQ3ZCQ2 193 aa13.67□□□□□ -0.22
PDZD3-202ENST00000355547 S100A4P26447 101 aaKnown RBP13.67□□□□□ -0.22
PDZD3-202ENST00000355547 USMG5Q96IX5 58 aa13.67□□□□□ -0.22
PDZD3-202ENST00000355547 PHLDA3Q9Y5J5 127 aa13.67□□□□□ -0.22
PDZD3-202ENST00000355547 IGHV3OR16-10A0A075B7F0 116 aa13.66□□□□□ -0.22
PDZD3-202ENST00000355547 IGLL5B9A064 214 aa13.66□□□□□ -0.22
PDZD3-202ENST00000355547 H3BUA1 57 aa13.66□□□□□ -0.22
PDZD3-202ENST00000355547 C14orf178Q8N769 122 aaPredicted RBP13.66□□□□□ -0.22
PDZD3-202ENST00000355547 POM121L12Q8N7R1 296 aa13.66□□□□□ -0.22
PDZD3-202ENST00000355547 RPL39LQ96EH5 51 aaKnown RBP13.66□□□□□ -0.22
PDZD3-202ENST00000355547 ASH1LQ9NR48 2969 aaKnown RBP13.66□□□□□ -0.22
PDZD3-202ENST00000355547 SPRY2O43597 315 aa13.66□□□□□ -0.22
PDZD3-202ENST00000355547 TRBV7-3A0A075B6L6 115 aa13.65□□□□□ -0.22
PDZD3-202ENST00000355547 DEFB1P60022 68 aa13.65□□□□□ -0.22
PDZD3-202ENST00000355547 C12orf74Q32Q52 190 aa13.65□□□□□ -0.22
PDZD3-202ENST00000355547 IGHV4-39P01824 125 aa13.65□□□□□ -0.22
PDZD3-202ENST00000355547 MYMXA0A1B0GTQ4 84 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 OR11H12B2RN74 326 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 NXPH4O95158 308 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 PPP1R17O96001 155 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 IGHG2P01859 326 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 RNASE3P12724 160 aaKnown RBP13.64□□□□□ -0.23
PDZD3-202ENST00000355547 RNASE4P34096 147 aaKnown RBP13.64□□□□□ -0.23
PDZD3-202ENST00000355547 OR11H1Q8NG94 326 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 OR11H2Q8NH07 326 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 KLK15Q9H2R5 256 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 A0A1B0GWB2 263 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 C2orf66Q6UXQ4 117 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 BRD3OSQ6XYD6 125 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 MTURNQ8N3F0 131 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 HIST1H4GQ99525 98 aa13.64□□□□□ -0.23
PDZD3-202ENST00000355547 SVEP1Q4LDE5 3571 aa13.63□□□□□ -0.23
PDZD3-202ENST00000355547 GNRH2O43555 120 aa13.63□□□□□ -0.23
PDZD3-202ENST00000355547 BAALCQ8WXS3 180 aa13.63□□□□□ -0.23
PDZD3-202ENST00000355547 USP9XQ93008 2570 aaPredicted RBP13.63□□□□□ -0.23
PDZD3-202ENST00000355547 WFDC2Q14508 124 aa13.62□□□□□ -0.23
PDZD3-202ENST00000355547 SPAG8Q99932 426 aaPredicted RBP13.62□□□□□ -0.23
PDZD3-202ENST00000355547 F6UB75 175 aa13.62□□□□□ -0.23
PDZD3-202ENST00000355547 ZNF479Q96JC4 524 aa13.62□□□□□ -0.23
PDZD3-202ENST00000355547 TRAV26-1A0A087WT03 109 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 C19orf84I3L1E1 186 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 MGPP08493 103 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 RPL32P62910 135 aaKnown RBP13.61□□□□□ -0.23
PDZD3-202ENST00000355547 KIF25-AS1Q9Y6Z4 181 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 IGHV4OR15-8A0A075B7B6 117 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 A0A087WW49 117 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 A6NDX4 124 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 PRSS29PA6NIE9 313 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 IGHV3-11P01762 117 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 LINC00315P59091 139 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 RHPN1-AS1Q9BWJ2 59 aa13.61□□□□□ -0.23
PDZD3-202ENST00000355547 CRYBA4P53673 196 aa13.6□□□□□ -0.23
PDZD3-202ENST00000355547 SPTAN1Q13813 2472 aaKnown RBP13.6□□□□□ -0.23
PDZD3-202ENST00000355547 RPL11P62913 178 aaKnown RBP13.6□□□□□ -0.23
PDZD3-202ENST00000355547 UTP20O75691 2785 aaKnown RBP13.6□□□□□ -0.23
PDZD3-202ENST00000355547 UBR5O95071 2799 aaPredicted RBP13.6□□□□□ -0.23
PDZD3-202ENST00000355547 ABCA2Q9BZC7 2435 aa13.59□□□□□ -0.23
PDZD3-202ENST00000355547 KLLNB2CW77 178 aa13.59□□□□□ -0.23
PDZD3-202ENST00000355547 LGALS1P09382 135 aaKnown RBP13.59□□□□□ -0.23
PDZD3-202ENST00000355547 RRN3P1Q2M238 152 aa13.59□□□□□ -0.23
PDZD3-202ENST00000355547 AGRNO00468 2067 aa13.59□□□□□ -0.23
PDZD3-202ENST00000355547 IGHV4-61A0A0C4DH41 118 aa13.59□□□□□ -0.23
PDZD3-202ENST00000355547 IGLV1-40P01703 118 aa13.59□□□□□ -0.23
PDZD3-202ENST00000355547 LY6EQ16553 131 aa13.59□□□□□ -0.23
PDZD3-202ENST00000355547 IGHV4-38-2P0DP08 117 aa13.58□□□□□ -0.24
PDZD3-202ENST00000355547 PF4V1P10720 104 aa13.58□□□□□ -0.24
PDZD3-202ENST00000355547 PRADC1Q9BSG0 188 aa13.58□□□□□ -0.24
PDZD3-202ENST00000355547 MRPL16Q9NX20 251 aaKnown RBP13.58□□□□□ -0.24
PDZD3-202ENST00000355547 DAZ1Q9NQZ3 744 aaKnown RBP13.57□□□□□ -0.24
PDZD3-202ENST00000355547 AKAP6Q13023 2319 aa13.57□□□□□ -0.24
PDZD3-202ENST00000355547 GEMIN7Q9H840 131 aaKnown RBP13.57□□□□□ -0.24
PDZD3-202ENST00000355547 LINC01549A6NIU2 74 aa13.56□□□□□ -0.24
PDZD3-202ENST00000355547 H3BUX3 64 aa13.56□□□□□ -0.24
PDZD3-202ENST00000355547 CRYGDP07320 174 aa13.56□□□□□ -0.24
PDZD3-202ENST00000355547 COX6B1P14854 86 aa13.56□□□□□ -0.24
PDZD3-202ENST00000355547 BLCAPP62952 87 aa13.56□□□□□ -0.24
PDZD3-202ENST00000355547 ETDBQ3ZM63 59 aa13.56□□□□□ -0.24
PDZD3-202ENST00000355547 PRO0461Q9UI25 63 aa13.56□□□□□ -0.24
PDZD3-202ENST00000355547 K7EMT4 169 aa13.56□□□□□ -0.24
PDZD3-202ENST00000355547 POLR2KP53803 58 aaKnown RBP13.56□□□□□ -0.24
PDZD3-202ENST00000355547 PIMREGQ9BSJ6 248 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms