RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SPTBN1Q01082 2364 aaKnown RBP9.9□□□□□ -0.82
SYNCRIP-201ENST00000355238 F5H768 121 aa9.9□□□□□ -0.82
SYNCRIP-201ENST00000355238 K7EIM0 57 aa9.9□□□□□ -0.82
SYNCRIP-201ENST00000355238 MSMBP08118 114 aa9.9□□□□□ -0.82
SYNCRIP-201ENST00000355238 CLEC2BQ92478 149 aa9.9□□□□□ -0.82
SYNCRIP-201ENST00000355238 MP68P56378 58 aa9.9□□□□□ -0.82
SYNCRIP-201ENST00000355238 YPEL4Q96NS1 127 aa9.9□□□□□ -0.82
SYNCRIP-201ENST00000355238 TNRC6AQ8NDV7 1962 aaKnown RBP9.9□□□□□ -0.82
SYNCRIP-201ENST00000355238 CACNA1EQ15878 2313 aa9.9□□□□□ -0.83
SYNCRIP-201ENST00000355238 ANGP03950 147 aaKnown RBP9.89□□□□□ -0.83
SYNCRIP-201ENST00000355238 WFDC9Q8NEX5 89 aa9.89□□□□□ -0.83
SYNCRIP-201ENST00000355238 Q8N1Y9 231 aa9.89□□□□□ -0.83
SYNCRIP-201ENST00000355238 TM2D2Q9BX73 214 aa9.89□□□□□ -0.83
SYNCRIP-201ENST00000355238 TMEM61Q8N0U2 210 aa9.89□□□□□ -0.83
SYNCRIP-201ENST00000355238 COX7B2Q8TF08 81 aa9.89□□□□□ -0.83
SYNCRIP-201ENST00000355238 ARFGEF3Q5TH69 2177 aa9.89□□□□□ -0.83
SYNCRIP-201ENST00000355238 BRK1Q8WUW1 75 aa9.89□□□□□ -0.83
SYNCRIP-201ENST00000355238 SPATA25Q9BR10 227 aa9.89□□□□□ -0.83
SYNCRIP-201ENST00000355238 XCL1P47992 114 aa9.88□□□□□ -0.83
SYNCRIP-201ENST00000355238 RNF152Q8N8N0 203 aa9.88□□□□□ -0.83
SYNCRIP-201ENST00000355238 U3KQE9 123 aa9.88□□□□□ -0.83
SYNCRIP-201ENST00000355238 RNF114Q9Y508 228 aa9.88□□□□□ -0.83
SYNCRIP-201ENST00000355238 THADAQ6YHU6 1953 aa9.88□□□□□ -0.83
SYNCRIP-201ENST00000355238 DOCK10Q96BY6 2186 aa9.88□□□□□ -0.83
SYNCRIP-201ENST00000355238 IGLV11-55A0A075B6I3 123 aa9.87□□□□□ -0.83
SYNCRIP-201ENST00000355238 WI2-2373I1.2A0A1W2PRP0 233 aa9.87□□□□□ -0.83
SYNCRIP-201ENST00000355238 NPBQ8NG41 125 aa9.87□□□□□ -0.83
SYNCRIP-201ENST00000355238 VSIG2Q96IQ7 327 aa9.87□□□□□ -0.83
SYNCRIP-201ENST00000355238 RPL39P62891 51 aaKnown RBP9.87□□□□□ -0.83
SYNCRIP-201ENST00000355238 NREPQ16612 68 aa9.87□□□□□ -0.83
SYNCRIP-201ENST00000355238 LHBP01229 141 aa9.87□□□□□ -0.83
SYNCRIP-201ENST00000355238 C9orf47Q6ZRZ4 202 aa9.87□□□□□ -0.83
SYNCRIP-201ENST00000355238 ELANEP08246 267 aa9.87□□□□□ -0.83
SYNCRIP-201ENST00000355238 EML6Q6ZMW3 1958 aa9.87□□□□□ -0.83
SYNCRIP-201ENST00000355238 DAZ2Q13117 558 aaKnown RBP9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 DAZ4Q86SG3 579 aaKnown RBP9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 DAZ3Q9NR90 486 aaKnown RBP9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 IGHV1-58A0A0C4DH39 117 aa9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 IGLV2-14P01704 120 aa9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 LECT2O14960 151 aa9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 PLXND1Q9Y4D7 1925 aa9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 IGKV1OR2-108A0A075B7D4 117 aa9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 SPRY2O43597 315 aa9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 BUB3O43684 328 aa9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 C3orf22Q8N5N4 141 aa9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 PDE6GP18545 87 aa9.86□□□□□ -0.83
SYNCRIP-201ENST00000355238 TMEM256-PLSCR3K7ERE1 68 aa9.85□□□□□ -0.83
SYNCRIP-201ENST00000355238 RNF138Q8WVD3 245 aa9.85□□□□□ -0.83
SYNCRIP-201ENST00000355238 DOPEY2Q9Y3R5 2298 aa9.85□□□□□ -0.83
SYNCRIP-201ENST00000355238 C5orf38Q86SI9 138 aa9.85□□□□□ -0.83
SYNCRIP-201ENST00000355238 HIST2H2BCQ6DN03 193 aa9.85□□□□□ -0.83
SYNCRIP-201ENST00000355238 C16orf54Q6UWD8 224 aa9.85□□□□□ -0.83
SYNCRIP-201ENST00000355238 RMI2Q96E14 147 aa9.85□□□□□ -0.83
SYNCRIP-201ENST00000355238 HELZP42694 1942 aaKnown RBP9.85□□□□□ -0.83
SYNCRIP-201ENST00000355238 IGLV2-8P01709 118 aa9.84□□□□□ -0.83
SYNCRIP-201ENST00000355238 CTSGP08311 255 aa9.84□□□□□ -0.83
SYNCRIP-201ENST00000355238 DAND5Q8N907 189 aa9.84□□□□□ -0.83
SYNCRIP-201ENST00000355238 CLPSL2Q6UWE3 100 aa9.84□□□□□ -0.83
SYNCRIP-201ENST00000355238 SHANK1Q9Y566 2161 aa9.84□□□□□ -0.83
SYNCRIP-201ENST00000355238 MIAQ16674 131 aa9.84□□□□□ -0.83
SYNCRIP-201ENST00000355238 CTSZQ9UBR2 303 aa9.84□□□□□ -0.83
SYNCRIP-201ENST00000355238 ZNF503Q96F45 646 aa9.83□□□□□ -0.84
SYNCRIP-201ENST00000355238 K7EQD1 137 aa9.83□□□□□ -0.84
SYNCRIP-201ENST00000355238 LOXL1Q08397 574 aaPredicted RBP9.83□□□□□ -0.84
SYNCRIP-201ENST00000355238 DEFB105AQ8NG35 78 aa9.83□□□□□ -0.84
SYNCRIP-201ENST00000355238 IGFL3Q6UXB1 125 aa9.83□□□□□ -0.84
SYNCRIP-201ENST00000355238 PRB1P04280 392 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 IGLC6P0CF74 106 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 GDF5OSQ5U4N7 250 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 NOP10Q9NPE3 64 aaKnown RBP9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 ROS1P08922 2347 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 APOC4P55056 127 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 FAM236DA0A1B0GTK5 79 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 NDUFS5O43920 106 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 FAM236CP0DP71 79 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 HOXB4P17483 251 aaPredicted RBP9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 ZDBF2Q9HCK1 2354 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 NLRC5Q86WI3 1866 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 P0C879 139 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 IGHV3-30-3P0DP02 117 aa9.82□□□□□ -0.84
SYNCRIP-201ENST00000355238 TEX22C9J3V5 150 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 COX7A2LO14548 114 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 TEX49A0A1B0GTD5 131 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 IGHV7-81A0A0B4J1V7 117 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 LY6G6EA0A0G2JKS1 128 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 LY6DQ14210 128 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 ODF3L1Q8IXM7 274 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 TP53TG3Q9ULZ0 132 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 U3KQA8 63 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 J3QLI3 93 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 ATP5EP2Q5VTU8 51 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 CADP27708 2225 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 IGLV2-23P01705 113 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 C20orf203Q8NBC4 194 aa9.81□□□□□ -0.84
SYNCRIP-201ENST00000355238 MDFICQ9P1T7 246 aa9.8□□□□□ -0.84
SYNCRIP-201ENST00000355238 MBD6Q96DN6 1003 aa9.8□□□□□ -0.84
SYNCRIP-201ENST00000355238 ETDCA0A1B0GVM5 59 aa9.8□□□□□ -0.84
SYNCRIP-201ENST00000355238 C14orf132Q9NPU4 83 aa9.8□□□□□ -0.84
SYNCRIP-201ENST00000355238 FNDC1Q4ZHG4 1894 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms