RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 H3BVH4 76 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 HOXA3O43365 443 aaPredicted RBP8.39□□□□□ -1.07
SND1-201ENST00000354725 SCGB1C2P0DMR2 95 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 MRPL36Q9P0J6 103 aaKnown RBP8.39□□□□□ -1.07
SND1-201ENST00000354725 LOC107984156A0A0G2JMH3 177 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 VCYO14598 125 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 ARL17AQ8IVW1 177 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 FAM216BQ8N7L0 139 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 MRPL20Q9BYC9 149 aaKnown RBP8.39□□□□□ -1.07
SND1-201ENST00000354725 EPDR1Q9UM22 224 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 AMMECR1Q9Y4X0 333 aaPredicted RBP8.39□□□□□ -1.07
SND1-201ENST00000354725 TMEM178BH3BS89 294 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 RUSC1-AS1Q66K80 236 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 ZNF492Q9P255 531 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 NBASA2RRP1 2371 aa8.39□□□□□ -1.07
SND1-201ENST00000354725 PDPNQ86YL7 162 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 IGFBPL1Q8WX77 278 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 DKK2Q9UBU2 259 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 OTOGQ6ZRI0 2925 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 C17orf100A8MU93 164 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 FCER1GP30273 86 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 ZNF493Q6ZR52 646 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 PRSS3P2Q8NHM4 247 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 C10orf105Q8TEF2 133 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 C16orf92Q96LL3 132 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 HIST1H4GQ99525 98 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 UNC79Q9P2D8 2635 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 NAV3Q8IVL0 2385 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 TRBV6-1A0A0K0K1D8 114 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 GP9P14770 177 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 UBE2L3P68036 154 aaKnown RBP8.38□□□□□ -1.07
SND1-201ENST00000354725 OR11H6Q8NGC7 330 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 GFRA4Q9GZZ7 299 aa8.38□□□□□ -1.07
SND1-201ENST00000354725 AGRNO00468 2067 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 TRAV2A0A0B4J234 112 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 PYYP10082 97 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 UBE2D3P61077 147 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 UBE2D2P62837 147 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 CCL13Q99616 98 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 J3QQQ9 107 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 CD164Q04900 197 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 LINC00322Q6ZN03 302 aaPredicted RBP8.37□□□□□ -1.07
SND1-201ENST00000354725 APRG1Q8IVJ8 170 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 RITA1Q96K30 269 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 PAXXQ9BUH6 204 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 PYGO1Q9Y3Y4 419 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 ITPR2Q14571 2701 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 A0A1W2PPR1 153 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 M0R1B8 84 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 TMEM190Q8WZ59 177 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 BAHCC1Q9P281 2608 aa8.37□□□□□ -1.07
SND1-201ENST00000354725 PTPN13Q12923 2485 aa8.36□□□□□ -1.07
SND1-201ENST00000354725 C10orf113Q5VZT2 155 aa8.36□□□□□ -1.07
SND1-201ENST00000354725 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
SND1-201ENST00000354725 DPH3Q96FX2 82 aa8.36□□□□□ -1.07
SND1-201ENST00000354725 TRGV9Q99603 122 aa8.36□□□□□ -1.07
SND1-201ENST00000354725 HHLA3Q9XRX5 114 aa8.36□□□□□ -1.07
SND1-201ENST00000354725 TRBV7-3A0A075B6L6 115 aa8.36□□□□□ -1.07
SND1-201ENST00000354725 TRAV8-4A0A0B4J246 113 aa8.36□□□□□ -1.07
SND1-201ENST00000354725 TCL1BO95988 128 aa8.36□□□□□ -1.07
SND1-201ENST00000354725 LOXL1Q08397 574 aaPredicted RBP8.36□□□□□ -1.07
SND1-201ENST00000354725 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
SND1-201ENST00000354725 IGLV2-11P01706 119 aa8.35□□□□□ -1.07
SND1-201ENST00000354725 TMEM200BQ69YZ2 307 aa8.35□□□□□ -1.07
SND1-201ENST00000354725 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
SND1-201ENST00000354725 HLA-DRB4P13762 266 aa8.35□□□□□ -1.07
SND1-201ENST00000354725 ERHP84090 104 aaKnown RBP8.35□□□□□ -1.07
SND1-201ENST00000354725 HLA-DRB4X5D2U9 266 aa8.35□□□□□ -1.07
SND1-201ENST00000354725 PCNX1Q96RV3 2341 aa8.35□□□□□ -1.07
SND1-201ENST00000354725 ZFHX3Q15911 3703 aa8.35□□□□□ -1.07
SND1-201ENST00000354725 SETXQ7Z333 2677 aaKnown RBP8.35□□□□□ -1.07
SND1-201ENST00000354725 LINC01549A6NIU2 74 aa8.35□□□□□ -1.07
SND1-201ENST00000354725 TRBV7-7A0A0K0K1E9 115 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 SHISA9B4DS77 424 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 C9orf139Q6ZV77 190 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 FMC1Q96HJ9 113 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 KAAG1Q9UBP8 84 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 CELSR1Q9NYQ6 3014 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 FAM240AA0A1B0GVK7 77 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 NPYP01303 97 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 Q8N1Y9 231 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 MAPKAPK5-AS1Q8N8E1 139 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 COX7A2P2O60397 106 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 CNTFRP26992 372 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 LINC00305Q7Z4B0 112 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 POM121L12Q8N7R1 296 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 RPP21Q9H633 154 aaKnown RBP8.34□□□□□ -1.07
SND1-201ENST00000354725 TMEM14CQ9P0S9 112 aa8.34□□□□□ -1.07
SND1-201ENST00000354725 IGF1P05019 195 aa8.33□□□□□ -1.08
SND1-201ENST00000354725 IFI27P40305 119 aaPredicted RBP8.33□□□□□ -1.08
SND1-201ENST00000354725 UBE2E1P51965 193 aa8.33□□□□□ -1.08
SND1-201ENST00000354725 LINC01560Q8TB33 94 aa8.33□□□□□ -1.08
SND1-201ENST00000354725 UBE2E2Q96LR5 201 aa8.33□□□□□ -1.08
SND1-201ENST00000354725 RP1L1Q8IWN7 2480 aaPredicted RBP8.33□□□□□ -1.08
SND1-201ENST00000354725 HAX1O00165 279 aa8.33□□□□□ -1.08
SND1-201ENST00000354725 OVOL1O14753 267 aa8.33□□□□□ -1.08
SND1-201ENST00000354725 PRR26Q8N8Z3 221 aa8.33□□□□□ -1.08
SND1-201ENST00000354725 CADP27708 2225 aa8.33□□□□□ -1.08
SND1-201ENST00000354725 WI2-2373I1.2A0A1W2PRP0 233 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms