RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 RNASE3P12724 160 aaKnown RBP8.62□□□□□ -1.03
CAPN9-202ENST00000354537 LINC00315P59091 139 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 SLC25A29Q8N8R3 303 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 MOB4Q9Y3A3 225 aa8.62□□□□□ -1.03
CAPN9-202ENST00000354537 IGF1P05019 195 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 INSL3P51460 131 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 CKS1BP61024 79 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 TEN1Q86WV5 123 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 CDIP1Q9H305 208 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 TRBV6-5A0A0K0K1A5 114 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 PSMB2P49721 201 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 CRYBA4P53673 196 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 ZFP2Q6ZN57 461 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 ZNF418Q8TF45 676 aaPredicted RBP8.61□□□□□ -1.03
CAPN9-202ENST00000354537 USMG5Q96IX5 58 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 ZFHX4Q86UP3 3567 aa8.61□□□□□ -1.03
CAPN9-202ENST00000354537 DUSP14O95147 198 aaKnown RBP8.6□□□□□ -1.03
CAPN9-202ENST00000354537 TSHBP01222 138 aa8.6□□□□□ -1.03
CAPN9-202ENST00000354537 SYT8Q8NBV8 401 aa8.6□□□□□ -1.03
CAPN9-202ENST00000354537 AGRNO00468 2067 aa8.6□□□□□ -1.03
CAPN9-202ENST00000354537 ZZEF1O43149 2961 aa8.6□□□□□ -1.03
CAPN9-202ENST00000354537 IGHV3-30P01768 117 aa8.6□□□□□ -1.03
CAPN9-202ENST00000354537 IGHV3-30-5P0DP03 117 aa8.6□□□□□ -1.03
CAPN9-202ENST00000354537 RNASE4P34096 147 aaKnown RBP8.6□□□□□ -1.03
CAPN9-202ENST00000354537 ADORA2A-AS1P86434 159 aa8.6□□□□□ -1.03
CAPN9-202ENST00000354537 KIR2DL4Q99706 377 aa8.6□□□□□ -1.03
CAPN9-202ENST00000354537 LOC107984156A0A0G2JMH3 177 aa8.59□□□□□ -1.03
CAPN9-202ENST00000354537 NFE4Q86UQ8 179 aa8.59□□□□□ -1.03
CAPN9-202ENST00000354537 ARL17AQ8IVW1 177 aa8.59□□□□□ -1.03
CAPN9-202ENST00000354537 C10orf126Q8N4M7 172 aa8.59□□□□□ -1.03
CAPN9-202ENST00000354537 TP53TG1Q9Y2A0 90 aa8.59□□□□□ -1.03
CAPN9-202ENST00000354537 ZFHX2Q9C0A1 2572 aaPredicted RBP8.59□□□□□ -1.03
CAPN9-202ENST00000354537 KLLNB2CW77 178 aa8.59□□□□□ -1.03
CAPN9-202ENST00000354537 GNRH2O43555 120 aa8.59□□□□□ -1.03
CAPN9-202ENST00000354537 ZNF876PQ49A33 203 aa8.59□□□□□ -1.03
CAPN9-202ENST00000354537 TRBV27A0A0K0K1C4 114 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 A8MWV9 139 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 LMO4P61968 165 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 KLHL30-AS1Q8NEE0 82 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 CFAP47Q6ZTR5 3102 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 ZNF318Q5VUA4 2279 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 LAMA5O15230 3695 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 POLEQ07864 2286 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 TMEM262E9PQX1 116 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 LGALS9O00182 355 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 IGHV1-69P01742 117 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 CFC1BP0CG36 223 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 CFC1P0CG37 223 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 TCF15Q12870 199 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 PRO1854Q9UHT4 67 aa8.58□□□□□ -1.04
CAPN9-202ENST00000354537 SPINK8P0C7L1 97 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 RHOHQ15669 191 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 UNQ9165/PRO28630Q6UXU0 137 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 CARD19Q96LW7 228 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 LINC01600Q96MT4 127 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 ARHGAP32A7KAX9 2087 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 APC2O95996 2303 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 J3KRW8 73 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 TCL1BO95988 128 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 SUMO4Q6EEV6 95 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 Q6ZUT4 128 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 AMELXQ99217 191 aa8.57□□□□□ -1.04
CAPN9-202ENST00000354537 LEPROTO15243 131 aa8.56□□□□□ -1.04
CAPN9-202ENST00000354537 CDSNQ15517 529 aa8.56□□□□□ -1.04
CAPN9-202ENST00000354537 FAM159AQ6UWV7 190 aa8.56□□□□□ -1.04
CAPN9-202ENST00000354537 ODF3Q96PU9 254 aa8.56□□□□□ -1.04
CAPN9-202ENST00000354537 PCNX1Q96RV3 2341 aa8.56□□□□□ -1.04
CAPN9-202ENST00000354537 J3QQQ9 107 aa8.56□□□□□ -1.04
CAPN9-202ENST00000354537 ZNF688P0C7X2 276 aa8.56□□□□□ -1.04
CAPN9-202ENST00000354537 NSUN5P1Q3KNT7 163 aa8.56□□□□□ -1.04
CAPN9-202ENST00000354537 GEMIN7Q9H840 131 aaKnown RBP8.56□□□□□ -1.04
CAPN9-202ENST00000354537 CEP250Q9BV73 2442 aa8.56□□□□□ -1.04
CAPN9-202ENST00000354537 A0A0J9YX75 114 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 K7EMT4 169 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 P0DMU3 169 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 FAM231AP0DMU4 169 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 FAM231CP0DMU5 169 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 LGALS3P17931 250 aaKnown RBP8.55□□□□□ -1.04
CAPN9-202ENST00000354537 ID1P41134 155 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 SMG1Q96Q15 3661 aaKnown RBP8.55□□□□□ -1.04
CAPN9-202ENST00000354537 A0A0B4J2C4 111 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 SDHAF1A6NFY7 115 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 SPRY2O43597 315 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 NBL1P41271 181 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 ZNRF2Q8NHG8 242 aa8.55□□□□□ -1.04
CAPN9-202ENST00000354537 RIF1Q5UIP0 2472 aaKnown RBP8.54□□□□□ -1.04
CAPN9-202ENST00000354537 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
CAPN9-202ENST00000354537 KLRB1Q12918 225 aa8.54□□□□□ -1.04
CAPN9-202ENST00000354537 TMEM170BQ5T4T1 132 aa8.54□□□□□ -1.04
CAPN9-202ENST00000354537 CNOT1A5YKK6 2376 aaKnown RBP8.54□□□□□ -1.04
CAPN9-202ENST00000354537 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.54□□□□□ -1.04
CAPN9-202ENST00000354537 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
CAPN9-202ENST00000354537 IGHG2P01859 326 aa8.54□□□□□ -1.04
CAPN9-202ENST00000354537 Q6ZS46 218 aa8.54□□□□□ -1.04
CAPN9-202ENST00000354537 C9orf85Q96MD7 179 aa8.54□□□□□ -1.04
CAPN9-202ENST00000354537 RHPN1-AS1Q9BWJ2 59 aa8.54□□□□□ -1.04
CAPN9-202ENST00000354537 TRBV12-3P01733 135 aa8.53□□□□□ -1.04
CAPN9-202ENST00000354537 MT-ATP8P03928 68 aa8.53□□□□□ -1.04
CAPN9-202ENST00000354537 SCGB1C2P0DMR2 95 aa8.53□□□□□ -1.04
CAPN9-202ENST00000354537 MDFICQ9P1T7 246 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms