RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ZFAND3Q9H8U3 227 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 C11orf21Q9P2W6 132 aa6.54□□□□□ -1.36
TRIM55-204ENST00000353317 IGLV2-18A0A075B6J9 118 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 IGKCP01834 107 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 TRGV3P03979 118 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 CLEC3BP05452 202 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 HIST2H2BDQ6DRA6 164 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 GTSCR1Q86UQ5 136 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 TRBV25-1A0A075B6N4 114 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 IGHV3OR16-13A0A075B7E8 117 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 IGHV3-74A0A0B4J1X5 117 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 TRBV12-3P01733 135 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 ZNF502Q8TBZ5 544 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 ESM1Q9NQ30 184 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 HIGD1BQ9P298 99 aa6.53□□□□□ -1.36
TRIM55-204ENST00000353317 TRAV26-2A0A0B4J265 109 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 CLPSL1A2RUU4 121 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 K7ERJ3 54 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 SCGB2A1O75556 95 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 SMIM13P0DJ93 91 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 CFHR3Q02985 330 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 SAMD5Q5TGI4 173 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 Q6ZQT7 251 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 OR5A1Q8NGJ0 315 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 AGPAT4-IT1Q9H0P7 198 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 VPREB3Q9UKI3 123 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 RBAKDNA6NC62 111 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 SMIM17P0DL12 118 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 FABP2P12104 132 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 Q8N8P6 123 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 YAE1D1Q9NRH1 226 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 TMEM160Q9NX00 188 aa6.52□□□□□ -1.37
TRIM55-204ENST00000353317 NIPBLQ6KC79 2804 aaeCLIP6.52□□□□□ -1.37
TRIM55-204ENST00000353317 IGHV7-4-1A0A0J9YVY3 117 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 K7EMI3 77 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 DPM2O94777 84 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 CLEC19AQ6UXS0 136 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 NRACQ8N912 160 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 PHLDA1Q8WV24 401 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-204ENST00000353317 ZNF702PQ9H963 129 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 MRPL35Q9NZE8 188 aaKnown RBP6.51□□□□□ -1.37
TRIM55-204ENST00000353317 IGHV3-49A0A0A0MS15 119 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 TRAV8-2A0A0B4J237 113 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 ATP5LO75964 103 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 IGLV1-40P01703 118 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 PSMG4Q5JS54 123 aa6.51□□□□□ -1.37
TRIM55-204ENST00000353317 IGHV3-11P01762 117 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 MAPKAPK5-AS1Q8N8E1 139 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 SLC50A1Q9BRV3 221 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 SMPXQ9UHP9 88 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 F8P00451 2351 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 CYSRT1A8MQ03 144 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 ZNF207O43670 478 aaKnown RBP6.5□□□□□ -1.37
TRIM55-204ENST00000353317 RAB9AP51151 201 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 CEND1Q8N111 149 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 TM2D2Q9BX73 214 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 NHP2Q9NX24 153 aaKnown RBP6.5□□□□□ -1.37
TRIM55-204ENST00000353317 UFC1Q9Y3C8 167 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 WNK1Q9H4A3 2382 aa6.5□□□□□ -1.37
TRIM55-204ENST00000353317 TEP1Q99973 2627 aaKnown RBP6.5□□□□□ -1.37
TRIM55-204ENST00000353317 PRSS47A8MTI9 375 aa6.49□□□□□ -1.37
TRIM55-204ENST00000353317 LY6G6DO95868 133 aa6.49□□□□□ -1.37
TRIM55-204ENST00000353317 LAGE3Q14657 143 aa6.49□□□□□ -1.37
TRIM55-204ENST00000353317 TMEM78Q5T7P6 136 aa6.49□□□□□ -1.37
TRIM55-204ENST00000353317 PF4V1P10720 104 aa6.49□□□□□ -1.37
TRIM55-204ENST00000353317 C8orf86Q6ZUL3 223 aa6.49□□□□□ -1.37
TRIM55-204ENST00000353317 MYOZ3Q8TDC0 251 aa6.49□□□□□ -1.37
TRIM55-204ENST00000353317 SORL1Q92673 2214 aa6.49□□□□□ -1.37
TRIM55-204ENST00000353317 DNAJC9-AS1A6NH13 148 aa6.48□□□□□ -1.37
TRIM55-204ENST00000353317 PSMB8P28062 276 aa6.48□□□□□ -1.37
TRIM55-204ENST00000353317 SPANXN1Q5VSR9 72 aa6.48□□□□□ -1.37
TRIM55-204ENST00000353317 A0A087WX48 190 aa6.48□□□□□ -1.37
TRIM55-204ENST00000353317 TEX48A0A1B0GUV7 120 aa6.48□□□□□ -1.37
TRIM55-204ENST00000353317 HLA-DRB4P13762 266 aa6.48□□□□□ -1.37
TRIM55-204ENST00000353317 EDN2P20800 178 aa6.48□□□□□ -1.37
TRIM55-204ENST00000353317 ATP5G2Q06055 141 aa6.48□□□□□ -1.37
TRIM55-204ENST00000353317 PRR9Q5T870 116 aa6.48□□□□□ -1.37
TRIM55-204ENST00000353317 HLA-DRB4X5D2U9 266 aa6.48□□□□□ -1.37
TRIM55-204ENST00000353317 IGHV4-4A0A075B6R2 117 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 H3BVH4 76 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
TRIM55-204ENST00000353317 UNQ9165/PRO28630Q6UXU0 137 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 C9orf47Q6ZRZ4 202 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 C2CD3Q4AC94 2353 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 TMEM238C9JI98 176 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 SPRY2O43597 315 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 C18orf65Q6ZTR6 163 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 EEF1AKMT3Q96AZ1 226 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 METTL26Q96S19 204 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 JMJD1CQ15652 2540 aa6.47□□□□□ -1.37
TRIM55-204ENST00000353317 TRBV7-1A0A0A6YYK4 115 aa6.46□□□□□ -1.37
TRIM55-204ENST00000353317 IGLL5B9A064 214 aa6.46□□□□□ -1.37
TRIM55-204ENST00000353317 E9PLD3 99 aa6.46□□□□□ -1.37
TRIM55-204ENST00000353317 TCTEX1D4Q5JR98 221 aa6.46□□□□□ -1.37
TRIM55-204ENST00000353317 TENM1Q9UKZ4 2725 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 FAM223BA6NKX1 122 aa6.46□□□□□ -1.38
TRIM55-204ENST00000353317 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms