RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 J3KRW8 73 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 CCL24O00175 119 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 CRXO43186 299 aaPredicted RBP5.13□□□□□ -1.59
TRIM55-203ENST00000350034 GNRH2O43555 120 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 EVI2AP22794 236 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 TSPOP30536 169 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 CKS2P33552 79 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 PROK1P58294 105 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 KRTDAPP60985 99 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 SSTP61278 116 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 KHDC1LQ5JSQ8 128 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 POM121L12Q8N7R1 296 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 CLUHP3Q96NS8 147 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 JMJD8Q96S16 334 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 CITED2Q99967 270 aaPredicted RBP5.13□□□□□ -1.59
TRIM55-203ENST00000350034 AP5S1Q9NUS5 200 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 TSSC4Q9Y5U2 329 aaPredicted RBP5.13□□□□□ -1.59
TRIM55-203ENST00000350034 ANK2Q01484 3957 aa5.13□□□□□ -1.59
TRIM55-203ENST00000350034 IGLV2-18A0A075B6J9 118 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 A0A096LNJ9 63 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 TSTD3H0UI37 97 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 SMKR1H3BMG3 65 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 H3BMM0 161 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 TCF21O43680 179 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 GAS8-AS1O95177 125 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 HLA-DRB4P13762 266 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 BTF3P20290 206 aaKnown RBP5.12□□□□□ -1.59
TRIM55-203ENST00000350034 IFI27P40305 119 aaPredicted RBP5.12□□□□□ -1.59
TRIM55-203ENST00000350034 CDKN1BP46527 198 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 DEFB131AP59861 70 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 PMCHL1Q16048 86 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 SPANXN1Q5VSR9 72 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 FA2HQ7L5A8 372 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 NRACQ8N912 160 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 PRSS3P2Q8NHM4 247 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 MRAP2Q96G30 205 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 C9orf85Q96MD7 179 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 SPAG8Q99932 426 aaPredicted RBP5.12□□□□□ -1.59
TRIM55-203ENST00000350034 C20orf144Q9BQM9 153 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 PRO1933Q9H354 126 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 ZNF256Q9Y2P7 627 aaPredicted RBP5.12□□□□□ -1.59
TRIM55-203ENST00000350034 HLA-DRB4X5D2U9 266 aa5.12□□□□□ -1.59
TRIM55-203ENST00000350034 TRAV12-3A0A0B4J271 114 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 IGHV3-16A0A0C4DH30 117 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 RBMY1BA6NDE4 496 aaKnown RBP5.11□□□□□ -1.59
TRIM55-203ENST00000350034 RBMY1EA6NEQ0 496 aaKnown RBP5.11□□□□□ -1.59
TRIM55-203ENST00000350034 KNCNA6PVL3 124 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 LEPROTL1O95214 131 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 TNFRSF6BO95407 300 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 NCR2O95944 276 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 RBMY1DP0C7P1 496 aaKnown RBP5.11□□□□□ -1.59
TRIM55-203ENST00000350034 FOSL1P15407 271 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 GATA1P15976 413 aaPredicted RBP5.11□□□□□ -1.59
TRIM55-203ENST00000350034 S100A4P26447 101 aaKnown RBP5.11□□□□□ -1.59
TRIM55-203ENST00000350034 DDTP30046 118 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 LINC00315P59091 139 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 CD300EQ496F6 205 aaPredicted RBP5.11□□□□□ -1.59
TRIM55-203ENST00000350034 FAM159AQ6UWV7 190 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 LINC00173Q6ZV60 143 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 SMIM15Q7Z3B0 74 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 SPATA12Q7Z6I5 190 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 OR2K2Q8NGT1 345 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 DYNLRB2Q8TF09 96 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 ZNF747Q9BV97 191 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 MAP1LC3AQ9H492 121 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 MAP6D1Q9H9H5 199 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 NXT2Q9NPJ8 142 aaKnown RBP5.11□□□□□ -1.59
TRIM55-203ENST00000350034 HSPB8Q9UJY1 196 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 KIF25-AS1Q9Y6Z4 181 aa5.11□□□□□ -1.59
TRIM55-203ENST00000350034 IGHV1OR15-1A0A075B7D0 117 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 LOC389332A0A1B0GUA5 103 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 A0A1W2PRX2 142 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 OR4C46A6NHA9 309 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 SYS1-DBNDD2H3BUS1 97 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 M0R381 172 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 SPRY2O43597 315 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 SPINK13Q1W4C9 94 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 PET117Q6UWS5 81 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 Q8N8P6 123 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 C11orf44Q8N8P7 122 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 LINC00467Q9BRT7 94 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 TMEM70Q9BUB7 260 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 DPH3P1Q9H4G8 78 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 PHLDA3Q9Y5J5 127 aa5.1□□□□□ -1.59
TRIM55-203ENST00000350034 TRAV12-2A0A075B6T6 113 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 IGKV3-20P01619 116 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 HBDP02042 147 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 CD7P09564 240 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 RBMY1A1P0DJD3 496 aaKnown RBP5.09□□□□□ -1.59
TRIM55-203ENST00000350034 RBMY1CP0DJD4 496 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 KRTAP10-3P60369 221 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 RBMY1FQ15415 496 aaKnown RBP5.09□□□□□ -1.59
TRIM55-203ENST00000350034 ODF3L2Q3SX64 289 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 LINC01545Q5VT33 79 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 RASL10AQ92737 203 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 AP1S3Q96PC3 154 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 NDUFAF3Q9BU61 184 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 VAMP8Q9BV40 100 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 MDFICQ9P1T7 246 aa5.09□□□□□ -1.59
TRIM55-203ENST00000350034 TIMM8BQ9Y5J9 83 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms