RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
TNFSF13-202ENST00000349228 PSMB8P28062 276 aa11.65□□□□□ -0.54
TNFSF13-202ENST00000349228 Q6ZS46 218 aa11.65□□□□□ -0.54
TNFSF13-202ENST00000349228 LINC01356Q8N9X3 169 aa11.65□□□□□ -0.54
TNFSF13-202ENST00000349228 MRPL35Q9NZE8 188 aaKnown RBP11.65□□□□□ -0.54
TNFSF13-202ENST00000349228 RNASE3P12724 160 aaKnown RBP11.65□□□□□ -0.54
TNFSF13-202ENST00000349228 GAGE10A6NGK3 116 aa11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 TAL2Q16559 108 aa11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 C14orf178Q8N769 122 aaPredicted RBP11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 SCGB3A1Q96QR1 104 aa11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 RELNP78509 3460 aa11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 IGKV2D-26A0A0A0MRZ7 120 aa11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 F8VRH5 84 aa11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 AVPP01185 164 aa11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 FAM159AQ6UWV7 190 aa11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 GTSCR1Q86UQ5 136 aa11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 DCANP1Q8TF63 244 aa11.64□□□□□ -0.55
TNFSF13-202ENST00000349228 IGHV4OR15-8A0A075B7B6 117 aa11.63□□□□□ -0.55
TNFSF13-202ENST00000349228 A0A087WW49 117 aa11.63□□□□□ -0.55
TNFSF13-202ENST00000349228 F6UB75 175 aa11.63□□□□□ -0.55
TNFSF13-202ENST00000349228 GNRH2O43555 120 aa11.63□□□□□ -0.55
TNFSF13-202ENST00000349228 SMIM13P0DJ93 91 aa11.63□□□□□ -0.55
TNFSF13-202ENST00000349228 TCTAP57738 103 aa11.62□□□□□ -0.55
TNFSF13-202ENST00000349228 ERASQ7Z444 233 aa11.62□□□□□ -0.55
TNFSF13-202ENST00000349228 CHAC1Q9BUX1 264 aa11.62□□□□□ -0.55
TNFSF13-202ENST00000349228 TRBV25-1A0A075B6N4 114 aa11.62□□□□□ -0.55
TNFSF13-202ENST00000349228 MGPP08493 103 aa11.62□□□□□ -0.55
TNFSF13-202ENST00000349228 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
TNFSF13-202ENST00000349228 IGKV3-7A0A075B6H7 116 aa11.61□□□□□ -0.55
TNFSF13-202ENST00000349228 LCNL1Q6ZST4 164 aa11.61□□□□□ -0.55
TNFSF13-202ENST00000349228 TM2D2Q9BX73 214 aa11.61□□□□□ -0.55
TNFSF13-202ENST00000349228 DEFB1P60022 68 aa11.6□□□□□ -0.55
TNFSF13-202ENST00000349228 SNRPD3P62318 126 aaKnown RBP11.6□□□□□ -0.55
TNFSF13-202ENST00000349228 DEFB112Q30KQ8 113 aa11.6□□□□□ -0.55
TNFSF13-202ENST00000349228 UFSP1Q6NVU6 142 aa11.6□□□□□ -0.55
TNFSF13-202ENST00000349228 NEXN-AS1Q8NBZ9 246 aa11.6□□□□□ -0.55
TNFSF13-202ENST00000349228 CST9LQ9H4G1 147 aa11.6□□□□□ -0.55
TNFSF13-202ENST00000349228 KIF25-AS1Q9Y6Z4 181 aa11.6□□□□□ -0.55
TNFSF13-202ENST00000349228 GAGE12BA1L429 117 aa11.6□□□□□ -0.55
TNFSF13-202ENST00000349228 LINC01619G3V211 115 aa11.6□□□□□ -0.55
TNFSF13-202ENST00000349228 H3BUT2 72 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 K7EP34 96 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 LGALS9O00182 355 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 IGHV4-59P01825 116 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 C2orf66Q6UXQ4 117 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 OR5A1Q8NGJ0 315 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 RPL39LQ96EH5 51 aaKnown RBP11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 CACNA1BQ00975 2339 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 RNF223E7ERA6 249 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 ELANEP08246 267 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 GCSHP23434 173 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 LINC00315P59091 139 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 CEND1Q8N111 149 aa11.59□□□□□ -0.55
TNFSF13-202ENST00000349228 TRAV26-1A0A087WT03 109 aa11.58□□□□□ -0.56
TNFSF13-202ENST00000349228 A0A1W2PPM0 123 aa11.58□□□□□ -0.56
TNFSF13-202ENST00000349228 SPTBN4Q9H254 2564 aa11.58□□□□□ -0.56
TNFSF13-202ENST00000349228 VCYO14598 125 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 DUSP14O95147 198 aaKnown RBP11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 SRD5A1P18405 259 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 C5orf47Q569G3 176 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 PAPPA-AS1Q5QFB9 102 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 SYT8Q8NBV8 401 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 CYSLTR1Q9Y271 337 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 A0A096LNT2 108 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 A0A0J9YX75 114 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 K7EQG2 157 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 FABP2P12104 132 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 OCIAD2Q56VL3 154 aa11.57□□□□□ -0.56
TNFSF13-202ENST00000349228 TRBV6-5A0A0K0K1A5 114 aa11.56□□□□□ -0.56
TNFSF13-202ENST00000349228 OR11H12B2RN74 326 aa11.56□□□□□ -0.56
TNFSF13-202ENST00000349228 LGALS1P09382 135 aaKnown RBP11.56□□□□□ -0.56
TNFSF13-202ENST00000349228 CD7P09564 240 aa11.56□□□□□ -0.56
TNFSF13-202ENST00000349228 POLR2KP53803 58 aaKnown RBP11.56□□□□□ -0.56
TNFSF13-202ENST00000349228 OR11H1Q8NG94 326 aa11.56□□□□□ -0.56
TNFSF13-202ENST00000349228 OR11H2Q8NH07 326 aa11.56□□□□□ -0.56
TNFSF13-202ENST00000349228 BAALCQ8WXS3 180 aa11.56□□□□□ -0.56
TNFSF13-202ENST00000349228 C9orf85Q96MD7 179 aa11.56□□□□□ -0.56
TNFSF13-202ENST00000349228 K7ERU9 68 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 SPRY2O43597 315 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 FXYD2P54710 66 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 SAMD5Q5TGI4 173 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 TMEM141Q96I45 108 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 JMJD8Q96S16 334 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 VPREB3Q9UKI3 123 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 MAPKAPK5-AS1Q8N8E1 139 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 RAB37Q96AX2 223 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 KIR2DL4Q99706 377 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 TTTY13Q9BZ97 58 aa11.55□□□□□ -0.56
TNFSF13-202ENST00000349228 AKAP6Q13023 2319 aa11.54□□□□□ -0.56
TNFSF13-202ENST00000349228 MYMXA0A1B0GTQ4 84 aa11.54□□□□□ -0.56
TNFSF13-202ENST00000349228 PRSS29PA6NIE9 313 aa11.54□□□□□ -0.56
TNFSF13-202ENST00000349228 E9PLD3 99 aa11.54□□□□□ -0.56
TNFSF13-202ENST00000349228 UBE2E2Q96LR5 201 aa11.54□□□□□ -0.56
TNFSF13-202ENST00000349228 NCOR2Q9Y618 2525 aa11.54□□□□□ -0.56
TNFSF13-202ENST00000349228 IGHV3-16A0A0C4DH30 117 aa11.53□□□□□ -0.56
TNFSF13-202ENST00000349228 FSHBP01225 129 aa11.53□□□□□ -0.56
TNFSF13-202ENST00000349228 ZNF688P0C7X2 276 aa11.53□□□□□ -0.56
TNFSF13-202ENST00000349228 SUMO4Q6EEV6 95 aa11.53□□□□□ -0.56
TNFSF13-202ENST00000349228 SPCS1Q9Y6A9 102 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms