RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 MS4A6AQ9H2W1 248 aa10.15□□□□□ -0.79
CASC4-202ENST00000345795 NPSP0C0P6 89 aa10.14□□□□□ -0.79
CASC4-202ENST00000345795 NPC2P61916 151 aa10.14□□□□□ -0.79
CASC4-202ENST00000345795 PCP2Q8IVA1 136 aa10.14□□□□□ -0.79
CASC4-202ENST00000345795 CSTL1Q9H114 145 aa10.14□□□□□ -0.79
CASC4-202ENST00000345795 IGHV7-4-1A0A0J9YVY3 117 aa10.14□□□□□ -0.79
CASC4-202ENST00000345795 SLC25A16P16260 332 aa10.14□□□□□ -0.79
CASC4-202ENST00000345795 Q8N6K4 173 aa10.14□□□□□ -0.79
CASC4-202ENST00000345795 DEFB113Q30KQ7 82 aa10.14□□□□□ -0.79
CASC4-202ENST00000345795 Q6AWC8 147 aa10.14□□□□□ -0.79
CASC4-202ENST00000345795 PIFOQ8TCI5 191 aa10.14□□□□□ -0.79
CASC4-202ENST00000345795 USMG5Q96IX5 58 aa10.13□□□□□ -0.79
CASC4-202ENST00000345795 PRSS2P07478 247 aa10.13□□□□□ -0.79
CASC4-202ENST00000345795 CLPSL1A2RUU4 121 aa10.13□□□□□ -0.79
CASC4-202ENST00000345795 TMEM8BA6NDV4 472 aa10.13□□□□□ -0.79
CASC4-202ENST00000345795 SMPXQ9UHP9 88 aa10.13□□□□□ -0.79
CASC4-202ENST00000345795 NDUFA4O00483 81 aa10.12□□□□□ -0.79
CASC4-202ENST00000345795 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
CASC4-202ENST00000345795 IGHG2P01859 326 aa10.12□□□□□ -0.79
CASC4-202ENST00000345795 RPL24P83731 157 aaKnown RBP10.12□□□□□ -0.79
CASC4-202ENST00000345795 ANKRD39Q53RE8 183 aa10.12□□□□□ -0.79
CASC4-202ENST00000345795 OR1N2Q8NGR9 330 aa10.12□□□□□ -0.79
CASC4-202ENST00000345795 VPREB3Q9UKI3 123 aa10.12□□□□□ -0.79
CASC4-202ENST00000345795 HIST1H4GQ99525 98 aa10.12□□□□□ -0.79
CASC4-202ENST00000345795 SPOCK3Q9BQ16 436 aa10.12□□□□□ -0.79
CASC4-202ENST00000345795 TRAV8-2A0A0B4J237 113 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 H3BUT2 72 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 K7EP13 123 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 PF4P02776 101 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 CHCHD1Q96BP2 118 aaKnown RBP10.11□□□□□ -0.79
CASC4-202ENST00000345795 STAB1Q9NY15 2570 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 A0A1B0GXF2 115 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 HTN3P15516 51 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 NUTF2P61970 127 aaKnown RBP10.11□□□□□ -0.79
CASC4-202ENST00000345795 PAX2Q02962 417 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 KIR2DL4Q99706 377 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 NHP2Q9NX24 153 aaKnown RBP10.11□□□□□ -0.79
CASC4-202ENST00000345795 A6NDX4 124 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.11□□□□□ -0.79
CASC4-202ENST00000345795 TMEM97Q5BJF2 176 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 TEX43Q6ZNM6 134 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 VPS25Q9BRG1 176 aa10.11□□□□□ -0.79
CASC4-202ENST00000345795 OVOL1O14753 267 aa10.1□□□□□ -0.79
CASC4-202ENST00000345795 APOMO95445 188 aa10.1□□□□□ -0.79
CASC4-202ENST00000345795 TMEM190Q8WZ59 177 aa10.1□□□□□ -0.79
CASC4-202ENST00000345795 MRPL35Q9NZE8 188 aaKnown RBP10.1□□□□□ -0.79
CASC4-202ENST00000345795 P0DMU3 169 aa10.1□□□□□ -0.79
CASC4-202ENST00000345795 FAM231AP0DMU4 169 aa10.1□□□□□ -0.79
CASC4-202ENST00000345795 FAM231CP0DMU5 169 aa10.1□□□□□ -0.79
CASC4-202ENST00000345795 CT83Q5H943 113 aa10.1□□□□□ -0.79
CASC4-202ENST00000345795 URB1-AS1Q96HZ7 61 aa10.1□□□□□ -0.79
CASC4-202ENST00000345795 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
CASC4-202ENST00000345795 ZNF747Q9BV97 191 aa10.1□□□□□ -0.79
CASC4-202ENST00000345795 C2orf70A6NJV1 201 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 RPL39P62891 51 aaKnown RBP10.09□□□□□ -0.79
CASC4-202ENST00000345795 Q1RN00 199 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 OPRPNQ99935 248 aaPredicted RBP10.09□□□□□ -0.79
CASC4-202ENST00000345795 ZFHX3Q15911 3703 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 TRGV1A0A0A0MS02 117 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 ADARB2-AS1A8MUL3 147 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 RASL11AQ6T310 242 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 C16orf54Q6UWD8 224 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 STHQ8IWL8 128 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 TMEM61Q8N0U2 210 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 RAX2Q96IS3 184 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 COL6A5A8TX70 2615 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 LOC107984156A0A0G2JMH3 177 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 AMMECR1LQ6DCA0 310 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 ARL17AQ8IVW1 177 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 WFDC10AQ9H1F0 79 aa10.09□□□□□ -0.79
CASC4-202ENST00000345795 MRPL16Q9NX20 251 aaKnown RBP10.09□□□□□ -0.79
CASC4-202ENST00000345795 NBPF19A0A087WUL8 3843 aa10.08□□□□□ -0.8
CASC4-202ENST00000345795 EBI3Q14213 229 aa10.08□□□□□ -0.8
CASC4-202ENST00000345795 CYSLTR1Q9Y271 337 aa10.08□□□□□ -0.8
CASC4-202ENST00000345795 K7ERJ3 54 aa10.08□□□□□ -0.8
CASC4-202ENST00000345795 LAGE3Q14657 143 aa10.08□□□□□ -0.8
CASC4-202ENST00000345795 MRPS12O15235 138 aaKnown RBP10.08□□□□□ -0.8
CASC4-202ENST00000345795 A0A096LPF7 62 aa10.07□□□□□ -0.8
CASC4-202ENST00000345795 ST20Q9HBF5 79 aa10.07□□□□□ -0.8
CASC4-202ENST00000345795 ESM1Q9NQ30 184 aa10.07□□□□□ -0.8
CASC4-202ENST00000345795 TRGV2A0A075B6R0 118 aa10.07□□□□□ -0.8
CASC4-202ENST00000345795 IGHG4P01861 327 aa10.07□□□□□ -0.8
CASC4-202ENST00000345795 IGHV4-31P0DP07 118 aa10.07□□□□□ -0.8
CASC4-202ENST00000345795 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
CASC4-202ENST00000345795 PET117Q6UWS5 81 aa10.06□□□□□ -0.8
CASC4-202ENST00000345795 Q8N1Y9 231 aa10.06□□□□□ -0.8
CASC4-202ENST00000345795 OR11H12B2RN74 326 aa10.06□□□□□ -0.8
CASC4-202ENST00000345795 DEFB130BP0DP73 79 aa10.06□□□□□ -0.8
CASC4-202ENST00000345795 DEFB130AP0DP74 79 aa10.06□□□□□ -0.8
CASC4-202ENST00000345795 DSCR9P59020 149 aa10.06□□□□□ -0.8
CASC4-202ENST00000345795 SUMO2P61956 95 aaKnown RBP10.06□□□□□ -0.8
CASC4-202ENST00000345795 OR11H2Q8NH07 326 aa10.06□□□□□ -0.8
CASC4-202ENST00000345795 DLX4Q92988 240 aaPredicted RBP10.06□□□□□ -0.8
CASC4-202ENST00000345795 NXT2Q9NPJ8 142 aaKnown RBP10.06□□□□□ -0.8
CASC4-202ENST00000345795 PROK1P58294 105 aa10.06□□□□□ -0.8
CASC4-202ENST00000345795 ZNF48Q96MX3 618 aaPredicted RBP10.06□□□□□ -0.8
CASC4-202ENST00000345795 DPH3P1Q9H4G8 78 aa10.06□□□□□ -0.8
CASC4-202ENST00000345795 TP53TG1Q9Y2A0 90 aa10.06□□□□□ -0.8
CASC4-202ENST00000345795 J3QKU1 62 aa10.05□□□□□ -0.8
CASC4-202ENST00000345795 SCGB1C2P0DMR2 95 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms