RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ATP5L2Q7Z4Y8 100 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 UBE2E2Q96LR5 201 aa6.97□□□□□ -1.29
ATG4A-202ENST00000345734 TMEM189A5PLL7 270 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 SRIP30626 198 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 FOXA3P55318 350 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-202ENST00000345734 SYNJ2BPP57105 145 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 HBBP68871 147 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 SMAGPQ0VAQ4 97 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 DEFB136Q30KP8 78 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 C11orf44Q8N8P7 122 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 OR5A1Q8NGJ0 315 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 SMR3AQ99954 134 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 NDFIP1Q9BT67 221 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 TPPP3Q9BW30 176 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 NRN1Q9NPD7 142 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 UFC1Q9Y3C8 167 aa6.96□□□□□ -1.3
ATG4A-202ENST00000345734 WNK1Q9H4A3 2382 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 A0A1B0GW15 77 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 GAGE10A6NGK3 116 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 F5H697 171 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 ARMS2P0C7Q2 107 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 ZNF138P52744 262 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 HSD52Q0P140 79 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 Q0VG73 95 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 TMEM78Q5T7P6 136 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 C9orf47Q6ZRZ4 202 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 ZNF575Q86XF7 245 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 SAMD10Q9BYL1 202 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 HOXD3P31249 432 aaPredicted RBP6.95□□□□□ -1.3
ATG4A-202ENST00000345734 Q6ZQT7 251 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 HIVEP2P31629 2446 aa6.95□□□□□ -1.3
ATG4A-202ENST00000345734 F6UB75 175 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 SERF1AO75920 110 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 BAGE3Q86Y29 109 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 MRPL16Q9NX20 251 aaKnown RBP6.94□□□□□ -1.3
ATG4A-202ENST00000345734 AGRNO00468 2067 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 MUC21A0A0G2JKD1 596 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 MUC21A0A140T8X8 626 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 A0A1B0GUT8 65 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 ORM1P02763 201 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 MUC21Q5SSG8 566 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 LYZL1Q6UWQ5 148 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 DUX3Q96PT4 197 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 GTSF1LQ9H1H1 148 aa6.94□□□□□ -1.3
ATG4A-202ENST00000345734 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
ATG4A-202ENST00000345734 FABP5P3A8MUU1 101 aa6.93□□□□□ -1.3
ATG4A-202ENST00000345734 BVES-AS1Q5T3Y7 98 aa6.93□□□□□ -1.3
ATG4A-202ENST00000345734 PRR9Q5T870 116 aa6.93□□□□□ -1.3
ATG4A-202ENST00000345734 DCANP1Q8TF63 244 aa6.93□□□□□ -1.3
ATG4A-202ENST00000345734 RCHY1Q96PM5 261 aa6.93□□□□□ -1.3
ATG4A-202ENST00000345734 SPANXA1Q9NS26 97 aa6.93□□□□□ -1.3
ATG4A-202ENST00000345734 C11orf21Q9P2W6 132 aa6.93□□□□□ -1.3
ATG4A-202ENST00000345734 NIPBLQ6KC79 2804 aaeCLIP6.93□□□□□ -1.3
ATG4A-202ENST00000345734 SETXQ7Z333 2677 aaKnown RBP6.93□□□□□ -1.3
ATG4A-202ENST00000345734 C2orf70A6NJV1 201 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 K7EP34 96 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 LGALS9O00182 355 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 OVOL1O14753 267 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 GPX1P07203 203 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 HIST1H1AQ02539 215 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-202ENST00000345734 RIGQ13278 110 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 KLF5Q13887 457 aaPredicted RBP6.92□□□□□ -1.3
ATG4A-202ENST00000345734 MS4A6AQ9H2W1 248 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 IGKV3D-20A0A0C4DH25 116 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 KRTDAPP60985 99 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 SEC11AP67812 179 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 OR10J3Q5JRS4 329 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 ADAMTSL5Q6ZMM2 481 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 OR10J6PQ8NGY7 276 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 C18orf32Q8TCD1 76 aa6.92□□□□□ -1.3
ATG4A-202ENST00000345734 IGLC6P0CF74 106 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 FHL3Q13643 280 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 Q6AWC8 147 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 FOXI2Q6ZQN5 318 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 OR8A1Q8NGG7 326 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 C4orf3Q8WVX3 66 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 LINC00477Q96M19 166 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 ST20Q9HBF5 79 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 HIVEP1P15822 2718 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 LINC01619G3V211 115 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 GAGE5Q13069 117 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 GAGE6Q13070 117 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 FA2HQ7L5A8 372 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 ZFAND2AQ8N6M9 145 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 KLHL30-AS1Q8NEE0 82 aa6.91□□□□□ -1.3
ATG4A-202ENST00000345734 ZNF418Q8TF45 676 aaPredicted RBP6.91□□□□□ -1.3
ATG4A-202ENST00000345734 TRAV8-6A0A0B4J262 113 aa6.9□□□□□ -1.3
ATG4A-202ENST00000345734 LY6G6DO95868 133 aa6.9□□□□□ -1.3
ATG4A-202ENST00000345734 ZNF688P0C7X2 276 aa6.9□□□□□ -1.3
ATG4A-202ENST00000345734 ID1P41134 155 aa6.9□□□□□ -1.3
ATG4A-202ENST00000345734 GATD1Q8NB37 220 aa6.9□□□□□ -1.3
ATG4A-202ENST00000345734 BORCS7Q96B45 105 aa6.9□□□□□ -1.3
ATG4A-202ENST00000345734 NSD1Q96L73 2696 aaPredicted RBP6.9□□□□□ -1.31
ATG4A-202ENST00000345734 CD28P10747 220 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 MPV17L2Q567V2 206 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 PSMG4Q5JS54 123 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 KCNS1Q96KK3 526 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 FAM19A4Q96LR4 140 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 AP1S3Q96PC3 154 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms