RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 RHOHQ15669 191 aa13.68□□□□□ -0.22
CEACAM3-201ENST00000344550 ZFP2Q6ZN57 461 aa13.68□□□□□ -0.22
CEACAM3-201ENST00000344550 IL36BQ9NZH7 164 aa13.68□□□□□ -0.22
CEACAM3-201ENST00000344550 IGKV3D-20A0A0C4DH25 116 aa13.67□□□□□ -0.22
CEACAM3-201ENST00000344550 A8MWV9 139 aa13.67□□□□□ -0.22
CEACAM3-201ENST00000344550 BCL2L11O43521 198 aa13.67□□□□□ -0.22
CEACAM3-201ENST00000344550 S100A9P06702 114 aaKnown RBP13.67□□□□□ -0.22
CEACAM3-201ENST00000344550 DNAH10OSP0CZ25 163 aa13.67□□□□□ -0.22
CEACAM3-201ENST00000344550 EVI2AP22794 236 aa13.67□□□□□ -0.22
CEACAM3-201ENST00000344550 S100A4P26447 101 aaKnown RBP13.67□□□□□ -0.22
CEACAM3-201ENST00000344550 LGALSLQ3ZCW2 172 aaPredicted RBP13.67□□□□□ -0.22
CEACAM3-201ENST00000344550 C10orf126Q8N4M7 172 aa13.67□□□□□ -0.22
CEACAM3-201ENST00000344550 C16orf90A8MZG2 172 aa13.66□□□□□ -0.22
CEACAM3-201ENST00000344550 SMLR1H3BR10 107 aa13.66□□□□□ -0.22
CEACAM3-201ENST00000344550 ASIPP42127 132 aa13.66□□□□□ -0.22
CEACAM3-201ENST00000344550 UBE2G1P62253 170 aa13.66□□□□□ -0.22
CEACAM3-201ENST00000344550 ZNF506Q5JVG8 444 aa13.66□□□□□ -0.22
CEACAM3-201ENST00000344550 FAM162BQ5T6X4 162 aa13.66□□□□□ -0.22
CEACAM3-201ENST00000344550 ZNF575Q86XF7 245 aa13.66□□□□□ -0.22
CEACAM3-201ENST00000344550 SLC25A29Q8N8R3 303 aa13.66□□□□□ -0.22
CEACAM3-201ENST00000344550 OR11H4Q8NGC9 324 aa13.66□□□□□ -0.22
CEACAM3-201ENST00000344550 PGPEP1LA6NFU8 196 aa13.65□□□□□ -0.22
CEACAM3-201ENST00000344550 CST9LP1Q5W188 147 aa13.65□□□□□ -0.22
CEACAM3-201ENST00000344550 Q6ZRN7 208 aaPredicted RBP13.65□□□□□ -0.22
CEACAM3-201ENST00000344550 ZNF471Q9BX82 626 aaPredicted RBP13.65□□□□□ -0.22
CEACAM3-201ENST00000344550 DYNC1H1Q14204 4646 aaKnown RBP13.64□□□□□ -0.23
CEACAM3-201ENST00000344550 B4DEV8 164 aa13.64□□□□□ -0.23
CEACAM3-201ENST00000344550 CDK2AP2O75956 126 aa13.64□□□□□ -0.23
CEACAM3-201ENST00000344550 LTAP01374 205 aa13.64□□□□□ -0.23
CEACAM3-201ENST00000344550 NHLRC2Q8NBF2 726 aa13.64□□□□□ -0.23
CEACAM3-201ENST00000344550 SFT2D1Q8WV19 159 aa13.64□□□□□ -0.23
CEACAM3-201ENST00000344550 ZNF674Q2M3X9 581 aa13.63□□□□□ -0.23
CEACAM3-201ENST00000344550 ZC2HC1AQ96GY0 325 aa13.63□□□□□ -0.23
CEACAM3-201ENST00000344550 KRBOX1C9JBD0 128 aa13.62□□□□□ -0.23
CEACAM3-201ENST00000344550 EREGO14944 169 aa13.62□□□□□ -0.23
CEACAM3-201ENST00000344550 TPT1P13693 172 aaKnown RBP13.62□□□□□ -0.23
CEACAM3-201ENST00000344550 CRIP1P50238 77 aa13.62□□□□□ -0.23
CEACAM3-201ENST00000344550 EIF5AL1Q6IS14 154 aaKnown RBP13.62□□□□□ -0.23
CEACAM3-201ENST00000344550 SYT8Q8NBV8 401 aa13.62□□□□□ -0.23
CEACAM3-201ENST00000344550 FAM213BQ8TBF2 198 aa13.62□□□□□ -0.23
CEACAM3-201ENST00000344550 TRAV8-6A0A0B4J262 113 aa13.61□□□□□ -0.23
CEACAM3-201ENST00000344550 RHODO00212 210 aa13.61□□□□□ -0.23
CEACAM3-201ENST00000344550 PAGE4O60829 102 aa13.61□□□□□ -0.23
CEACAM3-201ENST00000344550 AKR1C3P42330 323 aa13.61□□□□□ -0.23
CEACAM3-201ENST00000344550 RAB5CP51148 216 aa13.61□□□□□ -0.23
CEACAM3-201ENST00000344550 LINC01559Q495D7 138 aa13.61□□□□□ -0.23
CEACAM3-201ENST00000344550 SPATA12Q7Z6I5 190 aa13.61□□□□□ -0.23
CEACAM3-201ENST00000344550 WFDC10BQ8IUB3 73 aa13.61□□□□□ -0.23
CEACAM3-201ENST00000344550 PARLQ9H300 379 aa13.61□□□□□ -0.23
CEACAM3-201ENST00000344550 MSRB1Q9NZV6 116 aa13.61□□□□□ -0.23
CEACAM3-201ENST00000344550 IGHV3-38A0A0C4DH36 116 aa13.6□□□□□ -0.23
CEACAM3-201ENST00000344550 LOC100131303A0A0U1RQF7 123 aa13.6□□□□□ -0.23
CEACAM3-201ENST00000344550 SH2D1AO60880 128 aa13.6□□□□□ -0.23
CEACAM3-201ENST00000344550 PFDN1O60925 122 aa13.6□□□□□ -0.23
CEACAM3-201ENST00000344550 H2AFB1P0C5Y9 115 aa13.6□□□□□ -0.23
CEACAM3-201ENST00000344550 LINC01556Q5JQF7 62 aa13.6□□□□□ -0.23
CEACAM3-201ENST00000344550 TMUB2Q71RG4 321 aa13.6□□□□□ -0.23
CEACAM3-201ENST00000344550 PGPEP1Q9NXJ5 209 aa13.6□□□□□ -0.23
CEACAM3-201ENST00000344550 ERVFC1-1P60608 527 aa13.59□□□□□ -0.23
CEACAM3-201ENST00000344550 GTSF1LQ9H1H1 148 aa13.59□□□□□ -0.23
CEACAM3-201ENST00000344550 SCRT2Q9NQ03 307 aa13.59□□□□□ -0.23
CEACAM3-201ENST00000344550 TRAV1-1A0A0B4J248 108 aa13.58□□□□□ -0.24
CEACAM3-201ENST00000344550 CRYGDP07320 174 aa13.58□□□□□ -0.24
CEACAM3-201ENST00000344550 ARMS2P0C7Q2 107 aa13.58□□□□□ -0.24
CEACAM3-201ENST00000344550 LELP1Q5T871 98 aa13.58□□□□□ -0.24
CEACAM3-201ENST00000344550 CDPF1Q6NVV7 123 aa13.58□□□□□ -0.24
CEACAM3-201ENST00000344550 ATP6V0E2Q8NHE4 81 aa13.58□□□□□ -0.24
CEACAM3-201ENST00000344550 TEX46H3BTG2 121 aa13.57□□□□□ -0.24
CEACAM3-201ENST00000344550 CXCL1P09341 107 aa13.57□□□□□ -0.24
CEACAM3-201ENST00000344550 UFSP1Q6NVU6 142 aa13.57□□□□□ -0.24
CEACAM3-201ENST00000344550 PHLDA3Q9Y5J5 127 aa13.57□□□□□ -0.24
CEACAM3-201ENST00000344550 IGHV3-73A0A0B4J1V6 119 aa13.56□□□□□ -0.24
CEACAM3-201ENST00000344550 H3BVH4 76 aa13.56□□□□□ -0.24
CEACAM3-201ENST00000344550 DMRTA1Q5VZB9 504 aa13.56□□□□□ -0.24
CEACAM3-201ENST00000344550 TCTE3Q8IZS6 198 aa13.56□□□□□ -0.24
CEACAM3-201ENST00000344550 MLST8Q9BVC4 326 aa13.56□□□□□ -0.24
CEACAM3-201ENST00000344550 MANBALQ9NQG1 85 aa13.56□□□□□ -0.24
CEACAM3-201ENST00000344550 A0A087WWC5 75 aa13.55□□□□□ -0.24
CEACAM3-201ENST00000344550 M0R036 132 aa13.55□□□□□ -0.24
CEACAM3-201ENST00000344550 ZFP82Q8N141 532 aa13.55□□□□□ -0.24
CEACAM3-201ENST00000344550 LINC00694P0DN24 101 aa13.54□□□□□ -0.24
CEACAM3-201ENST00000344550 OR10J3Q5JRS4 329 aa13.54□□□□□ -0.24
CEACAM3-201ENST00000344550 BAGE2Q86Y30 109 aa13.54□□□□□ -0.24
CEACAM3-201ENST00000344550 SFRP2Q96HF1 295 aa13.54□□□□□ -0.24
CEACAM3-201ENST00000344550 IBA57-AS1B1ANH7 110 aa13.53□□□□□ -0.24
CEACAM3-201ENST00000344550 KRTAP10-2P60368 255 aa13.53□□□□□ -0.24
CEACAM3-201ENST00000344550 LAGE3Q14657 143 aa13.53□□□□□ -0.24
CEACAM3-201ENST00000344550 Q6ZSN1 163 aa13.53□□□□□ -0.24
CEACAM3-201ENST00000344550 SCO2A0A1W2PP80 73 aa13.52□□□□□ -0.25
CEACAM3-201ENST00000344550 C11orf52Q96A22 123 aa13.52□□□□□ -0.25
CEACAM3-201ENST00000344550 A0A087WTM6 91 aa13.51□□□□□ -0.25
CEACAM3-201ENST00000344550 TRBV10-1A0A0K0K1A3 114 aa13.51□□□□□ -0.25
CEACAM3-201ENST00000344550 GRIFINA4D1Z8 144 aa13.51□□□□□ -0.25
CEACAM3-201ENST00000344550 SAMD10Q9BYL1 202 aa13.51□□□□□ -0.25
CEACAM3-201ENST00000344550 TNFRSF18Q9Y5U5 241 aa13.51□□□□□ -0.25
CEACAM3-201ENST00000344550 SULT1A2P50226 295 aa13.5□□□□□ -0.25
CEACAM3-201ENST00000344550 SMIM12Q96EX1 92 aa13.5□□□□□ -0.25
CEACAM3-201ENST00000344550 LRP1BQ9NZR2 4599 aa13.49□□□□□ -0.25
CEACAM3-201ENST00000344550 A0A1B0GV50 99 aa13.49□□□□□ -0.25
CEACAM3-201ENST00000344550 SLC51BQ86UW2 128 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms