RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 WT1P19544 449 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-201ENST00000343524 IGHV1-2P23083 117 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 ADIPOQQ15848 244 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 TMEM155Q4W5P6 130 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 UTF1Q5T230 341 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 Q6ZT83 130 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 Q71RC1 249 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-201ENST00000343524 C3orf22Q8N5N4 141 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 LINC00311Q8N616 119 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 SLC50A1Q9BRV3 221 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 UBTD1Q9HAC8 227 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 CENPEQ02224 2701 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 NPFFO15130 113 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 MRPS12O15235 138 aaKnown RBP6.29□□□□□ -1.4
ATG4A-201ENST00000343524 RPL7P18124 248 aaKnown RBP6.29□□□□□ -1.4
ATG4A-201ENST00000343524 HCP5Q6MZN7 132 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 Q6ZQT7 251 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 SLC25A29Q8N8R3 303 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 NRACQ8N912 160 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 RNF125Q96EQ8 232 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 ASCL2Q99929 193 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 RNF7Q9UBF6 113 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 IGHV1-69DA0A0B4J2H0 117 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 PPP1R17O96001 155 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 Q0VFX4 171 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 BAALCQ8WXS3 180 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 PLEKHB2Q96CS7 222 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 LINC00526Q96FQ7 95 aa6.29□□□□□ -1.4
ATG4A-201ENST00000343524 BOD1L1Q8NFC6 3051 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 CELSR2Q9HCU4 2923 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 LINC01548A6NM66 108 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 B9A039 149 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 M0R3E3 92 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 LYZL6O75951 148 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 CECR9P0C854 216 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 EFNA4P52798 201 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 EMP1P54849 157 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 ERCC8Q13216 396 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 SPINK14Q6IE38 97 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 GAFA1Q96PS6 74 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 AGRNO00468 2067 aa6.28□□□□□ -1.4
ATG4A-201ENST00000343524 IGHV4-4A0A075B6R2 117 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 RBAKDNA6NC62 111 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 TGFAP01135 160 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 IGLV1-44P01699 117 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 IGHV3-33P01772 117 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 COX6CP09669 75 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 Q1RN00 199 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 ZNF672Q499Z4 452 aaPredicted RBP6.27□□□□□ -1.41
ATG4A-201ENST00000343524 DEFB121Q5J5C9 76 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 FAM201AQ5SY85 155 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 CHCHD5Q9BSY4 110 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 HIVEP1P15822 2718 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 C11orf86A6NJI1 115 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 I3L2K1 104 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 TNFAIP6P98066 277 aaPredicted RBP6.27□□□□□ -1.41
ATG4A-201ENST00000343524 ZNF56Q15929 161 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 C2orf82Q6UX34 121 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 C17orf77Q96MU5 243 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 PDZD2O15018 2839 aa6.27□□□□□ -1.41
ATG4A-201ENST00000343524 IGKV2-40A0A087WW87 121 aaPredicted RBP6.26□□□□□ -1.41
ATG4A-201ENST00000343524 FAM236AA0A1B0GUQ0 79 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 FAM236BA0A1B0GV22 79 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 M0R381 172 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 IGKV1-17P01599 117 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 IGKV2D-40P01614 121 aaPredicted RBP6.26□□□□□ -1.41
ATG4A-201ENST00000343524 CD3EP07766 207 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 LGALS3P17931 250 aaKnown RBP6.26□□□□□ -1.41
ATG4A-201ENST00000343524 GLRXP35754 106 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 EBI3Q14213 229 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 ZNF491Q8N8L2 437 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 TMEM263Q8WUH6 116 aaKnown RBP6.26□□□□□ -1.41
ATG4A-201ENST00000343524 MSRB1Q9NZV6 116 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 FREM1Q5H8C1 2179 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 BSNQ9UPA5 3926 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 DSCAML1Q8TD84 2053 aa6.26□□□□□ -1.41
ATG4A-201ENST00000343524 MED13Q9UHV7 2174 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 LY6G6EA0A0G2JKS1 128 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 TEX49A0A1B0GTD5 131 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 CXCL5P42830 114 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 SUMO2P61956 95 aaKnown RBP6.25□□□□□ -1.41
ATG4A-201ENST00000343524 HERVK_113P63121 156 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 PMVKQ15126 192 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 C2orf66Q6UXQ4 117 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 FAM19A5Q7Z5A7 132 aaPredicted RBP6.25□□□□□ -1.41
ATG4A-201ENST00000343524 TRPT1Q86TN4 253 aaKnown RBP6.25□□□□□ -1.41
ATG4A-201ENST00000343524 MRAPQ8TCY5 172 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 ZNF256Q9Y2P7 627 aaPredicted RBP6.25□□□□□ -1.41
ATG4A-201ENST00000343524 U3KQA8 63 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 NAV3Q8IVL0 2385 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 NBASA2RRP1 2371 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 GAS8-AS1O95177 125 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 GATA1P15976 413 aaPredicted RBP6.25□□□□□ -1.41
ATG4A-201ENST00000343524 ZNF80P51504 273 aaPredicted RBP6.25□□□□□ -1.41
ATG4A-201ENST00000343524 TEX36Q5VZQ5 186 aa6.25□□□□□ -1.41
ATG4A-201ENST00000343524 RUSC1-AS1Q66K80 236 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms