RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 KIR3DS1Q14943 382 aa13.95□□□□□ -0.18
HOXA9-201ENST00000343483 PMCHL2Q9BQD1 86 aa13.95□□□□□ -0.18
HOXA9-201ENST00000343483 TCF21O43680 179 aa13.94□□□□□ -0.18
HOXA9-201ENST00000343483 OR1N2Q8NGR9 330 aa13.94□□□□□ -0.18
HOXA9-201ENST00000343483 MRPS16Q9Y3D3 137 aaKnown RBP13.94□□□□□ -0.18
HOXA9-201ENST00000343483 K7EQG2 157 aa13.94□□□□□ -0.18
HOXA9-201ENST00000343483 WFDC12Q8WWY7 111 aa13.94□□□□□ -0.18
HOXA9-201ENST00000343483 MAP1LC3AQ9H492 121 aa13.94□□□□□ -0.18
HOXA9-201ENST00000343483 HBDP02042 147 aa13.93□□□□□ -0.18
HOXA9-201ENST00000343483 FXYD7P58549 80 aa13.93□□□□□ -0.18
HOXA9-201ENST00000343483 COL5A1-AS1Q5SY13 56 aa13.93□□□□□ -0.18
HOXA9-201ENST00000343483 ADAMTSL5Q6ZMM2 481 aa13.93□□□□□ -0.18
HOXA9-201ENST00000343483 TRBV7-9A0A0J9YWB2 115 aa13.92□□□□□ -0.18
HOXA9-201ENST00000343483 H3BVH4 76 aa13.92□□□□□ -0.18
HOXA9-201ENST00000343483 GAS8-AS1O95177 125 aa13.92□□□□□ -0.18
HOXA9-201ENST00000343483 C11orf44Q8N8P7 122 aa13.92□□□□□ -0.18
HOXA9-201ENST00000343483 INAFM1C9JVW0 142 aa13.92□□□□□ -0.18
HOXA9-201ENST00000343483 SMIM15Q7Z3B0 74 aa13.91□□□□□ -0.18
HOXA9-201ENST00000343483 APRG1Q8IVJ8 170 aa13.91□□□□□ -0.18
HOXA9-201ENST00000343483 TNFRSF6BO95407 300 aa13.91□□□□□ -0.18
HOXA9-201ENST00000343483 EVI2AP22794 236 aa13.91□□□□□ -0.18
HOXA9-201ENST00000343483 G0S2P27469 103 aa13.91□□□□□ -0.18
HOXA9-201ENST00000343483 SCGB2A2Q13296 93 aa13.91□□□□□ -0.18
HOXA9-201ENST00000343483 ANXA2RQ3ZCQ2 193 aa13.91□□□□□ -0.18
HOXA9-201ENST00000343483 SPANXN1Q5VSR9 72 aa13.91□□□□□ -0.18
HOXA9-201ENST00000343483 OR9G4Q8NGQ1 327 aa13.91□□□□□ -0.18
HOXA9-201ENST00000343483 PEMTQ9UBM1 199 aa13.91□□□□□ -0.18
HOXA9-201ENST00000343483 IGKV3-20P01619 116 aa13.9□□□□□ -0.18
HOXA9-201ENST00000343483 DLX4Q92988 240 aaPredicted RBP13.9□□□□□ -0.18
HOXA9-201ENST00000343483 A0A0J9YX75 114 aa13.89□□□□□ -0.19
HOXA9-201ENST00000343483 A0A1W2PRX2 142 aa13.89□□□□□ -0.19
HOXA9-201ENST00000343483 SNAI2O43623 268 aa13.89□□□□□ -0.19
HOXA9-201ENST00000343483 S100A4P26447 101 aaKnown RBP13.89□□□□□ -0.19
HOXA9-201ENST00000343483 CACNG7P62955 275 aa13.89□□□□□ -0.19
HOXA9-201ENST00000343483 STPG4Q8N801 248 aa13.89□□□□□ -0.19
HOXA9-201ENST00000343483 TP73-AS1Q9UF72 201 aa13.89□□□□□ -0.19
HOXA9-201ENST00000343483 KLLNB2CW77 178 aa13.89□□□□□ -0.19
HOXA9-201ENST00000343483 RNASE1P07998 156 aaKnown RBP13.89□□□□□ -0.19
HOXA9-201ENST00000343483 GATA1P15976 413 aaPredicted RBP13.89□□□□□ -0.19
HOXA9-201ENST00000343483 ZNF25P17030 456 aaPredicted RBP13.89□□□□□ -0.19
HOXA9-201ENST00000343483 ASIPP42127 132 aa13.89□□□□□ -0.19
HOXA9-201ENST00000343483 HINT1P49773 126 aaPredicted RBP13.89□□□□□ -0.19
HOXA9-201ENST00000343483 IGHV4-4A0A075B6R2 117 aa13.88□□□□□ -0.19
HOXA9-201ENST00000343483 NXT2Q9NPJ8 142 aaKnown RBP13.88□□□□□ -0.19
HOXA9-201ENST00000343483 SCRT2Q9NQ03 307 aa13.88□□□□□ -0.19
HOXA9-201ENST00000343483 SLC25A34Q6PIV7 304 aa13.87□□□□□ -0.19
HOXA9-201ENST00000343483 LINC01546A6NGU7 62 aa13.87□□□□□ -0.19
HOXA9-201ENST00000343483 CD28P10747 220 aa13.87□□□□□ -0.19
HOXA9-201ENST00000343483 ZNF418Q8TF45 676 aaPredicted RBP13.87□□□□□ -0.19
HOXA9-201ENST00000343483 GOLT1BQ9Y3E0 138 aa13.87□□□□□ -0.19
HOXA9-201ENST00000343483 GNRH2O43555 120 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 SPRY2O43597 315 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 OR2K2Q8NGT1 345 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 IFI27L1Q96BM0 104 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 JMJD1CQ15652 2540 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 TRAV12-3A0A0B4J271 114 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 M0R381 172 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 LEPP41159 167 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 LGALS9BQ3B8N2 356 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 LGALS9CQ6DKI2 356 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 LINC01006Q8NI28 216 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 DYNLRB2Q8TF09 96 aa13.86□□□□□ -0.19
HOXA9-201ENST00000343483 RAX2Q96IS3 184 aa13.85□□□□□ -0.19
HOXA9-201ENST00000343483 TRAV12-2A0A075B6T6 113 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 TRAV26-2A0A0B4J265 109 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 FAM159AQ6UWV7 190 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 TMEM61Q8N0U2 210 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 ODF3Q96PU9 254 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 PHLDA3Q9Y5J5 127 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 C7orf71A4D174 169 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 FCER1GP30273 86 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 FOXI2Q6ZQN5 318 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 Q8N8P6 123 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 TMEM208Q9BTX3 173 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 TMEM160Q9NX00 188 aa13.84□□□□□ -0.19
HOXA9-201ENST00000343483 HILS1P60008 231 aa13.83□□□□□ -0.2
HOXA9-201ENST00000343483 CITED2Q99967 270 aaPredicted RBP13.83□□□□□ -0.2
HOXA9-201ENST00000343483 C2CD3Q4AC94 2353 aa13.83□□□□□ -0.2
HOXA9-201ENST00000343483 DUSP14O95147 198 aaKnown RBP13.83□□□□□ -0.2
HOXA9-201ENST00000343483 SPINK13Q1W4C9 94 aa13.83□□□□□ -0.2
HOXA9-201ENST00000343483 NRACQ8N912 160 aa13.83□□□□□ -0.2
HOXA9-201ENST00000343483 C18orf15Q96N68 181 aa13.83□□□□□ -0.2
HOXA9-201ENST00000343483 C16orf95Q9H693 158 aa13.83□□□□□ -0.2
HOXA9-201ENST00000343483 RNASE3P12724 160 aaKnown RBP13.82□□□□□ -0.2
HOXA9-201ENST00000343483 DEFB131AP59861 70 aa13.82□□□□□ -0.2
HOXA9-201ENST00000343483 IGLV2-18A0A075B6J9 118 aa13.81□□□□□ -0.2
HOXA9-201ENST00000343483 CCL24O00175 119 aa13.81□□□□□ -0.2
HOXA9-201ENST00000343483 CDKN1BP46527 198 aa13.81□□□□□ -0.2
HOXA9-201ENST00000343483 KNCNA6PVL3 124 aa13.81□□□□□ -0.2
HOXA9-201ENST00000343483 DLEU1O43261 78 aa13.81□□□□□ -0.2
HOXA9-201ENST00000343483 MED14OSP0DP75 135 aa13.81□□□□□ -0.2
HOXA9-201ENST00000343483 COX8AP10176 69 aa13.81□□□□□ -0.2
HOXA9-201ENST00000343483 CD7P09564 240 aa13.8□□□□□ -0.2
HOXA9-201ENST00000343483 DEFB114Q30KQ6 69 aa13.8□□□□□ -0.2
HOXA9-201ENST00000343483 TMEM158Q8WZ71 300 aa13.8□□□□□ -0.2
HOXA9-201ENST00000343483 MRAP2Q96G30 205 aa13.8□□□□□ -0.2
HOXA9-201ENST00000343483 TSSC4Q9Y5U2 329 aaPredicted RBP13.8□□□□□ -0.2
HOXA9-201ENST00000343483 PRSS47A8MTI9 375 aa13.79□□□□□ -0.2
HOXA9-201ENST00000343483 FHL3Q13643 280 aa13.79□□□□□ -0.2
HOXA9-201ENST00000343483 CD300EQ496F6 205 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms