RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 H3BUA1 57 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 IGHV4-38-2P0DP08 117 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 AMTNQ6UX39 209 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 K7ERJ3 54 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 ZNF493Q6ZR52 646 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 AJUBAQ96IF1 538 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 EPG5Q9HCE0 2579 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 TRBV6-1A0A0K0K1D8 114 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 ELANEP08246 267 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 DEFB112Q30KQ8 113 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 A0A1W2PPM0 123 aa5.56□□□□□ -1.52
VCAN-202ENST00000342785 ZNF625Q96I27 306 aaPredicted RBP5.56□□□□□ -1.52
VCAN-202ENST00000342785 ZNF48Q96MX3 618 aaPredicted RBP5.56□□□□□ -1.52
VCAN-202ENST00000342785 SIRPDQ9H106 197 aa5.56□□□□□ -1.52
VCAN-202ENST00000342785 NACAE9PAV3 2078 aa5.56□□□□□ -1.52
VCAN-202ENST00000342785 CTRLP40313 264 aa5.56□□□□□ -1.52
VCAN-202ENST00000342785 DEFB1P60022 68 aa5.56□□□□□ -1.52
VCAN-202ENST00000342785 IGHV3-16A0A0C4DH30 117 aa5.56□□□□□ -1.52
VCAN-202ENST00000342785 I3L3M4 83 aa5.56□□□□□ -1.52
VCAN-202ENST00000342785 NSUN5P1Q3KNT7 163 aa5.56□□□□□ -1.52
VCAN-202ENST00000342785 IGHV4-30-2A0A087WSY4 118 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 LOXL1Q08397 574 aaPredicted RBP5.55□□□□□ -1.52
VCAN-202ENST00000342785 Q5PR19 223 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 PRIMA1Q86XR5 153 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 ZNF80P51504 273 aaPredicted RBP5.55□□□□□ -1.52
VCAN-202ENST00000342785 CMC4P56277 68 aaPredicted RBP5.55□□□□□ -1.52
VCAN-202ENST00000342785 TAL2Q16559 108 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 C16orf54Q6UWD8 224 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 C5orf56Q8N8D9 126 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 RASL10AQ92737 203 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 ATP6V0BQ99437 205 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 SCGB1A1P11684 91 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 RPL35AP18077 110 aaKnown RBP5.55□□□□□ -1.52
VCAN-202ENST00000342785 MYCNOSP40205 109 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 LINC00158P58513 81 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 RPL39LQ96EH5 51 aaKnown RBP5.55□□□□□ -1.52
VCAN-202ENST00000342785 SCRT2Q9NQ03 307 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 FASNP49327 2511 aaKnown RBP5.55□□□□□ -1.52
VCAN-202ENST00000342785 C9JAW5 83 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 H3BMG7 143 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 J3QQQ9 107 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 TSPAN13O95857 204 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 CRYGBP07316 175 aa5.55□□□□□ -1.52
VCAN-202ENST00000342785 LINC01548A6NM66 108 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 LMO4P61968 165 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 CFAP161Q6P656 301 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 LINC01619G3V211 115 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 ATXN8Q156A1 80 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 C12orf74Q32Q52 190 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 SPATA12Q7Z6I5 190 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 C10orf105Q8TEF2 133 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 DSCAML1Q8TD84 2053 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 ARHGAP32A7KAX9 2087 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 ODF3BA8MYP8 253 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 CEND1Q8N111 149 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 PTPRSQ13332 1948 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 HOXD3P31249 432 aaPredicted RBP5.54□□□□□ -1.52
VCAN-202ENST00000342785 BOD1L2Q8IYS8 172 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 C10orf126Q8N4M7 172 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 C1QTNF4Q9BXJ3 329 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 IGHV3-38A0A0C4DH36 116 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 J3QLI3 93 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 K7EMI3 77 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 C2orf82Q6UX34 121 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 NDUFA12Q9UI09 145 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 UNQ9165/PRO28630Q6UXU0 137 aa5.54□□□□□ -1.52
VCAN-202ENST00000342785 GAGE12JA6NER3 117 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 TAX1BP3O14907 124 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 DEFB130BP0DP73 79 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 DEFB130AP0DP74 79 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 GAGE4Q13068 117 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 GAGE5Q13069 117 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 C9orf47Q6ZRZ4 202 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 RNASE8Q8TDE3 154 aaKnown RBP5.53□□□□□ -1.52
VCAN-202ENST00000342785 GAGE2BQ13066 116 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 GAGE2EQ4V326 116 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 ZNRF2Q8NHG8 242 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 GAGE2DQ9UEU5 116 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 CHD7Q9P2D1 2997 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 RBMY1BA6NDE4 496 aaKnown RBP5.53□□□□□ -1.52
VCAN-202ENST00000342785 RBMY1EA6NEQ0 496 aaKnown RBP5.53□□□□□ -1.52
VCAN-202ENST00000342785 RBMY1DP0C7P1 496 aaKnown RBP5.53□□□□□ -1.52
VCAN-202ENST00000342785 RBMY1A1P0DJD3 496 aaKnown RBP5.53□□□□□ -1.52
VCAN-202ENST00000342785 RBMY1CP0DJD4 496 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 RNF114Q9Y508 228 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 RANBP2P49792 3224 aaKnown RBP5.53□□□□□ -1.52
VCAN-202ENST00000342785 TRBV20-1A0A075B6N2 111 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 PAX4O43316 350 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 FXYD2P54710 66 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 CCDC140Q96MF4 163 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 PRO1854Q9UHT4 67 aa5.53□□□□□ -1.52
VCAN-202ENST00000342785 IGHG2P01859 326 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 VPREB3Q9UKI3 123 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 ZNF462Q96JM2 2506 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 F8W1H4 67 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 FSTL3O95633 263 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 TMEM86BQ8N661 226 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 TP73-AS1Q9UF72 201 aa5.52□□□□□ -1.53
VCAN-202ENST00000342785 TSSC4Q9Y5U2 329 aaPredicted RBP5.52□□□□□ -1.53
VCAN-202ENST00000342785 LY6LH3BQJ8 138 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms