RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 ZNF883P0CG24 379 aa14.12□□□□□ -0.15
SMPD1-201ENST00000342245 EMP1P54849 157 aa14.12□□□□□ -0.15
SMPD1-201ENST00000342245 FAM186AA6NE01 2351 aa14.12□□□□□ -0.15
SMPD1-201ENST00000342245 MRPL53Q96EL3 112 aaKnown RBP14.12□□□□□ -0.15
SMPD1-201ENST00000342245 LOXP28300 417 aaPredicted RBP14.11□□□□□ -0.15
SMPD1-201ENST00000342245 TSPEAR-AS2P59090 65 aa14.11□□□□□ -0.15
SMPD1-201ENST00000342245 HERVK_113P63121 156 aa14.11□□□□□ -0.15
SMPD1-201ENST00000342245 FAM19A5Q7Z5A7 132 aaPredicted RBP14.11□□□□□ -0.15
SMPD1-201ENST00000342245 TIMM17AQ99595 171 aa14.11□□□□□ -0.15
SMPD1-201ENST00000342245 FRYQ5TBA9 3013 aa14.11□□□□□ -0.15
SMPD1-201ENST00000342245 A0A0J9YX75 114 aa14.1□□□□□ -0.15
SMPD1-201ENST00000342245 FAM236AA0A1B0GUQ0 79 aa14.1□□□□□ -0.15
SMPD1-201ENST00000342245 FAM236BA0A1B0GV22 79 aa14.1□□□□□ -0.15
SMPD1-201ENST00000342245 H7C2G1 150 aa14.1□□□□□ -0.15
SMPD1-201ENST00000342245 LEPROTO15243 131 aa14.1□□□□□ -0.15
SMPD1-201ENST00000342245 EIF4EBP3O60516 100 aaPredicted RBP14.1□□□□□ -0.15
SMPD1-201ENST00000342245 IGLV1-47P01700 117 aa14.1□□□□□ -0.15
SMPD1-201ENST00000342245 DLX1P56177 255 aa14.1□□□□□ -0.15
SMPD1-201ENST00000342245 H7C423 109 aa14.1□□□□□ -0.15
SMPD1-201ENST00000342245 PF4V1P10720 104 aa14.1□□□□□ -0.15
SMPD1-201ENST00000342245 IGFL4Q6B9Z1 124 aa14.1□□□□□ -0.15
SMPD1-201ENST00000342245 IGLV11-55A0A075B6I3 123 aa14.09□□□□□ -0.15
SMPD1-201ENST00000342245 BUB1B-PAK6H3BSN5 160 aa14.09□□□□□ -0.15
SMPD1-201ENST00000342245 IGIPA6NJ69 53 aa14.09□□□□□ -0.15
SMPD1-201ENST00000342245 TMEM219Q86XT9 240 aa14.09□□□□□ -0.15
SMPD1-201ENST00000342245 MUSTN1Q8IVN3 82 aa14.09□□□□□ -0.15
SMPD1-201ENST00000342245 LOC107984640A0A0U1RRK4 108 aa14.08□□□□□ -0.15
SMPD1-201ENST00000342245 SDHAF1A6NFY7 115 aa14.08□□□□□ -0.15
SMPD1-201ENST00000342245 PRAC2D3DTV9 90 aa14.08□□□□□ -0.15
SMPD1-201ENST00000342245 CDX4O14627 284 aaPredicted RBP14.08□□□□□ -0.15
SMPD1-201ENST00000342245 AGPAT4-IT1Q9H0P7 198 aa14.08□□□□□ -0.15
SMPD1-201ENST00000342245 KAAG1Q9UBP8 84 aa14.08□□□□□ -0.15
SMPD1-201ENST00000342245 TRGV11A0A075B6L2 103 aa14.08□□□□□ -0.16
SMPD1-201ENST00000342245 TMEM178BH3BS89 294 aa14.08□□□□□ -0.16
SMPD1-201ENST00000342245 TRIAP1O43715 76 aa14.08□□□□□ -0.16
SMPD1-201ENST00000342245 ELANEP08246 267 aa14.08□□□□□ -0.16
SMPD1-201ENST00000342245 NCOR1O75376 2440 aa14.08□□□□□ -0.16
SMPD1-201ENST00000342245 RNF223E7ERA6 249 aa14.07□□□□□ -0.16
SMPD1-201ENST00000342245 ZNF876PQ49A33 203 aa14.07□□□□□ -0.16
SMPD1-201ENST00000342245 METTL26Q96S19 204 aa14.07□□□□□ -0.16
SMPD1-201ENST00000342245 OOSP1A8MZH6 123 aa14.07□□□□□ -0.16
SMPD1-201ENST00000342245 F8W735 103 aaPredicted RBP14.07□□□□□ -0.16
SMPD1-201ENST00000342245 TSHBP01222 138 aa14.07□□□□□ -0.16
SMPD1-201ENST00000342245 CCL8P80075 99 aa14.07□□□□□ -0.16
SMPD1-201ENST00000342245 UBTD1Q9HAC8 227 aa14.07□□□□□ -0.16
SMPD1-201ENST00000342245 C17orf100A8MU93 164 aa14.06□□□□□ -0.16
SMPD1-201ENST00000342245 NUP37Q8NFH4 326 aa14.06□□□□□ -0.16
SMPD1-201ENST00000342245 RPL39LQ96EH5 51 aaKnown RBP14.06□□□□□ -0.16
SMPD1-201ENST00000342245 URB1O60287 2271 aaKnown RBP14.06□□□□□ -0.16
SMPD1-201ENST00000342245 MED14OSP0DP75 135 aa14.06□□□□□ -0.16
SMPD1-201ENST00000342245 C9orf47Q6ZRZ4 202 aa14.06□□□□□ -0.16
SMPD1-201ENST00000342245 FANCD2OSQ96PS1 177 aa14.06□□□□□ -0.16
SMPD1-201ENST00000342245 TP53TG1Q9Y2A0 90 aa14.06□□□□□ -0.16
SMPD1-201ENST00000342245 ZNF256Q9Y2P7 627 aaPredicted RBP14.06□□□□□ -0.16
SMPD1-201ENST00000342245 LENEPQ9Y5L5 61 aa14.06□□□□□ -0.16
SMPD1-201ENST00000342245 LINC00643Q86TS7 51 aa14.05□□□□□ -0.16
SMPD1-201ENST00000342245 PRSS33Q8NF86 280 aa14.05□□□□□ -0.16
SMPD1-201ENST00000342245 ICOSQ9Y6W8 199 aa14.05□□□□□ -0.16
SMPD1-201ENST00000342245 TMEM223A0PJW6 202 aa14.04□□□□□ -0.16
SMPD1-201ENST00000342245 CXCL5P42830 114 aa14.04□□□□□ -0.16
SMPD1-201ENST00000342245 ADIPOQQ15848 244 aa14.04□□□□□ -0.16
SMPD1-201ENST00000342245 LYPD2Q6UXB3 125 aa14.04□□□□□ -0.16
SMPD1-201ENST00000342245 C14orf178Q8N769 122 aaPredicted RBP14.04□□□□□ -0.16
SMPD1-201ENST00000342245 NBR2O15453 112 aa14.04□□□□□ -0.16
SMPD1-201ENST00000342245 DUX3Q96PT4 197 aa14.04□□□□□ -0.16
SMPD1-201ENST00000342245 MSRB2Q9Y3D2 182 aa14.04□□□□□ -0.16
SMPD1-201ENST00000342245 A0A0G2JNJ9 132 aa14.03□□□□□ -0.16
SMPD1-201ENST00000342245 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.03□□□□□ -0.16
SMPD1-201ENST00000342245 BEX4Q9NWD9 120 aaPredicted RBP14.03□□□□□ -0.16
SMPD1-201ENST00000342245 Q9UFV3 132 aa14.03□□□□□ -0.16
SMPD1-201ENST00000342245 S4R3C0 116 aa14.03□□□□□ -0.16
SMPD1-201ENST00000342245 ZNRF2Q8NHG8 242 aa14.03□□□□□ -0.16
SMPD1-201ENST00000342245 CACNA1GO43497 2377 aa14.03□□□□□ -0.16
SMPD1-201ENST00000342245 LST1O00453 97 aa14.02□□□□□ -0.16
SMPD1-201ENST00000342245 PLA2G2CQ5R387 149 aa14.02□□□□□ -0.16
SMPD1-201ENST00000342245 COX7CP15954 63 aa14.02□□□□□ -0.17
SMPD1-201ENST00000342245 NPBQ8NG41 125 aa14.02□□□□□ -0.17
SMPD1-201ENST00000342245 CTSGP08311 255 aa14.01□□□□□ -0.17
SMPD1-201ENST00000342245 MGPP08493 103 aa14.01□□□□□ -0.17
SMPD1-201ENST00000342245 CRYGAP11844 174 aa14.01□□□□□ -0.17
SMPD1-201ENST00000342245 GPHB5Q86YW7 130 aa14.01□□□□□ -0.17
SMPD1-201ENST00000342245 IGHV4OR15-8A0A075B7B6 117 aa14.01□□□□□ -0.17
SMPD1-201ENST00000342245 A0A087WW49 117 aa14.01□□□□□ -0.17
SMPD1-201ENST00000342245 TRAV17A0A0B4J275 112 aa14.01□□□□□ -0.17
SMPD1-201ENST00000342245 MBD3L4A6NDZ8 208 aaPredicted RBP14.01□□□□□ -0.17
SMPD1-201ENST00000342245 MBD3L3A6NE82 208 aaPredicted RBP14.01□□□□□ -0.17
SMPD1-201ENST00000342245 MBD3L5A6NJ08 208 aaPredicted RBP14.01□□□□□ -0.17
SMPD1-201ENST00000342245 RNF182Q8N6D2 247 aa14.01□□□□□ -0.17
SMPD1-201ENST00000342245 MBD3L2Q8NHZ7 208 aaPredicted RBP14.01□□□□□ -0.17
SMPD1-201ENST00000342245 PHLDA3Q9Y5J5 127 aa14.01□□□□□ -0.17
SMPD1-201ENST00000342245 VCYO14598 125 aa14□□□□□ -0.17
SMPD1-201ENST00000342245 BUB3O43684 328 aa14□□□□□ -0.17
SMPD1-201ENST00000342245 IGHV1-69P01742 117 aa14□□□□□ -0.17
SMPD1-201ENST00000342245 GAGE2AQ6NT46 116 aa14□□□□□ -0.17
SMPD1-201ENST00000342245 NBEAQ8NFP9 2946 aa14□□□□□ -0.17
SMPD1-201ENST00000342245 S100A4P26447 101 aaKnown RBP13.99□□□□□ -0.17
SMPD1-201ENST00000342245 LY6LH3BQJ8 138 aa13.99□□□□□ -0.17
SMPD1-201ENST00000342245 CEMP1Q6PRD7 247 aaPredicted RBP13.99□□□□□ -0.17
SMPD1-201ENST00000342245 CCL17Q92583 94 aa13.98□□□□□ -0.17
SMPD1-201ENST00000342245 ZFAND3Q9H8U3 227 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms