RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 MANBALQ9NQG1 85 aa7.34□□□□□ -1.23
TPM3-207ENST00000341372 TMEM189A5PLL7 270 aa7.34□□□□□ -1.24
TPM3-207ENST00000341372 SNAPINO95295 136 aa7.34□□□□□ -1.24
TPM3-207ENST00000341372 CBLN2Q8IUK8 224 aa7.34□□□□□ -1.24
TPM3-207ENST00000341372 EXOC3-AS1Q8N2X6 119 aa7.34□□□□□ -1.24
TPM3-207ENST00000341372 Q9HAA7 133 aa7.34□□□□□ -1.24
TPM3-207ENST00000341372 C7orf77A4D0Y5 90 aa7.33□□□□□ -1.24
TPM3-207ENST00000341372 PRB4P10163 310 aaPredicted RBP7.33□□□□□ -1.24
TPM3-207ENST00000341372 CEBPGP53567 150 aa7.33□□□□□ -1.24
TPM3-207ENST00000341372 CEMP1Q6PRD7 247 aaPredicted RBP7.33□□□□□ -1.24
TPM3-207ENST00000341372 FAM19A4Q96LR4 140 aa7.33□□□□□ -1.24
TPM3-207ENST00000341372 C20orf144Q9BQM9 153 aa7.33□□□□□ -1.24
TPM3-207ENST00000341372 C11orf94C9JXX5 98 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 IFNA1P01562 189 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 CT45A10P0DMU9 189 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 NANOS2P60321 138 aaKnown RBP7.32□□□□□ -1.24
TPM3-207ENST00000341372 C9orf47Q6ZRZ4 202 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 TMEM256Q8N2U0 113 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 CELA1Q9UNI1 258 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 TRAV12-2A0A075B6T6 113 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 IGHV3OR16-12A0A075B7B8 117 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 TMEM250H0YL14 139 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 TSPOP30536 169 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 LINC00477Q96M19 166 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 Q9H3A6 140 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 SDF2L1Q9HCN8 221 aa7.32□□□□□ -1.24
TPM3-207ENST00000341372 RYR3Q15413 4870 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 LCE6AA0A183 80 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 RBAKDNA6NC62 111 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 LEPP41159 167 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 LAGE3Q14657 143 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 RRN3P1Q2M238 152 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 GFI1BQ5VTD9 330 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.31□□□□□ -1.24
TPM3-207ENST00000341372 FAM218AQ96MZ4 157 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 DERL1Q9BUN8 251 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 PARLQ9H300 379 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 RYR2Q92736 4967 aa7.31□□□□□ -1.24
TPM3-207ENST00000341372 TRBV20OR9-2A0A075B6H5 130 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 TRBV7-9A0A0J9YWB2 115 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 TEX48A0A1B0GUV7 120 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 KLLNB2CW77 178 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 SLC25A5P05141 298 aaKnown RBP7.3□□□□□ -1.24
TPM3-207ENST00000341372 CRISP2P16562 243 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 YPEL4Q96NS1 127 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 TMEM208Q9BTX3 173 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 AGPAT4-IT1Q9H0P7 198 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 OTORQ9NRC9 128 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 IGKV2-40A0A087WW87 121 aaPredicted RBP7.3□□□□□ -1.24
TPM3-207ENST00000341372 SCO2A0A1W2PP80 73 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 ZNF727A8MUV8 499 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 GGTLC3B5MD39 225 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 IGKV2D-40P01614 121 aaPredicted RBP7.3□□□□□ -1.24
TPM3-207ENST00000341372 TAS2R60P59551 318 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 RANP62826 216 aaKnown RBP7.3□□□□□ -1.24
TPM3-207ENST00000341372 ERCC8Q13216 396 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 C10orf25Q5T742 122 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 ISOC2Q96AB3 205 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 TVP23CQ96ET8 276 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 RPS10P5Q9NQ39 176 aa7.3□□□□□ -1.24
TPM3-207ENST00000341372 KLK5Q9Y337 293 aaPredicted RBP7.3□□□□□ -1.24
TPM3-207ENST00000341372 PLAC8L1A1L4L8 177 aa7.29□□□□□ -1.24
TPM3-207ENST00000341372 COLCA2A8K830 154 aa7.29□□□□□ -1.24
TPM3-207ENST00000341372 H7BYZ3 331 aa7.29□□□□□ -1.24
TPM3-207ENST00000341372 M0R036 132 aa7.29□□□□□ -1.24
TPM3-207ENST00000341372 SPART-AS1P0CW21 52 aa7.29□□□□□ -1.24
TPM3-207ENST00000341372 GATA1P15976 413 aaPredicted RBP7.29□□□□□ -1.24
TPM3-207ENST00000341372 C12orf74Q32Q52 190 aa7.29□□□□□ -1.24
TPM3-207ENST00000341372 Q6ZTC4 211 aa7.29□□□□□ -1.24
TPM3-207ENST00000341372 C11orf52Q96A22 123 aa7.29□□□□□ -1.24
TPM3-207ENST00000341372 URGCP-MRPS24S4R325 110 aa7.29□□□□□ -1.24
TPM3-207ENST00000341372 ZNF705GA8MUZ8 300 aaPredicted RBP7.28□□□□□ -1.24
TPM3-207ENST00000341372 CSN1S1P47710 185 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 RPL23P62829 140 aaKnown RBP7.28□□□□□ -1.24
TPM3-207ENST00000341372 ZFAND2AQ8N6M9 145 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 VGLL1Q99990 258 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 SMIM7Q9BQ49 75 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 TMEM167BQ9NRX6 74 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 ZNF492Q9P255 531 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 ARL2-SNX15V9GYD0 113 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 TRAV10A0A0B4J240 114 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 PDE6DO43924 150 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 RHEBQ15382 184 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 TMEM78Q5T7P6 136 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 FAM222AQ5U5X8 452 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 C16orf74Q96GX8 76 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 LINC01587Q99440 93 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 TXNDC17Q9BRA2 123 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 LINC00467Q9BRT7 94 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 LENEPQ9Y5L5 61 aa7.28□□□□□ -1.24
TPM3-207ENST00000341372 A0A1W2PRE2 83 aa7.27□□□□□ -1.25
TPM3-207ENST00000341372 C7orf71A4D174 169 aa7.27□□□□□ -1.25
TPM3-207ENST00000341372 PGPA6NDG6 321 aa7.27□□□□□ -1.25
TPM3-207ENST00000341372 LYRM9A8MSI8 78 aa7.27□□□□□ -1.25
TPM3-207ENST00000341372 F6UZH7 168 aa7.27□□□□□ -1.25
TPM3-207ENST00000341372 PRM2P04554 102 aa7.27□□□□□ -1.25
TPM3-207ENST00000341372 AZU1P20160 251 aa7.27□□□□□ -1.25
TPM3-207ENST00000341372 ZNF138P52744 262 aa7.27□□□□□ -1.25
TPM3-207ENST00000341372 TCTAP57738 103 aa7.27□□□□□ -1.25
TPM3-207ENST00000341372 TMEM241Q24JQ0 296 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms