RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 CT45A10P0DMU9 189 aa11.65□□□□□ -0.54
BRAT1-201ENST00000340611 LOC107984156A0A0G2JMH3 177 aa11.65□□□□□ -0.54
BRAT1-201ENST00000340611 G3V318 75 aa11.65□□□□□ -0.54
BRAT1-201ENST00000340611 SUB1P53999 127 aaKnown RBP eCLIP11.65□□□□□ -0.54
BRAT1-201ENST00000340611 ECSCRQ19T08 205 aa11.65□□□□□ -0.54
BRAT1-201ENST00000340611 CT83Q5H943 113 aa11.65□□□□□ -0.54
BRAT1-201ENST00000340611 FAM159AQ6UWV7 190 aa11.65□□□□□ -0.54
BRAT1-201ENST00000340611 ARL17AQ8IVW1 177 aa11.65□□□□□ -0.54
BRAT1-201ENST00000340611 IFI27L1Q96BM0 104 aa11.65□□□□□ -0.54
BRAT1-201ENST00000340611 RNF5Q99942 180 aa11.65□□□□□ -0.54
BRAT1-201ENST00000340611 ZNF492Q9P255 531 aa11.65□□□□□ -0.54
BRAT1-201ENST00000340611 IGHV3-23P01764 117 aa11.64□□□□□ -0.55
BRAT1-201ENST00000340611 GP9P14770 177 aa11.64□□□□□ -0.55
BRAT1-201ENST00000340611 BLCAPP62952 87 aa11.64□□□□□ -0.55
BRAT1-201ENST00000340611 Q86TA4 180 aa11.64□□□□□ -0.55
BRAT1-201ENST00000340611 CARD19Q96LW7 228 aa11.64□□□□□ -0.55
BRAT1-201ENST00000340611 HIST1H4GQ99525 98 aa11.64□□□□□ -0.55
BRAT1-201ENST00000340611 RASL11BQ9BPW5 248 aa11.64□□□□□ -0.55
BRAT1-201ENST00000340611 HIVEP1P15822 2718 aa11.64□□□□□ -0.55
BRAT1-201ENST00000340611 BAHCC1Q9P281 2608 aa11.64□□□□□ -0.55
BRAT1-201ENST00000340611 A0A087WX48 190 aa11.63□□□□□ -0.55
BRAT1-201ENST00000340611 EGR2P11161 476 aaPredicted RBP11.63□□□□□ -0.55
BRAT1-201ENST00000340611 NDUFV3P56181 108 aaKnown RBP11.63□□□□□ -0.55
BRAT1-201ENST00000340611 TTC32Q5I0X7 151 aa11.63□□□□□ -0.55
BRAT1-201ENST00000340611 ATP6V0E1O15342 81 aa11.63□□□□□ -0.55
BRAT1-201ENST00000340611 RRN3P1Q2M238 152 aa11.63□□□□□ -0.55
BRAT1-201ENST00000340611 GFRA4Q9GZZ7 299 aa11.63□□□□□ -0.55
BRAT1-201ENST00000340611 HAX1O00165 279 aa11.62□□□□□ -0.55
BRAT1-201ENST00000340611 LYZP61626 148 aa11.62□□□□□ -0.55
BRAT1-201ENST00000340611 GAGE2BQ13066 116 aa11.62□□□□□ -0.55
BRAT1-201ENST00000340611 GAGE2EQ4V326 116 aa11.62□□□□□ -0.55
BRAT1-201ENST00000340611 GAGE2DQ9UEU5 116 aa11.62□□□□□ -0.55
BRAT1-201ENST00000340611 A0A1B0GUT8 65 aa11.62□□□□□ -0.55
BRAT1-201ENST00000340611 D6R8Y8 96 aa11.62□□□□□ -0.55
BRAT1-201ENST00000340611 C5orf56Q8N8D9 126 aa11.62□□□□□ -0.55
BRAT1-201ENST00000340611 ZNF785A8K8V0 405 aa11.61□□□□□ -0.55
BRAT1-201ENST00000340611 SMKR1H3BMG3 65 aa11.61□□□□□ -0.55
BRAT1-201ENST00000340611 EVI2AP22794 236 aa11.61□□□□□ -0.55
BRAT1-201ENST00000340611 MEIG1Q5JSS6 88 aa11.61□□□□□ -0.55
BRAT1-201ENST00000340611 ZFP2Q6ZN57 461 aa11.61□□□□□ -0.55
BRAT1-201ENST00000340611 MAPKAPK5-AS1Q8N8E1 139 aa11.61□□□□□ -0.55
BRAT1-201ENST00000340611 RAX2Q96IS3 184 aa11.61□□□□□ -0.55
BRAT1-201ENST00000340611 TRAV4A0A0B4J268 109 aa11.6□□□□□ -0.55
BRAT1-201ENST00000340611 PRSS1P07477 247 aa11.6□□□□□ -0.55
BRAT1-201ENST00000340611 CFAP126Q5VTH2 177 aa11.6□□□□□ -0.55
BRAT1-201ENST00000340611 IGLV2-11P01706 119 aa11.6□□□□□ -0.55
BRAT1-201ENST00000340611 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
BRAT1-201ENST00000340611 HIVEP2P31629 2446 aa11.6□□□□□ -0.55
BRAT1-201ENST00000340611 INS-IGF2F8WCM5 200 aa11.59□□□□□ -0.55
BRAT1-201ENST00000340611 CRLF1O75462 422 aa11.59□□□□□ -0.55
BRAT1-201ENST00000340611 KRTAP1-1Q07627 177 aa11.59□□□□□ -0.55
BRAT1-201ENST00000340611 ZC2HC1BQ5TFG8 222 aa11.59□□□□□ -0.55
BRAT1-201ENST00000340611 ANK3Q12955 4377 aaKnown RBP11.59□□□□□ -0.55
BRAT1-201ENST00000340611 TMEM160Q9NX00 188 aa11.59□□□□□ -0.55
BRAT1-201ENST00000340611 J3QLI3 93 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 HBDP02042 147 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 FANCD2OSQ96PS1 177 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 TRGV9Q99603 122 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 FOXC2Q99958 501 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 HIGD1AQ9Y241 93 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 MOB4Q9Y3A3 225 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 IGHV3-35A0A0C4DH35 117 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 A6NDX4 124 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 RIGQ13278 110 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 PPDPFLQ8WWR9 84 aa11.58□□□□□ -0.56
BRAT1-201ENST00000340611 IFITM1P13164 125 aa11.57□□□□□ -0.56
BRAT1-201ENST00000340611 OTORQ9NRC9 128 aa11.57□□□□□ -0.56
BRAT1-201ENST00000340611 HIGD1BQ9P298 99 aa11.57□□□□□ -0.56
BRAT1-201ENST00000340611 HOXA3O43365 443 aaPredicted RBP11.57□□□□□ -0.56
BRAT1-201ENST00000340611 SNCGO76070 127 aa11.57□□□□□ -0.56
BRAT1-201ENST00000340611 ZNF688P0C7X2 276 aa11.57□□□□□ -0.56
BRAT1-201ENST00000340611 Q6ZQT7 251 aa11.57□□□□□ -0.56
BRAT1-201ENST00000340611 IGHV3OR16-8A0A075B7F1 116 aa11.56□□□□□ -0.56
BRAT1-201ENST00000340611 TMEM213A2RRL7 107 aa11.56□□□□□ -0.56
BRAT1-201ENST00000340611 K7EIM0 57 aa11.56□□□□□ -0.56
BRAT1-201ENST00000340611 FSHBP01225 129 aa11.56□□□□□ -0.56
BRAT1-201ENST00000340611 AMN1Q8IY45 258 aa11.56□□□□□ -0.56
BRAT1-201ENST00000340611 DLX4Q92988 240 aaPredicted RBP11.56□□□□□ -0.56
BRAT1-201ENST00000340611 NIPBLQ6KC79 2804 aaeCLIP11.56□□□□□ -0.56
BRAT1-201ENST00000340611 I3L2K1 104 aa11.56□□□□□ -0.56
BRAT1-201ENST00000340611 RHODO00212 210 aa11.56□□□□□ -0.56
BRAT1-201ENST00000340611 SLC25A39Q9BZJ4 359 aaPredicted RBP11.56□□□□□ -0.56
BRAT1-201ENST00000340611 HIST2H2BDQ6DRA6 164 aa11.56□□□□□ -0.56
BRAT1-201ENST00000340611 HHLA3Q9XRX5 114 aa11.56□□□□□ -0.56
BRAT1-201ENST00000340611 WI2-2373I1.2A0A1W2PRP0 233 aa11.55□□□□□ -0.56
BRAT1-201ENST00000340611 M0R3E3 92 aa11.55□□□□□ -0.56
BRAT1-201ENST00000340611 IL4P05112 153 aa11.55□□□□□ -0.56
BRAT1-201ENST00000340611 CRIP1P50238 77 aa11.55□□□□□ -0.56
BRAT1-201ENST00000340611 C10orf99Q6UWK7 81 aa11.55□□□□□ -0.56
BRAT1-201ENST00000340611 TEP1Q99973 2627 aaKnown RBP11.55□□□□□ -0.56
BRAT1-201ENST00000340611 TRAV8-2A0A0B4J237 113 aa11.55□□□□□ -0.56
BRAT1-201ENST00000340611 MRPL23Q16540 153 aaKnown RBP11.55□□□□□ -0.56
BRAT1-201ENST00000340611 MORN3Q6PF18 240 aaPredicted RBP11.55□□□□□ -0.56
BRAT1-201ENST00000340611 MAP1LC3AQ9H492 121 aa11.55□□□□□ -0.56
BRAT1-201ENST00000340611 LINC01549A6NIU2 74 aa11.54□□□□□ -0.56
BRAT1-201ENST00000340611 C8orf49Q96NF6 230 aa11.54□□□□□ -0.56
BRAT1-201ENST00000340611 LOC107984640A0A0U1RRK4 108 aa11.54□□□□□ -0.56
BRAT1-201ENST00000340611 ATP6V0E2Q8NHE4 81 aa11.54□□□□□ -0.56
BRAT1-201ENST00000340611 FN1P02751 2386 aaKnown RBP11.54□□□□□ -0.56
BRAT1-201ENST00000340611 IGLV11-55A0A075B6I3 123 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms