RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 Q6YL49 198 aa9.74□□□□□ -0.85
CDK5RAP1-201ENST00000339269 OR2K2Q8NGT1 345 aa9.74□□□□□ -0.85
CDK5RAP1-201ENST00000339269 MS4A6AQ9H2W1 248 aa9.74□□□□□ -0.85
CDK5RAP1-201ENST00000339269 VPREB3Q9UKI3 123 aa9.74□□□□□ -0.85
CDK5RAP1-201ENST00000339269 TRAV21A0A0B4J279 112 aa9.73□□□□□ -0.85
CDK5RAP1-201ENST00000339269 FGF6P10767 208 aa9.73□□□□□ -0.85
CDK5RAP1-201ENST00000339269 CACNG7P62955 275 aa9.73□□□□□ -0.85
CDK5RAP1-201ENST00000339269 RNASE8Q8TDE3 154 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP1-201ENST00000339269 SMR3AQ99954 134 aa9.73□□□□□ -0.85
CDK5RAP1-201ENST00000339269 MTORP42345 2549 aa9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 TRBV7-9A0A0J9YWB2 115 aa9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 KLLNB2CW77 178 aa9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 RNASE3P12724 160 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 WFDC3Q8IUB2 231 aa9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 IFI27L1Q96BM0 104 aa9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 NXT2Q9NPJ8 142 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 RNASE4P34096 147 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 C2orf91Q6ZV80 131 aa9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 Q8N8P6 123 aa9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 UFC1Q9Y3C8 167 aa9.72□□□□□ -0.85
CDK5RAP1-201ENST00000339269 GNRH2O43555 120 aa9.71□□□□□ -0.85
CDK5RAP1-201ENST00000339269 FCER1GP30273 86 aa9.71□□□□□ -0.85
CDK5RAP1-201ENST00000339269 LEPP41159 167 aa9.71□□□□□ -0.85
CDK5RAP1-201ENST00000339269 SPANXN1Q5VSR9 72 aa9.71□□□□□ -0.85
CDK5RAP1-201ENST00000339269 SLC25A34Q6PIV7 304 aa9.71□□□□□ -0.85
CDK5RAP1-201ENST00000339269 CSTL1Q9H114 145 aa9.71□□□□□ -0.85
CDK5RAP1-201ENST00000339269 NXPH4O95158 308 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 MED14OSP0DP75 135 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 COX8AP10176 69 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 Q6ZVH6 145 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 RNF152Q8N8N0 203 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 DKK2Q9UBU2 259 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 A0A087WW49 117 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 CD5LO43866 347 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 ADAMTSL5Q6ZMM2 481 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 TMEM158Q8WZ71 300 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 DPF1Q92782 380 aa9.7□□□□□ -0.86
CDK5RAP1-201ENST00000339269 HOXA3O43365 443 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP1-201ENST00000339269 LGALS1P09382 135 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP1-201ENST00000339269 ASIPP42127 132 aa9.69□□□□□ -0.86
CDK5RAP1-201ENST00000339269 MPV17L2Q567V2 206 aa9.69□□□□□ -0.86
CDK5RAP1-201ENST00000339269 RASL10AQ92737 203 aa9.69□□□□□ -0.86
CDK5RAP1-201ENST00000339269 C18orf15Q96N68 181 aa9.69□□□□□ -0.86
CDK5RAP1-201ENST00000339269 ZMAT4Q9H898 229 aa9.69□□□□□ -0.86
CDK5RAP1-201ENST00000339269 SONP18583 2426 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP1-201ENST00000339269 NSD1Q96L73 2696 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP1-201ENST00000339269 M0R381 172 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 LY6G6DO95868 133 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 LINC00315P59091 139 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 BVES-AS1Q5T3Y7 98 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 C18orf65Q6ZTR6 163 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 MRAP2Q96G30 205 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 ANK3Q12955 4377 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 MUC4Q99102 2169 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 K7EQG2 157 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 ELANEP08246 267 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 SYNJ2BPP57105 145 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 Q8N2B8 174 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 POM121L12Q8N7R1 296 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 KIF25-AS1Q9Y6Z4 181 aa9.68□□□□□ -0.86
CDK5RAP1-201ENST00000339269 HIVEP2P31629 2446 aa9.67□□□□□ -0.86
CDK5RAP1-201ENST00000339269 LGALS9O00182 355 aa9.67□□□□□ -0.86
CDK5RAP1-201ENST00000339269 ZNF479Q96JC4 524 aa9.67□□□□□ -0.86
CDK5RAP1-201ENST00000339269 NIPBLQ6KC79 2804 aaeCLIP9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 A0A0J9YX75 114 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 ZNF688P0C7X2 276 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 KRTAP1-1Q07627 177 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 C14orf178Q8N769 122 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 RPL39LQ96EH5 51 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 SPXQ9BT56 116 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 SMIM2Q9BVW6 85 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 NUDT3O95989 172 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 ID1P41134 155 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 SAMD13Q5VXD3 122 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 BOD1L2Q8IYS8 172 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 UBE2E2Q96LR5 201 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 DUX5Q96PT3 197 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 ODF3Q96PU9 254 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 HHLA3Q9XRX5 114 aa9.66□□□□□ -0.86
CDK5RAP1-201ENST00000339269 SETD2Q9BYW2 2564 aaPredicted RBP9.65□□□□□ -0.86
CDK5RAP1-201ENST00000339269 SMIM17P0DL12 118 aa9.65□□□□□ -0.86
CDK5RAP1-201ENST00000339269 LAGE3Q14657 143 aa9.65□□□□□ -0.86
CDK5RAP1-201ENST00000339269 PSMG4Q5JS54 123 aa9.65□□□□□ -0.86
CDK5RAP1-201ENST00000339269 OR1N2Q8NGR9 330 aa9.65□□□□□ -0.86
CDK5RAP1-201ENST00000339269 DPH3P1Q9H4G8 78 aa9.65□□□□□ -0.86
CDK5RAP1-201ENST00000339269 S100A4P26447 101 aaKnown RBP9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 TCTAP57738 103 aa9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 TCTEX1D4Q5JR98 221 aa9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 JPT2Q9H910 190 aa9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 YAE1D1Q9NRH1 226 aa9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 PHLDA3Q9Y5J5 127 aa9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 COX11Q9Y6N1 276 aa9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 C7orf71A4D174 169 aa9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 SCGB2A2Q13296 93 aa9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 PCP2Q8IVA1 136 aa9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 ORAOV1Q8WV07 137 aa9.64□□□□□ -0.87
CDK5RAP1-201ENST00000339269 IGKV2D-26A0A0A0MRZ7 120 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms