RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 DSCR9P59020 149 aa14.33□□□□□ -0.12
PSPC1-201ENST00000338910 LY6EQ16553 131 aa14.33□□□□□ -0.12
PSPC1-201ENST00000338910 MOB4Q9Y3A3 225 aa14.33□□□□□ -0.12
PSPC1-201ENST00000338910 B4DSR2 109 aa14.32□□□□□ -0.12
PSPC1-201ENST00000338910 TRGV3P03979 118 aa14.32□□□□□ -0.12
PSPC1-201ENST00000338910 CLEC19AQ6UXS0 136 aa14.32□□□□□ -0.12
PSPC1-201ENST00000338910 ERCC8Q13216 396 aa14.32□□□□□ -0.12
PSPC1-201ENST00000338910 MORN3Q6PF18 240 aaPredicted RBP14.32□□□□□ -0.12
PSPC1-201ENST00000338910 APCP25054 2843 aa14.32□□□□□ -0.12
PSPC1-201ENST00000338910 IL17RELQ6ZVW7 336 aa14.31□□□□□ -0.12
PSPC1-201ENST00000338910 C20orf78Q9BR46 151 aa14.31□□□□□ -0.12
PSPC1-201ENST00000338910 IGKV3D-20A0A0C4DH25 116 aa14.31□□□□□ -0.12
PSPC1-201ENST00000338910 AVPP01185 164 aa14.31□□□□□ -0.12
PSPC1-201ENST00000338910 MRAP2Q96G30 205 aa14.31□□□□□ -0.12
PSPC1-201ENST00000338910 APOMO95445 188 aa14.3□□□□□ -0.12
PSPC1-201ENST00000338910 MAPK1IP1LQ8NDC0 245 aa14.3□□□□□ -0.12
PSPC1-201ENST00000338910 CCDC140Q96MF4 163 aa14.3□□□□□ -0.12
PSPC1-201ENST00000338910 KMT2BQ9UMN6 2715 aaPredicted RBP14.3□□□□□ -0.12
PSPC1-201ENST00000338910 PRAC2D3DTV9 90 aa14.3□□□□□ -0.12
PSPC1-201ENST00000338910 SLC25A16P16260 332 aa14.3□□□□□ -0.12
PSPC1-201ENST00000338910 DOPEY2Q9Y3R5 2298 aa14.29□□□□□ -0.12
PSPC1-201ENST00000338910 MYMXA0A1B0GTQ4 84 aa14.29□□□□□ -0.12
PSPC1-201ENST00000338910 F8VRH5 84 aa14.29□□□□□ -0.12
PSPC1-201ENST00000338910 FOXI1Q12951 378 aa14.29□□□□□ -0.12
PSPC1-201ENST00000338910 C11orf21Q9P2W6 132 aa14.29□□□□□ -0.12
PSPC1-201ENST00000338910 TRAV12-1A0A0B4J245 112 aa14.29□□□□□ -0.12
PSPC1-201ENST00000338910 TRAV26-2A0A0B4J265 109 aa14.29□□□□□ -0.12
PSPC1-201ENST00000338910 TRAV41A0A0B4J266 112 aa14.29□□□□□ -0.12
PSPC1-201ENST00000338910 H3BUX3 64 aa14.29□□□□□ -0.12
PSPC1-201ENST00000338910 C1QTNF4Q9BXJ3 329 aa14.29□□□□□ -0.12
PSPC1-201ENST00000338910 H7C1H1 209 aa14.28□□□□□ -0.12
PSPC1-201ENST00000338910 KLK9Q2XQG4 91 aa14.28□□□□□ -0.12
PSPC1-201ENST00000338910 CFAP126Q5VTH2 177 aa14.28□□□□□ -0.12
PSPC1-201ENST00000338910 ATP6V0E2Q8NHE4 81 aa14.28□□□□□ -0.12
PSPC1-201ENST00000338910 CDIP1Q9H305 208 aa14.28□□□□□ -0.12
PSPC1-201ENST00000338910 KLK9Q9UKQ9 250 aa14.28□□□□□ -0.12
PSPC1-201ENST00000338910 OR11H12B2RN74 326 aa14.27□□□□□ -0.12
PSPC1-201ENST00000338910 SMCPP49901 116 aaPredicted RBP14.27□□□□□ -0.12
PSPC1-201ENST00000338910 OR11H1Q8NG94 326 aa14.27□□□□□ -0.12
PSPC1-201ENST00000338910 OR11H2Q8NH07 326 aa14.27□□□□□ -0.12
PSPC1-201ENST00000338910 EEF1AKMT3Q96AZ1 226 aa14.27□□□□□ -0.12
PSPC1-201ENST00000338910 MRPL16Q9NX20 251 aaKnown RBP14.27□□□□□ -0.12
PSPC1-201ENST00000338910 TRAV26-1A0A087WT03 109 aa14.27□□□□□ -0.13
PSPC1-201ENST00000338910 A0A096LNT2 108 aa14.27□□□□□ -0.13
PSPC1-201ENST00000338910 IGHV3-66A0A0C4DH42 116 aa14.27□□□□□ -0.13
PSPC1-201ENST00000338910 HOXA3O43365 443 aaPredicted RBP14.27□□□□□ -0.13
PSPC1-201ENST00000338910 IGHV3OR16-13A0A075B7E8 117 aa14.26□□□□□ -0.13
PSPC1-201ENST00000338910 IGHV3-74A0A0B4J1X5 117 aa14.26□□□□□ -0.13
PSPC1-201ENST00000338910 ZFAND3Q9H8U3 227 aa14.26□□□□□ -0.13
PSPC1-201ENST00000338910 PGPEP1Q9NXJ5 209 aa14.26□□□□□ -0.13
PSPC1-201ENST00000338910 CYSLTR1Q9Y271 337 aa14.26□□□□□ -0.13
PSPC1-201ENST00000338910 IGHV7-4-1A0A0J9YVY3 117 aa14.26□□□□□ -0.13
PSPC1-201ENST00000338910 LCNL1Q6ZST4 164 aa14.26□□□□□ -0.13
PSPC1-201ENST00000338910 SYT8Q8NBV8 401 aa14.26□□□□□ -0.13
PSPC1-201ENST00000338910 HELZ2Q9BYK8 2649 aaKnown RBP14.26□□□□□ -0.13
PSPC1-201ENST00000338910 RBAKDNA6NC62 111 aa14.25□□□□□ -0.13
PSPC1-201ENST00000338910 LGALS1P09382 135 aaKnown RBP14.25□□□□□ -0.13
PSPC1-201ENST00000338910 C8orf86Q6ZUL3 223 aa14.25□□□□□ -0.13
PSPC1-201ENST00000338910 CREBBPQ92793 2442 aa14.25□□□□□ -0.13
PSPC1-201ENST00000338910 TRBV7-1A0A0A6YYK4 115 aa14.25□□□□□ -0.13
PSPC1-201ENST00000338910 GEMIN7Q9H840 131 aaKnown RBP14.25□□□□□ -0.13
PSPC1-201ENST00000338910 UFC1Q9Y3C8 167 aa14.25□□□□□ -0.13
PSPC1-201ENST00000338910 IGHV3-49A0A0A0MS15 119 aa14.24□□□□□ -0.13
PSPC1-201ENST00000338910 BLCAPP62952 87 aa14.24□□□□□ -0.13
PSPC1-201ENST00000338910 NFE4Q86UQ8 179 aa14.24□□□□□ -0.13
PSPC1-201ENST00000338910 RNF182Q8N6D2 247 aa14.24□□□□□ -0.13
PSPC1-201ENST00000338910 LINC01356Q8N9X3 169 aa14.24□□□□□ -0.13
PSPC1-201ENST00000338910 DLX4Q92988 240 aaPredicted RBP14.24□□□□□ -0.13
PSPC1-201ENST00000338910 TEX15Q9BXT5 2789 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 CLPSL1A2RUU4 121 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 RNF223E7ERA6 249 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 BUB3O43684 328 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 CRYBA4P53673 196 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 C19orf54Q5BKX5 351 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 Q6ZS46 218 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 ZNF418Q8TF45 676 aaPredicted RBP14.23□□□□□ -0.13
PSPC1-201ENST00000338910 SMIM2Q9BVW6 85 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 IGHV4-4A0A075B6R2 117 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 A6NDX4 124 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 TGFAP01135 160 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 GATA3P23771 443 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 FHL3Q13643 280 aa14.23□□□□□ -0.13
PSPC1-201ENST00000338910 ZNF469Q96JG9 3925 aaPredicted RBP14.22□□□□□ -0.13
PSPC1-201ENST00000338910 AGPAT4-IT1Q9H0P7 198 aa14.22□□□□□ -0.13
PSPC1-201ENST00000338910 TMEM78Q5T7P6 136 aa14.22□□□□□ -0.13
PSPC1-201ENST00000338910 NEXN-AS1Q8NBZ9 246 aa14.22□□□□□ -0.13
PSPC1-201ENST00000338910 MXRA5Q9NR99 2828 aa14.22□□□□□ -0.13
PSPC1-201ENST00000338910 SPINK8P0C7L1 97 aa14.21□□□□□ -0.13
PSPC1-201ENST00000338910 UBE2D1P51668 147 aa14.21□□□□□ -0.13
PSPC1-201ENST00000338910 DEFB113Q30KQ7 82 aa14.21□□□□□ -0.13
PSPC1-201ENST00000338910 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.21□□□□□ -0.13
PSPC1-201ENST00000338910 TOMM6Q96B49 74 aa14.21□□□□□ -0.14
PSPC1-201ENST00000338910 SCGB3A1Q96QR1 104 aa14.21□□□□□ -0.14
PSPC1-201ENST00000338910 LINC01549A6NIU2 74 aa14.2□□□□□ -0.14
PSPC1-201ENST00000338910 MT-ATP8P03928 68 aa14.2□□□□□ -0.14
PSPC1-201ENST00000338910 IGF1P05019 195 aa14.2□□□□□ -0.14
PSPC1-201ENST00000338910 CRIP2P52943 208 aaPredicted RBP14.2□□□□□ -0.14
PSPC1-201ENST00000338910 PRADC1Q9BSG0 188 aa14.2□□□□□ -0.14
PSPC1-201ENST00000338910 J3KRW8 73 aa14.2□□□□□ -0.14
PSPC1-201ENST00000338910 IGHG2P01859 326 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms