RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 RPL19P84098 196 aaKnown RBP10.9□□□□□ -0.67
SEC13-201ENST00000337354 ZNF876PQ49A33 203 aa10.9□□□□□ -0.67
SEC13-201ENST00000337354 SCRT2Q9NQ03 307 aa10.9□□□□□ -0.67
SEC13-201ENST00000337354 MRPL16Q9NX20 251 aaKnown RBP10.9□□□□□ -0.67
SEC13-201ENST00000337354 KLK5Q9Y337 293 aaPredicted RBP10.9□□□□□ -0.67
SEC13-201ENST00000337354 ERVFC1-1P60608 527 aa10.89□□□□□ -0.67
SEC13-201ENST00000337354 SSBP4Q9BWG4 385 aaPredicted RBP10.89□□□□□ -0.67
SEC13-201ENST00000337354 RNASE7Q9H1E1 156 aaKnown RBP10.89□□□□□ -0.67
SEC13-201ENST00000337354 DNAH7Q8WXX0 4024 aa10.89□□□□□ -0.67
SEC13-201ENST00000337354 H3BVH4 76 aa10.88□□□□□ -0.67
SEC13-201ENST00000337354 CIDEAO60543 219 aa10.88□□□□□ -0.67
SEC13-201ENST00000337354 RPL23P62829 140 aaKnown RBP10.88□□□□□ -0.67
SEC13-201ENST00000337354 COMMD7Q86VX2 200 aa10.88□□□□□ -0.67
SEC13-201ENST00000337354 SYT8Q8NBV8 401 aa10.88□□□□□ -0.67
SEC13-201ENST00000337354 FAM210BQ96KR6 192 aa10.88□□□□□ -0.67
SEC13-201ENST00000337354 RPP21Q9H633 154 aaKnown RBP10.88□□□□□ -0.67
SEC13-201ENST00000337354 OSTCQ9NRP0 149 aa10.88□□□□□ -0.67
SEC13-201ENST00000337354 PHLDA3Q9Y5J5 127 aa10.88□□□□□ -0.67
SEC13-201ENST00000337354 A0A1W2PPQ1 181 aa10.87□□□□□ -0.67
SEC13-201ENST00000337354 GATCO43716 136 aaKnown RBP10.87□□□□□ -0.67
SEC13-201ENST00000337354 OR5AL1P0C617 328 aa10.87□□□□□ -0.67
SEC13-201ENST00000337354 TCTAP57738 103 aa10.87□□□□□ -0.67
SEC13-201ENST00000337354 CT83Q5H943 113 aa10.87□□□□□ -0.67
SEC13-201ENST00000337354 ISOC2Q96AB3 205 aa10.87□□□□□ -0.67
SEC13-201ENST00000337354 TMEM218A2RU14 115 aa10.86□□□□□ -0.67
SEC13-201ENST00000337354 F2Z2F3 143 aa10.86□□□□□ -0.67
SEC13-201ENST00000337354 SNAI2O43623 268 aa10.86□□□□□ -0.67
SEC13-201ENST00000337354 PNRC1Q12796 327 aaPredicted RBP10.86□□□□□ -0.67
SEC13-201ENST00000337354 SLAQ13239 276 aa10.86□□□□□ -0.67
SEC13-201ENST00000337354 ADIRFQ15847 76 aa10.86□□□□□ -0.67
SEC13-201ENST00000337354 C15orf54Q8N8G6 183 aa10.86□□□□□ -0.67
SEC13-201ENST00000337354 TRAV4A0A0B4J268 109 aa10.85□□□□□ -0.67
SEC13-201ENST00000337354 A8MWL6 223 aa10.85□□□□□ -0.67
SEC13-201ENST00000337354 F5H768 121 aa10.85□□□□□ -0.67
SEC13-201ENST00000337354 IGLC6P0CF74 106 aa10.85□□□□□ -0.67
SEC13-201ENST00000337354 HTN3P15516 51 aa10.85□□□□□ -0.67
SEC13-201ENST00000337354 ZFP82Q8N141 532 aa10.85□□□□□ -0.67
SEC13-201ENST00000337354 OR4C5Q8NGB2 326 aa10.85□□□□□ -0.67
SEC13-201ENST00000337354 SFRP2Q96HF1 295 aa10.85□□□□□ -0.67
SEC13-201ENST00000337354 A8MWV9 139 aa10.84□□□□□ -0.67
SEC13-201ENST00000337354 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
SEC13-201ENST00000337354 FER1L6-AS1Q8NA97 138 aa10.84□□□□□ -0.67
SEC13-201ENST00000337354 FAM231BA6NCW3 169 aa10.83□□□□□ -0.68
SEC13-201ENST00000337354 IGLL5B9A064 214 aa10.83□□□□□ -0.68
SEC13-201ENST00000337354 RS1O15537 224 aa10.83□□□□□ -0.68
SEC13-201ENST00000337354 FOXA3P55318 350 aaPredicted RBP10.83□□□□□ -0.68
SEC13-201ENST00000337354 WDR73Q6P4I2 378 aa10.83□□□□□ -0.68
SEC13-201ENST00000337354 POM121L12Q8N7R1 296 aa10.83□□□□□ -0.68
SEC13-201ENST00000337354 OR10G8Q8NGN5 311 aa10.83□□□□□ -0.68
SEC13-201ENST00000337354 F8W036 122 aa10.82□□□□□ -0.68
SEC13-201ENST00000337354 M0R381 172 aa10.82□□□□□ -0.68
SEC13-201ENST00000337354 GZMBP10144 247 aa10.82□□□□□ -0.68
SEC13-201ENST00000337354 CACNG7P62955 275 aa10.82□□□□□ -0.68
SEC13-201ENST00000337354 SPANXN1Q5VSR9 72 aa10.82□□□□□ -0.68
SEC13-201ENST00000337354 CFAP126Q5VTH2 177 aa10.82□□□□□ -0.68
SEC13-201ENST00000337354 ZNF479Q96JC4 524 aa10.82□□□□□ -0.68
SEC13-201ENST00000337354 SEC11CQ9BY50 192 aa10.82□□□□□ -0.68
SEC13-201ENST00000337354 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
SEC13-201ENST00000337354 STARD9Q9P2P6 4700 aa10.82□□□□□ -0.68
SEC13-201ENST00000337354 IGHV4-4A0A075B6R2 117 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 H3BNG1 76 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 NXPH4O95158 308 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 HOXA5P20719 270 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 FHL2Q14192 279 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 ZFP2Q6ZN57 461 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 OR10AG1Q8NH19 301 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 TSKUQ8WUA8 353 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 TPPP3Q9BW30 176 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 PRO0255Q9UI72 69 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 V9GYV3 84 aa10.81□□□□□ -0.68
SEC13-201ENST00000337354 TRGV4A0A0C4DH28 118 aa10.8□□□□□ -0.68
SEC13-201ENST00000337354 IGHV3-53P01767 116 aa10.8□□□□□ -0.68
SEC13-201ENST00000337354 LYZL1Q6UWQ5 148 aa10.8□□□□□ -0.68
SEC13-201ENST00000337354 HHLA3Q9XRX5 114 aa10.8□□□□□ -0.68
SEC13-201ENST00000337354 PPP1R2P9O14990 202 aa10.79□□□□□ -0.68
SEC13-201ENST00000337354 CTRLP40313 264 aa10.79□□□□□ -0.68
SEC13-201ENST00000337354 TMEM88Q6PEY1 159 aa10.79□□□□□ -0.68
SEC13-201ENST00000337354 C15orf53Q8NAA6 179 aa10.79□□□□□ -0.68
SEC13-201ENST00000337354 GTSF1Q8WW33 167 aa10.79□□□□□ -0.68
SEC13-201ENST00000337354 CNFNQ9BYD5 112 aa10.79□□□□□ -0.68
SEC13-201ENST00000337354 KMT2CQ8NEZ4 4911 aaKnown RBP10.79□□□□□ -0.68
SEC13-201ENST00000337354 TRAV26-1A0A087WT03 109 aa10.78□□□□□ -0.68
SEC13-201ENST00000337354 RHODO00212 210 aa10.78□□□□□ -0.68
SEC13-201ENST00000337354 ADCYAP1P18509 176 aa10.78□□□□□ -0.68
SEC13-201ENST00000337354 MT-ND4LP03901 98 aa10.77□□□□□ -0.68
SEC13-201ENST00000337354 CRYBA4P53673 196 aa10.77□□□□□ -0.68
SEC13-201ENST00000337354 C10orf91Q5T1B1 145 aa10.77□□□□□ -0.68
SEC13-201ENST00000337354 ANAPC16Q96DE5 110 aa10.77□□□□□ -0.68
SEC13-201ENST00000337354 APLNQ9ULZ1 77 aa10.77□□□□□ -0.68
SEC13-201ENST00000337354 MUC21A0A0G2JKD1 596 aa10.77□□□□□ -0.69
SEC13-201ENST00000337354 MUC21A0A140T8X8 626 aa10.77□□□□□ -0.69
SEC13-201ENST00000337354 TRBV6-4A0A1B0GX49 114 aa10.77□□□□□ -0.69
SEC13-201ENST00000337354 HIGD1CA8MV81 97 aa10.77□□□□□ -0.69
SEC13-201ENST00000337354 PAX4O43316 350 aa10.77□□□□□ -0.69
SEC13-201ENST00000337354 CRYGDP07320 174 aa10.77□□□□□ -0.69
SEC13-201ENST00000337354 NTF3P20783 257 aa10.77□□□□□ -0.69
SEC13-201ENST00000337354 UFSP1Q6NVU6 142 aa10.77□□□□□ -0.69
SEC13-201ENST00000337354 BORCS7Q96B45 105 aa10.77□□□□□ -0.69
SEC13-201ENST00000337354 JPT2Q9H910 190 aa10.77□□□□□ -0.69
SEC13-201ENST00000337354 NAT8BQ9UHF3 227 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms