RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 M0QZK8 103 aa6.64□□□□□ -1.35
SNCA-201ENST00000336904 CD7P09564 240 aa6.64□□□□□ -1.35
SNCA-201ENST00000336904 SLC25A16P16260 332 aa6.64□□□□□ -1.35
SNCA-201ENST00000336904 CRIP2P52943 208 aaPredicted RBP6.64□□□□□ -1.35
SNCA-201ENST00000336904 EMP1P54849 157 aa6.64□□□□□ -1.35
SNCA-201ENST00000336904 ZC2HC1BQ5TFG8 222 aa6.64□□□□□ -1.35
SNCA-201ENST00000336904 PPP1R14DQ9NXH3 145 aa6.64□□□□□ -1.35
SNCA-201ENST00000336904 IGKV2D-26A0A0A0MRZ7 120 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 KNCNA6PVL3 124 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 K7EP13 123 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 HOXD3P31249 432 aaPredicted RBP6.63□□□□□ -1.35
SNCA-201ENST00000336904 KLK9Q2XQG4 91 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 DCANP1Q8TF63 244 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 IGHV3-73A0A0B4J1V6 119 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 RNASE3P12724 160 aaKnown RBP6.63□□□□□ -1.35
SNCA-201ENST00000336904 ASIPP42127 132 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 SMIM15Q7Z3B0 74 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 GTSCR1Q86UQ5 136 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 NRACQ8N912 160 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 TMEM160Q9NX00 188 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 VPREB3Q9UKI3 123 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 UNC79Q9P2D8 2635 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 TRAV21A0A0B4J279 112 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 F5H697 171 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 CD5LO43866 347 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 ZNF702PQ9H963 129 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 MDFICQ9P1T7 246 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 PDZD2O15018 2839 aa6.63□□□□□ -1.35
SNCA-201ENST00000336904 DLEU1O43261 78 aa6.62□□□□□ -1.35
SNCA-201ENST00000336904 SRSF2Q01130 221 aaKnown RBP6.62□□□□□ -1.35
SNCA-201ENST00000336904 DEFB113Q30KQ7 82 aa6.62□□□□□ -1.35
SNCA-201ENST00000336904 CNFNQ9BYD5 112 aa6.62□□□□□ -1.35
SNCA-201ENST00000336904 ST20Q9HBF5 79 aa6.62□□□□□ -1.35
SNCA-201ENST00000336904 SMIM17P0DL12 118 aa6.62□□□□□ -1.35
SNCA-201ENST00000336904 C2orf91Q6ZV80 131 aa6.62□□□□□ -1.35
SNCA-201ENST00000336904 OVOL1O14753 267 aa6.61□□□□□ -1.35
SNCA-201ENST00000336904 RASL10AQ92737 203 aa6.61□□□□□ -1.35
SNCA-201ENST00000336904 FN1P02751 2386 aaKnown RBP6.61□□□□□ -1.35
SNCA-201ENST00000336904 FAM159AQ6UWV7 190 aa6.61□□□□□ -1.35
SNCA-201ENST00000336904 RAB37Q96AX2 223 aa6.61□□□□□ -1.35
SNCA-201ENST00000336904 TCTEX1D4Q5JR98 221 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 BVES-AS1Q5T3Y7 98 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 ADAMTSL5Q6ZMM2 481 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 ARL6IP6Q8N6S5 226 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 MRPL53Q96EL3 112 aaKnown RBP6.6□□□□□ -1.35
SNCA-201ENST00000336904 MRPL35Q9NZE8 188 aaKnown RBP6.6□□□□□ -1.35
SNCA-201ENST00000336904 MRPS16Q9Y3D3 137 aaKnown RBP6.6□□□□□ -1.35
SNCA-201ENST00000336904 IGLV2-18A0A075B6J9 118 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 FCER1GP30273 86 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 DSCR9P59020 149 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 APRG1Q8IVJ8 170 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 OR11H1Q8NG94 326 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 NBEAL2Q6ZNJ1 2754 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 Q6YL49 198 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 DPF1Q92782 380 aa6.6□□□□□ -1.35
SNCA-201ENST00000336904 TRAV8-6A0A0B4J262 113 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 H3BUA1 57 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 CCL25O15444 150 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 COX8AP10176 69 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 ODF1Q14990 250 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 Q8N8P6 123 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 ZNF256Q9Y2P7 627 aaPredicted RBP6.59□□□□□ -1.35
SNCA-201ENST00000336904 PPBPP02775 128 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 FGF6P10767 208 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 GATA3P23771 443 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 DEFB131AP59861 70 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 RPL39P62891 51 aaKnown RBP6.59□□□□□ -1.35
SNCA-201ENST00000336904 LAGE3Q14657 143 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 VAMP3Q15836 100 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 KRTAP1-3Q8IUG1 177 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 Q8N1Y9 231 aa6.59□□□□□ -1.35
SNCA-201ENST00000336904 NXT2Q9NPJ8 142 aaKnown RBP6.59□□□□□ -1.35
SNCA-201ENST00000336904 RBMY1A1P0DJD3 496 aaKnown RBP6.58□□□□□ -1.36
SNCA-201ENST00000336904 RBMY1CP0DJD4 496 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 RBMY1FQ15415 496 aaKnown RBP6.58□□□□□ -1.36
SNCA-201ENST00000336904 KLHL30-AS1Q8NEE0 82 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 CSTL1Q9H114 145 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 VWFP04275 2813 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 LGALS1P09382 135 aaKnown RBP6.58□□□□□ -1.36
SNCA-201ENST00000336904 ID1P41134 155 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 PROK1P58294 105 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 SUMO2P61956 95 aaKnown RBP6.58□□□□□ -1.36
SNCA-201ENST00000336904 LGALS9BQ3B8N2 356 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 LGALS9CQ6DKI2 356 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 SMR3AQ99954 134 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 SMIM2Q9BVW6 85 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 Q9UF83 564 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 OTOGQ6ZRI0 2925 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 IGHV3OR16-12A0A075B7B8 117 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 P0DMU3 169 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 FAM231AP0DMU4 169 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 FAM231CP0DMU5 169 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 PTTG1IPP53801 180 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 FAM19A4Q96LR4 140 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 OPRPNQ99935 248 aaPredicted RBP6.58□□□□□ -1.36
SNCA-201ENST00000336904 DPH3P1Q9H4G8 78 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 COX11Q9Y6N1 276 aa6.58□□□□□ -1.36
SNCA-201ENST00000336904 A0A0J9YX75 114 aa6.57□□□□□ -1.36
SNCA-201ENST00000336904 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
SNCA-201ENST00000336904 SNRPD3P62318 126 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms