RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PPP1R17O96001 155 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 AZU1P20160 251 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 SUMO2P61956 95 aaKnown RBP9.17□□□□□ -0.94
HDAC6-201ENST00000334136 CFHR4Q92496 578 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 DLX4Q92988 240 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-201ENST00000334136 TMEM238C9JI98 176 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 H7C1H1 209 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 TSPAN13O95857 204 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 LTAP01374 205 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 NPC2P61916 151 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 ZNF503Q96F45 646 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 PRR25Q96S07 402 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 VCX2Q9H322 139 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 P0C879 139 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 HLA-DMBP28068 263 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 C2orf70A6NJV1 201 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 PLNP26678 52 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 FLNAP21333 2647 aaKnown RBP9.16□□□□□ -0.94
HDAC6-201ENST00000334136 IGLV2-23P01705 113 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 GATA1P15976 413 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-201ENST00000334136 SH2D6Q7Z4S9 175 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 BAHCC1Q9P281 2608 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 PRSS46E5RG02 174 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 IGHG2P01859 326 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 VGLL1Q99990 258 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 CSTL1Q9H114 145 aa9.16□□□□□ -0.94
HDAC6-201ENST00000334136 LINC01549A6NIU2 74 aa9.15□□□□□ -0.94
HDAC6-201ENST00000334136 SYNJ2BPP57105 145 aa9.15□□□□□ -0.94
HDAC6-201ENST00000334136 SNRPD3P62318 126 aaKnown RBP9.15□□□□□ -0.94
HDAC6-201ENST00000334136 CIRBPQ14011 172 aaKnown RBP9.15□□□□□ -0.94
HDAC6-201ENST00000334136 PAPPA-AS1Q5QFB9 102 aa9.15□□□□□ -0.94
HDAC6-201ENST00000334136 SPRY2O43597 315 aa9.15□□□□□ -0.94
HDAC6-201ENST00000334136 GAGE2BQ13066 116 aa9.15□□□□□ -0.94
HDAC6-201ENST00000334136 GAGE2EQ4V326 116 aa9.15□□□□□ -0.94
HDAC6-201ENST00000334136 GDF5OSQ5U4N7 250 aa9.15□□□□□ -0.94
HDAC6-201ENST00000334136 GAGE2DQ9UEU5 116 aa9.15□□□□□ -0.94
HDAC6-201ENST00000334136 GAGE12HA6NDE8 117 aa9.15□□□□□ -0.95
HDAC6-201ENST00000334136 FCN3O75636 299 aa9.15□□□□□ -0.95
HDAC6-201ENST00000334136 THAP8Q8NA92 274 aa9.15□□□□□ -0.95
HDAC6-201ENST00000334136 MSRB1Q9NZV6 116 aa9.15□□□□□ -0.95
HDAC6-201ENST00000334136 KALRNO60229 2985 aa9.14□□□□□ -0.95
HDAC6-201ENST00000334136 ERG28Q9UKR5 140 aa9.14□□□□□ -0.95
HDAC6-201ENST00000334136 RNASE1P07998 156 aaKnown RBP9.14□□□□□ -0.95
HDAC6-201ENST00000334136 SIGLEC15Q6ZMC9 328 aa9.14□□□□□ -0.95
HDAC6-201ENST00000334136 SCRT2Q9NQ03 307 aa9.14□□□□□ -0.95
HDAC6-201ENST00000334136 TNFRSF18Q9Y5U5 241 aa9.14□□□□□ -0.95
HDAC6-201ENST00000334136 H3BUA1 57 aa9.14□□□□□ -0.95
HDAC6-201ENST00000334136 PDE6HQ13956 83 aa9.14□□□□□ -0.95
HDAC6-201ENST00000334136 A0A087WWL8 130 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 EBI3Q14213 229 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 LINC01545Q5VT33 79 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 LINC00322Q6ZN03 302 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-201ENST00000334136 MAP1AP78559 2803 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-201ENST00000334136 CLPSL1A2RUU4 121 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 IGLV2-8P01709 118 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 NEGR1Q7Z3B1 354 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 C10orf126Q8N4M7 172 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 ZNF491Q8N8L2 437 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 C9JAW5 83 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 EGR2P11161 476 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-201ENST00000334136 C19orf54Q5BKX5 351 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 ZFAND6Q6FIF0 208 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 UNC79Q9P2D8 2635 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 LINC01619G3V211 115 aa9.13□□□□□ -0.95
HDAC6-201ENST00000334136 TMEM262E9PQX1 116 aa9.12□□□□□ -0.95
HDAC6-201ENST00000334136 FOXE3Q13461 319 aa9.12□□□□□ -0.95
HDAC6-201ENST00000334136 SCGB1A1P11684 91 aa9.12□□□□□ -0.95
HDAC6-201ENST00000334136 C2orf66Q6UXQ4 117 aa9.12□□□□□ -0.95
HDAC6-201ENST00000334136 IGHV3-73A0A0B4J1V6 119 aa9.12□□□□□ -0.95
HDAC6-201ENST00000334136 GP9P14770 177 aa9.12□□□□□ -0.95
HDAC6-201ENST00000334136 FXYD2P54710 66 aa9.12□□□□□ -0.95
HDAC6-201ENST00000334136 LINC01559Q495D7 138 aa9.12□□□□□ -0.95
HDAC6-201ENST00000334136 DPH3P1Q9H4G8 78 aa9.12□□□□□ -0.95
HDAC6-201ENST00000334136 ATMQ13315 3056 aa9.12□□□□□ -0.95
HDAC6-201ENST00000334136 TRBV25-1A0A075B6N4 114 aa9.11□□□□□ -0.95
HDAC6-201ENST00000334136 CTRLP40313 264 aa9.11□□□□□ -0.95
HDAC6-201ENST00000334136 AJUBAQ96IF1 538 aa9.11□□□□□ -0.95
HDAC6-201ENST00000334136 DAZ1Q9NQZ3 744 aaKnown RBP9.11□□□□□ -0.95
HDAC6-201ENST00000334136 LOC400499M0QZD8 3231 aa9.11□□□□□ -0.95
HDAC6-201ENST00000334136 LINC01548A6NM66 108 aa9.11□□□□□ -0.95
HDAC6-201ENST00000334136 H3BRN7 92 aa9.11□□□□□ -0.95
HDAC6-201ENST00000334136 IGKV1-17P01599 117 aa9.11□□□□□ -0.95
HDAC6-201ENST00000334136 WFDC2Q14508 124 aa9.11□□□□□ -0.95
HDAC6-201ENST00000334136 ZNF688P0C7X2 276 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 LINC00310P59036 64 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 RBX1P62877 108 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 PRADC1Q9BSG0 188 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 RHPN1-AS1Q9BWJ2 59 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 TMEM14CQ9P0S9 112 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 TOMM7Q9P0U1 55 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 EIF4EBP1Q13541 118 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-201ENST00000334136 CEND1Q8N111 149 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 OR13C6PQ8NH95 151 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 F8W1H4 67 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 DNAL4O96015 105 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 HILS1P60008 231 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 SRSF2Q01130 221 aaKnown RBP9.1□□□□□ -0.95
HDAC6-201ENST00000334136 ZNF876PQ49A33 203 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 Q8N8P6 123 aa9.1□□□□□ -0.95
HDAC6-201ENST00000334136 DUX3Q96PT4 197 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 471.3 ms