RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 DLX4Q92988 240 aaPredicted RBP8.64□□□□□ -1.03
POLR1B-202ENST00000333990 NOP10Q9NPE3 64 aaKnown RBP8.64□□□□□ -1.03
POLR1B-202ENST00000333990 MRPL16Q9NX20 251 aaKnown RBP8.64□□□□□ -1.03
POLR1B-202ENST00000333990 CBY1Q9Y3M2 126 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 EGR2P11161 476 aaPredicted RBP8.64□□□□□ -1.03
POLR1B-202ENST00000333990 LINC00158P58513 81 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 PLXNB1O43157 2135 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 CCDC140Q96MF4 163 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 PKD1L2Q7Z442 2459 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 LOC105371267A0A1B0GV96 52 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 HILS1P60008 231 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 KLF5Q13887 457 aaPredicted RBP8.63□□□□□ -1.03
POLR1B-202ENST00000333990 UTF1Q5T230 341 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 SH2D6Q7Z4S9 175 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 SMIM2Q9BVW6 85 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 LINC01548A6NM66 108 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 SLC25A20O43772 301 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 ATP5G1P05496 136 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 MORN5Q5VZ52 161 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 UNQ9165/PRO28630Q6UXU0 137 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 C18orf32Q8TCD1 76 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 TP53TG1Q9Y2A0 90 aa8.63□□□□□ -1.03
POLR1B-202ENST00000333990 SNAI2O43623 268 aa8.62□□□□□ -1.03
POLR1B-202ENST00000333990 CTAG1AP78358 180 aa8.62□□□□□ -1.03
POLR1B-202ENST00000333990 PSMG3-AS1Q96PY0 264 aa8.62□□□□□ -1.03
POLR1B-202ENST00000333990 C11orf1Q9H5F2 150 aa8.62□□□□□ -1.03
POLR1B-202ENST00000333990 GNRH2O43555 120 aa8.62□□□□□ -1.03
POLR1B-202ENST00000333990 PAX2Q02962 417 aa8.62□□□□□ -1.03
POLR1B-202ENST00000333990 C10orf91Q5T1B1 145 aa8.62□□□□□ -1.03
POLR1B-202ENST00000333990 MYMXA0A1B0GTQ4 84 aa8.61□□□□□ -1.03
POLR1B-202ENST00000333990 SYS1-DBNDD2H3BUS1 97 aa8.61□□□□□ -1.03
POLR1B-202ENST00000333990 K7EMI3 77 aa8.61□□□□□ -1.03
POLR1B-202ENST00000333990 TRBV12-3P01733 135 aa8.61□□□□□ -1.03
POLR1B-202ENST00000333990 IGLC2P0DOY2 106 aa8.61□□□□□ -1.03
POLR1B-202ENST00000333990 PRR31Q5SQ13 230 aa8.61□□□□□ -1.03
POLR1B-202ENST00000333990 Q8N6K4 173 aa8.61□□□□□ -1.03
POLR1B-202ENST00000333990 ARHGAP32A7KAX9 2087 aa8.61□□□□□ -1.03
POLR1B-202ENST00000333990 ZC2HC1BQ5TFG8 222 aa8.61□□□□□ -1.03
POLR1B-202ENST00000333990 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
POLR1B-202ENST00000333990 IGKV1D-37A0A075B6S9 117 aa8.6□□□□□ -1.03
POLR1B-202ENST00000333990 C1orf229Q6ZS94 237 aaPredicted RBP8.6□□□□□ -1.03
POLR1B-202ENST00000333990 DEFB104AQ8WTQ1 72 aa8.6□□□□□ -1.03
POLR1B-202ENST00000333990 TRAV2A0A0B4J234 112 aa8.6□□□□□ -1.03
POLR1B-202ENST00000333990 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
POLR1B-202ENST00000333990 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
POLR1B-202ENST00000333990 BBC3Q96PG8 261 aaPredicted RBP8.6□□□□□ -1.03
POLR1B-202ENST00000333990 KLF12Q9Y4X4 402 aa8.6□□□□□ -1.03
POLR1B-202ENST00000333990 ATG2AQ2TAZ0 1938 aa8.6□□□□□ -1.03
POLR1B-202ENST00000333990 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
POLR1B-202ENST00000333990 A0A0J9YX75 114 aa8.6□□□□□ -1.03
POLR1B-202ENST00000333990 PMVKQ15126 192 aa8.6□□□□□ -1.03
POLR1B-202ENST00000333990 MRPL23Q16540 153 aaKnown RBP8.6□□□□□ -1.03
POLR1B-202ENST00000333990 TRBV6-1A0A0K0K1D8 114 aa8.59□□□□□ -1.03
POLR1B-202ENST00000333990 DNAJC30Q96LL9 226 aa8.59□□□□□ -1.03
POLR1B-202ENST00000333990 KRTAP10-9P60411 292 aa8.59□□□□□ -1.03
POLR1B-202ENST00000333990 PRIMA1Q86XR5 153 aa8.59□□□□□ -1.03
POLR1B-202ENST00000333990 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
POLR1B-202ENST00000333990 K7ERU9 68 aa8.59□□□□□ -1.03
POLR1B-202ENST00000333990 MED14OSP0DP75 135 aa8.59□□□□□ -1.03
POLR1B-202ENST00000333990 HLA-DRB4P13762 266 aa8.59□□□□□ -1.03
POLR1B-202ENST00000333990 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
POLR1B-202ENST00000333990 HLA-DRB4X5D2U9 266 aa8.59□□□□□ -1.03
POLR1B-202ENST00000333990 VWC2LB2RUY7 222 aa8.59□□□□□ -1.04
POLR1B-202ENST00000333990 EREGO14944 169 aa8.59□□□□□ -1.04
POLR1B-202ENST00000333990 EXPH5Q8NEV8 1989 aa8.58□□□□□ -1.04
POLR1B-202ENST00000333990 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.58□□□□□ -1.04
POLR1B-202ENST00000333990 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
POLR1B-202ENST00000333990 K7EN84 100 aa8.58□□□□□ -1.04
POLR1B-202ENST00000333990 GAGE6Q13070 117 aa8.58□□□□□ -1.04
POLR1B-202ENST00000333990 A0A1W2PPR1 153 aa8.58□□□□□ -1.04
POLR1B-202ENST00000333990 ZNF295-AS1Q8N0V1 137 aa8.58□□□□□ -1.04
POLR1B-202ENST00000333990 LINC01006Q8NI28 216 aa8.58□□□□□ -1.04
POLR1B-202ENST00000333990 JPT2Q9H910 190 aa8.58□□□□□ -1.04
POLR1B-202ENST00000333990 HSD52Q0P140 79 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 CHAC1Q9BUX1 264 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 DOPEY1Q5JWR5 2465 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 IGHV3-38A0A0C4DH36 116 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 NPYP01303 97 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 ZNF702PQ9H963 129 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 MAP6D1Q9H9H5 199 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 NACAE9PAV3 2078 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 PRAC2D3DTV9 90 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 ADAMTSL5Q6ZMM2 481 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 FN1P02751 2386 aaKnown RBP8.57□□□□□ -1.04
POLR1B-202ENST00000333990 TRAV26-2A0A0B4J265 109 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 K7EQG2 157 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 ANGP03950 147 aaKnown RBP8.57□□□□□ -1.04
POLR1B-202ENST00000333990 CCL18P55774 89 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 DEFB114Q30KQ6 69 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
POLR1B-202ENST00000333990 PSMB8P28062 276 aa8.56□□□□□ -1.04
POLR1B-202ENST00000333990 IL17DQ8TAD2 202 aa8.56□□□□□ -1.04
POLR1B-202ENST00000333990 ODF3Q96PU9 254 aa8.56□□□□□ -1.04
POLR1B-202ENST00000333990 SIGLEC8Q9NYZ4 499 aa8.56□□□□□ -1.04
POLR1B-202ENST00000333990 DEFB135Q30KP9 77 aa8.56□□□□□ -1.04
POLR1B-202ENST00000333990 NHP2Q9NX24 153 aaKnown RBP8.56□□□□□ -1.04
POLR1B-202ENST00000333990 C11orf68Q9H3H3 251 aaKnown RBP8.56□□□□□ -1.04
POLR1B-202ENST00000333990 Q8N1Y9 231 aa8.55□□□□□ -1.04
POLR1B-202ENST00000333990 HCFC1P51610 2035 aa8.55□□□□□ -1.04
POLR1B-202ENST00000333990 A0A0J9YY99 117 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms