RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 F8W735 103 aaPredicted RBP13.92□□□□□ -0.18
SOCS3-201ENST00000330871 EIF4EBP3O60516 100 aaPredicted RBP13.92□□□□□ -0.18
SOCS3-201ENST00000330871 BEX4Q9NWD9 120 aaPredicted RBP13.92□□□□□ -0.18
SOCS3-201ENST00000330871 IGHV3-66A0A0C4DH42 116 aa13.92□□□□□ -0.18
SOCS3-201ENST00000330871 DCHS2Q6V1P9 2916 aa13.92□□□□□ -0.18
SOCS3-201ENST00000330871 RAB1BQ9H0U4 201 aa13.92□□□□□ -0.18
SOCS3-201ENST00000330871 VPREB3Q9UKI3 123 aa13.92□□□□□ -0.18
SOCS3-201ENST00000330871 CRYGDP07320 174 aa13.92□□□□□ -0.18
SOCS3-201ENST00000330871 A4D1N5 150 aa13.91□□□□□ -0.18
SOCS3-201ENST00000330871 DUSP14O95147 198 aaKnown RBP13.91□□□□□ -0.18
SOCS3-201ENST00000330871 MFAP4P55083 255 aa13.91□□□□□ -0.18
SOCS3-201ENST00000330871 Q6Q795 121 aa13.91□□□□□ -0.18
SOCS3-201ENST00000330871 CACNA1BQ00975 2339 aa13.91□□□□□ -0.18
SOCS3-201ENST00000330871 TCF15Q12870 199 aa13.91□□□□□ -0.18
SOCS3-201ENST00000330871 C14orf178Q8N769 122 aaPredicted RBP13.91□□□□□ -0.18
SOCS3-201ENST00000330871 AGPAT4-IT1Q9H0P7 198 aa13.91□□□□□ -0.18
SOCS3-201ENST00000330871 IGHV3OR16-13A0A075B7E8 117 aa13.9□□□□□ -0.18
SOCS3-201ENST00000330871 IGHV3-74A0A0B4J1X5 117 aa13.9□□□□□ -0.18
SOCS3-201ENST00000330871 J3KRW8 73 aa13.9□□□□□ -0.18
SOCS3-201ENST00000330871 M0R381 172 aa13.9□□□□□ -0.18
SOCS3-201ENST00000330871 YAE1D1Q9NRH1 226 aa13.9□□□□□ -0.18
SOCS3-201ENST00000330871 SLC25A29Q8N8R3 303 aa13.9□□□□□ -0.18
SOCS3-201ENST00000330871 OR10J6PQ8NGY7 276 aa13.9□□□□□ -0.18
SOCS3-201ENST00000330871 FANCD2OSQ96PS1 177 aa13.9□□□□□ -0.18
SOCS3-201ENST00000330871 PIEZO2Q9H5I5 2752 aa13.89□□□□□ -0.19
SOCS3-201ENST00000330871 Q1RN00 199 aa13.89□□□□□ -0.19
SOCS3-201ENST00000330871 TIMD4Q96H15 378 aa13.89□□□□□ -0.19
SOCS3-201ENST00000330871 IGLV4-69A0A075B6H9 119 aa13.89□□□□□ -0.19
SOCS3-201ENST00000330871 TRAV2A0A0B4J234 112 aa13.89□□□□□ -0.19
SOCS3-201ENST00000330871 IGHV3-33P01772 117 aa13.89□□□□□ -0.19
SOCS3-201ENST00000330871 MSRB2Q9Y3D2 182 aa13.89□□□□□ -0.19
SOCS3-201ENST00000330871 CNOT1A5YKK6 2376 aaKnown RBP13.89□□□□□ -0.19
SOCS3-201ENST00000330871 TMEM170BQ5T4T1 132 aa13.88□□□□□ -0.19
SOCS3-201ENST00000330871 IGF2-ASQ6U949 168 aa13.88□□□□□ -0.19
SOCS3-201ENST00000330871 C21orf62Q9NYP8 219 aa13.88□□□□□ -0.19
SOCS3-201ENST00000330871 BDP1A6H8Y1 2624 aa13.88□□□□□ -0.19
SOCS3-201ENST00000330871 FOXC1Q12948 553 aa13.88□□□□□ -0.19
SOCS3-201ENST00000330871 LINC01620Q4KN68 170 aa13.88□□□□□ -0.19
SOCS3-201ENST00000330871 E7EQL1 145 aa13.87□□□□□ -0.19
SOCS3-201ENST00000330871 LY6LH3BQJ8 138 aa13.87□□□□□ -0.19
SOCS3-201ENST00000330871 MGPP08493 103 aa13.87□□□□□ -0.19
SOCS3-201ENST00000330871 HERVK_113P61574 105 aa13.87□□□□□ -0.19
SOCS3-201ENST00000330871 SLC50A1Q9BRV3 221 aa13.87□□□□□ -0.19
SOCS3-201ENST00000330871 EP300Q09472 2414 aaPredicted RBP13.87□□□□□ -0.19
SOCS3-201ENST00000330871 M0QXV9 152 aa13.87□□□□□ -0.19
SOCS3-201ENST00000330871 MDFICQ9P1T7 246 aa13.87□□□□□ -0.19
SOCS3-201ENST00000330871 TIMM23O14925 209 aa13.86□□□□□ -0.19
SOCS3-201ENST00000330871 ARHGAP32A7KAX9 2087 aa13.86□□□□□ -0.19
SOCS3-201ENST00000330871 TSHBP01222 138 aa13.86□□□□□ -0.19
SOCS3-201ENST00000330871 CUL9Q8IWT3 2517 aa13.85□□□□□ -0.19
SOCS3-201ENST00000330871 ZNF56Q15929 161 aa13.85□□□□□ -0.19
SOCS3-201ENST00000330871 PRR30Q53SZ7 412 aaPredicted RBP13.85□□□□□ -0.19
SOCS3-201ENST00000330871 IGLV11-55A0A075B6I3 123 aa13.85□□□□□ -0.19
SOCS3-201ENST00000330871 RNF223E7ERA6 249 aa13.85□□□□□ -0.19
SOCS3-201ENST00000330871 NBR2O15453 112 aa13.85□□□□□ -0.19
SOCS3-201ENST00000330871 TMEM263Q8WUH6 116 aaKnown RBP13.85□□□□□ -0.19
SOCS3-201ENST00000330871 IGHV3-49A0A0A0MS15 119 aa13.84□□□□□ -0.19
SOCS3-201ENST00000330871 H3BMM0 161 aa13.84□□□□□ -0.19
SOCS3-201ENST00000330871 UBE2WQ96B02 151 aa13.84□□□□□ -0.19
SOCS3-201ENST00000330871 CTSGP08311 255 aa13.84□□□□□ -0.19
SOCS3-201ENST00000330871 ATXN8Q156A1 80 aa13.84□□□□□ -0.19
SOCS3-201ENST00000330871 LGALS9O00182 355 aa13.83□□□□□ -0.2
SOCS3-201ENST00000330871 LINC01587Q99440 93 aa13.83□□□□□ -0.2
SOCS3-201ENST00000330871 TP53TG1Q9Y2A0 90 aa13.83□□□□□ -0.2
SOCS3-201ENST00000330871 LYNX1G3V0Z9 82 aa13.83□□□□□ -0.2
SOCS3-201ENST00000330871 LYNX1P0DP58 116 aa13.83□□□□□ -0.2
SOCS3-201ENST00000330871 RPL39P62891 51 aaKnown RBP13.83□□□□□ -0.2
SOCS3-201ENST00000330871 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.83□□□□□ -0.2
SOCS3-201ENST00000330871 AMELXQ99217 191 aa13.83□□□□□ -0.2
SOCS3-201ENST00000330871 IGHV3-64A0A075B6Q5 118 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 IGHV4-4A0A075B6R2 117 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 B9A039 149 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 IGF1P05019 195 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 PRR9Q5T870 116 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 MUSTN1Q8IVN3 82 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 ZNRF2Q8NHG8 242 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 DUX3Q96PT4 197 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 SPTBN2O15020 2390 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 J3QQQ9 107 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 HES1Q14469 280 aa13.82□□□□□ -0.2
SOCS3-201ENST00000330871 LGALS3P17931 250 aaKnown RBP13.81□□□□□ -0.2
SOCS3-201ENST00000330871 RPL13AP40429 203 aaKnown RBP13.81□□□□□ -0.2
SOCS3-201ENST00000330871 NPBQ8NG41 125 aa13.81□□□□□ -0.2
SOCS3-201ENST00000330871 NDPQ00604 133 aa13.81□□□□□ -0.2
SOCS3-201ENST00000330871 DPM3Q9P2X0 92 aa13.81□□□□□ -0.2
SOCS3-201ENST00000330871 MED13LQ71F56 2210 aa13.81□□□□□ -0.2
SOCS3-201ENST00000330871 TRBV10-2A0A0K0K1G8 114 aa13.8□□□□□ -0.2
SOCS3-201ENST00000330871 P0DMU3 169 aa13.8□□□□□ -0.2
SOCS3-201ENST00000330871 FAM231AP0DMU4 169 aa13.8□□□□□ -0.2
SOCS3-201ENST00000330871 FAM231CP0DMU5 169 aa13.8□□□□□ -0.2
SOCS3-201ENST00000330871 ATP5J2P56134 94 aa13.8□□□□□ -0.2
SOCS3-201ENST00000330871 C2orf82Q6UX34 121 aa13.8□□□□□ -0.2
SOCS3-201ENST00000330871 CACNA1HO95180 2353 aa13.8□□□□□ -0.2
SOCS3-201ENST00000330871 ZFHX3Q15911 3703 aa13.79□□□□□ -0.2
SOCS3-201ENST00000330871 TRIAP1O43715 76 aa13.79□□□□□ -0.2
SOCS3-201ENST00000330871 LINC00694P0DN24 101 aa13.79□□□□□ -0.2
SOCS3-201ENST00000330871 PMVKQ15126 192 aa13.79□□□□□ -0.2
SOCS3-201ENST00000330871 DPH3P1Q9H4G8 78 aa13.79□□□□□ -0.2
SOCS3-201ENST00000330871 RBAKDNA6NC62 111 aa13.78□□□□□ -0.2
SOCS3-201ENST00000330871 S100A4P26447 101 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms