RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 NRACQ8N912 160 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 PLEKHB2Q96CS7 222 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.05□□□□□ -1.444e-14■■■■■ 27.9
VMA21-201ENST00000330374 LY6LH3BQJ8 138 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 SPINK8P0C7L1 97 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 PRADC1Q9BSG0 188 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 GEMIN7Q9H840 131 aaKnown RBP6.05□□□□□ -1.44
VMA21-201ENST00000330374 LINC00527Q9UJ94 153 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 H7C1H1 209 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 H7C2G1 150 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 ZNF672Q499Z4 452 aaPredicted RBP6.05□□□□□ -1.44
VMA21-201ENST00000330374 Q8N1Y9 231 aa6.05□□□□□ -1.44
VMA21-201ENST00000330374 TRBV7-3A0A075B6L6 115 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 F8VRH5 84 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 G3V318 75 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 LGALS1P09382 135 aaKnown RBP6.04□□□□□ -1.44
VMA21-201ENST00000330374 PLNP26678 52 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 MORN3Q6PF18 240 aaPredicted RBP6.04□□□□□ -1.44
VMA21-201ENST00000330374 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 PIFOQ8TCI5 191 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 SCGB1C2P0DMR2 95 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 CRYBA4P53673 196 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 FOXI1Q12951 378 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 NFE4Q86UQ8 179 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 PRO0461Q9UI25 63 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 ZNF292O60281 2723 aa6.04□□□□□ -1.44
VMA21-201ENST00000330374 SPG11Q96JI7 2443 aa6.03□□□□□ -1.44
VMA21-201ENST00000330374 IGLV1-40P01703 118 aa6.03□□□□□ -1.44
VMA21-201ENST00000330374 RNF5Q99942 180 aa6.03□□□□□ -1.44
VMA21-201ENST00000330374 SMIM2Q9BVW6 85 aa6.03□□□□□ -1.44
VMA21-201ENST00000330374 PRR9Q5T870 116 aa6.03□□□□□ -1.44
VMA21-201ENST00000330374 IGHV7-4-1A0A0J9YVY3 117 aa6.03□□□□□ -1.44
VMA21-201ENST00000330374 SCGB1A1P11684 91 aa6.03□□□□□ -1.44
VMA21-201ENST00000330374 SMCPP49901 116 aaPredicted RBP6.03□□□□□ -1.44
VMA21-201ENST00000330374 CNFNQ9BYD5 112 aa6.03□□□□□ -1.44
VMA21-201ENST00000330374 BUB3O43684 328 aa6.03□□□□□ -1.44
VMA21-201ENST00000330374 C2orf66Q6UXQ4 117 aa6.03□□□□□ -1.44
VMA21-201ENST00000330374 DLX4Q92988 240 aaPredicted RBP6.03□□□□□ -1.44
VMA21-201ENST00000330374 KIR2DL4Q99706 377 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 FHL3Q13643 280 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 TAL2Q16559 108 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 PHLDA3Q9Y5J5 127 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 IGF2RP11717 2491 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 IGHV7-81A0A0B4J1V7 117 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 PSMG4Q5JS54 123 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 IGFL3Q6UXB1 125 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 VMO1Q7Z5L0 202 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 NPBQ8NG41 125 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 MRAP2Q96G30 205 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 C1QTNF4Q9BXJ3 329 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 PTPRQQ9UMZ3 2332 aa6.02□□□□□ -1.45
VMA21-201ENST00000330374 IGHV3-64A0A075B6Q5 118 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 TSPAN13O95857 204 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 XGP55808 180 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 COX8CQ7Z4L0 72 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 DOPEY2Q9Y3R5 2298 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 HRNRQ86YZ3 2850 aaPredicted RBP6.01□□□□□ -1.45
VMA21-201ENST00000330374 ATP6V0E1O15342 81 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 DUSP14O95147 198 aaKnown RBP6.01□□□□□ -1.45
VMA21-201ENST00000330374 TMEM170BQ5T4T1 132 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 BAALCQ8WXS3 180 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 NOTCH3Q9UM47 2321 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 TRAV8-2A0A0B4J237 113 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 F6UB75 175 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 GATA3P23771 443 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 LINC01546A6NGU7 62 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 CFAP126Q5VTH2 177 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 RASL10AQ92737 203 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 U3KQE9 123 aa6.01□□□□□ -1.45
VMA21-201ENST00000330374 GNRH2O43555 120 aa6□□□□□ -1.45
VMA21-201ENST00000330374 PRTN3P24158 256 aa6□□□□□ -1.45
VMA21-201ENST00000330374 RNASE4P34096 147 aaKnown RBP6□□□□□ -1.45
VMA21-201ENST00000330374 SEC61GP60059 68 aa6□□□□□ -1.45
VMA21-201ENST00000330374 METTL26Q96S19 204 aa6□□□□□ -1.45
VMA21-201ENST00000330374 IGHV3OR16-10A0A075B7F0 116 aa6□□□□□ -1.45
VMA21-201ENST00000330374 PIP4P1Q86T03 277 aa6□□□□□ -1.45
VMA21-201ENST00000330374 PLA2G2DQ9UNK4 145 aa6□□□□□ -1.45
VMA21-201ENST00000330374 SRD5A1P18405 259 aa6□□□□□ -1.45
VMA21-201ENST00000330374 RPL39P62891 51 aaKnown RBP6□□□□□ -1.45
VMA21-201ENST00000330374 ORMDL2Q53FV1 153 aa6□□□□□ -1.45
VMA21-201ENST00000330374 Q6ZS46 218 aa6□□□□□ -1.45
VMA21-201ENST00000330374 NEXN-AS1Q8NBZ9 246 aa6□□□□□ -1.45
VMA21-201ENST00000330374 TCL1BO95988 128 aa6□□□□□ -1.45
VMA21-201ENST00000330374 TMEM219Q86XT9 240 aa6□□□□□ -1.45
VMA21-201ENST00000330374 SLC50A1Q9BRV3 221 aa6□□□□□ -1.45
VMA21-201ENST00000330374 JPT2Q9H910 190 aa6□□□□□ -1.45
VMA21-201ENST00000330374 TMEM89A2RUT3 159 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 CLPSL1A2RUU4 121 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 C11orf86A6NJI1 115 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 Q6ZUT4 128 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 OR11H6Q8NGC7 330 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 F8WDY8 70 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 C20orf173Q96LM9 149 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 CSPG4Q6UVK1 2322 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 TOMM6Q96B49 74 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 CARD19Q96LW7 228 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms