RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 IFNA1P01562 189 aa19.02■□□□□ 0.64
ATPAF1-201ENST00000329231 PTH2Q96A98 100 aa19.02■□□□□ 0.64
ATPAF1-201ENST00000329231 HECTD4Q9Y4D8 3996 aa19.01■□□□□ 0.63
ATPAF1-201ENST00000329231 IGKV3D-20A0A0C4DH25 116 aa19.01■□□□□ 0.63
ATPAF1-201ENST00000329231 K7EQD1 137 aa19.01■□□□□ 0.63
ATPAF1-201ENST00000329231 RNASE3P12724 160 aaKnown RBP19.01■□□□□ 0.63
ATPAF1-201ENST00000329231 GYPEP15421 78 aa19.01■□□□□ 0.63
ATPAF1-201ENST00000329231 SRIP30626 198 aa19.01■□□□□ 0.63
ATPAF1-201ENST00000329231 ZC2HC1AQ96GY0 325 aa19.01■□□□□ 0.63
ATPAF1-201ENST00000329231 A0A1W2PPQ1 181 aa19■□□□□ 0.63
ATPAF1-201ENST00000329231 CIDEAO60543 219 aa19■□□□□ 0.63
ATPAF1-201ENST00000329231 S100A4P26447 101 aaKnown RBP19■□□□□ 0.63
ATPAF1-201ENST00000329231 BLOC1S1P78537 153 aa19■□□□□ 0.63
ATPAF1-201ENST00000329231 FAT2Q9NYQ8 4349 aa19■□□□□ 0.63
ATPAF1-201ENST00000329231 ASIPP42127 132 aa18.99■□□□□ 0.63
ATPAF1-201ENST00000329231 FAM162BQ5T6X4 162 aa18.99■□□□□ 0.63
ATPAF1-201ENST00000329231 LYPD5Q6UWN5 251 aa18.99■□□□□ 0.63
ATPAF1-201ENST00000329231 DNAH17Q9UFH2 4485 aa18.99■□□□□ 0.63
ATPAF1-201ENST00000329231 B4DEV8 164 aa18.98■□□□□ 0.63
ATPAF1-201ENST00000329231 RS1O15537 224 aa18.98■□□□□ 0.63
ATPAF1-201ENST00000329231 GATA1P15976 413 aaPredicted RBP18.98■□□□□ 0.63
ATPAF1-201ENST00000329231 CRIP1P50238 77 aa18.98■□□□□ 0.63
ATPAF1-201ENST00000329231 MEF2BQ02080 365 aaPredicted RBP18.98■□□□□ 0.63
ATPAF1-201ENST00000329231 ZNF506Q5JVG8 444 aa18.98■□□□□ 0.63
ATPAF1-201ENST00000329231 CFAP126Q5VTH2 177 aa18.98■□□□□ 0.63
ATPAF1-201ENST00000329231 C11orf52Q96A22 123 aa18.98■□□□□ 0.63
ATPAF1-201ENST00000329231 PGPEP1LA6NFU8 196 aa18.97■□□□□ 0.63
ATPAF1-201ENST00000329231 SIVA1O15304 175 aa18.97■□□□□ 0.63
ATPAF1-201ENST00000329231 NXPH4O95158 308 aa18.97■□□□□ 0.63
ATPAF1-201ENST00000329231 BCL2P10415 239 aa18.97■□□□□ 0.63
ATPAF1-201ENST00000329231 SH2D1AO60880 128 aa18.96■□□□□ 0.63
ATPAF1-201ENST00000329231 TAGLN2P37802 199 aaKnown RBP18.96■□□□□ 0.63
ATPAF1-201ENST00000329231 KRTAP1-5Q9BYS1 174 aa18.96■□□□□ 0.63
ATPAF1-201ENST00000329231 ZNF674Q2M3X9 581 aa18.95■□□□□ 0.62
ATPAF1-201ENST00000329231 SH2D6Q7Z4S9 175 aa18.95■□□□□ 0.62
ATPAF1-201ENST00000329231 IL36BQ9NZH7 164 aa18.95■□□□□ 0.62
ATPAF1-201ENST00000329231 VAX2Q9UIW0 290 aa18.95■□□□□ 0.62
ATPAF1-201ENST00000329231 KRBOX1C9JBD0 128 aa18.94■□□□□ 0.62
ATPAF1-201ENST00000329231 PDE6DO43924 150 aa18.94■□□□□ 0.62
ATPAF1-201ENST00000329231 BTF3P20290 206 aaKnown RBP18.94■□□□□ 0.62
ATPAF1-201ENST00000329231 RPL35P42766 123 aaKnown RBP18.94■□□□□ 0.62
ATPAF1-201ENST00000329231 PIK3CD-AS1Q5SR53 167 aa18.94■□□□□ 0.62
ATPAF1-201ENST00000329231 BAGE2Q86Y30 109 aa18.94■□□□□ 0.62
ATPAF1-201ENST00000329231 NHLRC2Q8NBF2 726 aa18.94■□□□□ 0.62
ATPAF1-201ENST00000329231 M0R036 132 aa18.93■□□□□ 0.62
ATPAF1-201ENST00000329231 DNLZQ5SXM8 178 aa18.93■□□□□ 0.62
ATPAF1-201ENST00000329231 LYPD6BQ8NI32 183 aa18.92■□□□□ 0.62
ATPAF1-201ENST00000329231 PRADC1Q9BSG0 188 aa18.92■□□□□ 0.62
ATPAF1-201ENST00000329231 MLST8Q9BVC4 326 aa18.92■□□□□ 0.62
ATPAF1-201ENST00000329231 IGHV3-73A0A0B4J1V6 119 aa18.91■□□□□ 0.62
ATPAF1-201ENST00000329231 LOC100131303A0A0U1RQF7 123 aa18.91■□□□□ 0.62
ATPAF1-201ENST00000329231 TRBV6-4A0A1B0GX49 114 aa18.91■□□□□ 0.62
ATPAF1-201ENST00000329231 A8MWV9 139 aa18.91■□□□□ 0.62
ATPAF1-201ENST00000329231 TNP2Q05952 138 aa18.91■□□□□ 0.62
ATPAF1-201ENST00000329231 SLC25A29Q8N8R3 303 aa18.91■□□□□ 0.62
ATPAF1-201ENST00000329231 DERL1Q9BUN8 251 aa18.91■□□□□ 0.62
ATPAF1-201ENST00000329231 H3BVH4 76 aa18.9■□□□□ 0.62
ATPAF1-201ENST00000329231 RHOHQ15669 191 aa18.9■□□□□ 0.62
ATPAF1-201ENST00000329231 LINC01559Q495D7 138 aa18.9■□□□□ 0.62
ATPAF1-201ENST00000329231 ARMS2P0C7Q2 107 aa18.89■□□□□ 0.61
ATPAF1-201ENST00000329231 MGST1P10620 155 aaKnown RBP18.89■□□□□ 0.61
ATPAF1-201ENST00000329231 SYT8Q8NBV8 401 aa18.89■□□□□ 0.61
ATPAF1-201ENST00000329231 MED9Q9NWA0 146 aa18.89■□□□□ 0.61
ATPAF1-201ENST00000329231 GRIFINA4D1Z8 144 aa18.88■□□□□ 0.61
ATPAF1-201ENST00000329231 ZFP2Q6ZN57 461 aa18.88■□□□□ 0.61
ATPAF1-201ENST00000329231 PARLQ9H300 379 aa18.88■□□□□ 0.61
ATPAF1-201ENST00000329231 TMSB15BA0A087X1C1 80 aa18.86■□□□□ 0.61
ATPAF1-201ENST00000329231 TIRAPP58753 221 aa18.86■□□□□ 0.61
ATPAF1-201ENST00000329231 CENPWQ5EE01 88 aa18.86■□□□□ 0.61
ATPAF1-201ENST00000329231 PHLDA3Q9Y5J5 127 aa18.86■□□□□ 0.61
ATPAF1-201ENST00000329231 LY96Q9Y6Y9 160 aa18.86■□□□□ 0.61
ATPAF1-201ENST00000329231 TRAV9-2A0A087WT02 112 aa18.85■□□□□ 0.61
ATPAF1-201ENST00000329231 RBFOX3A6NFN3 312 aa18.85■□□□□ 0.61
ATPAF1-201ENST00000329231 DMRTA1Q5VZB9 504 aa18.85■□□□□ 0.61
ATPAF1-201ENST00000329231 RAB19A4D1S5 217 aa18.84■□□□□ 0.61
ATPAF1-201ENST00000329231 LINC00315P59091 139 aa18.84■□□□□ 0.61
ATPAF1-201ENST00000329231 ZNF575Q86XF7 245 aa18.84■□□□□ 0.61
ATPAF1-201ENST00000329231 SCRT2Q9NQ03 307 aa18.84■□□□□ 0.61
ATPAF1-201ENST00000329231 K7EP13 123 aa18.83■□□□□ 0.6
ATPAF1-201ENST00000329231 GNG4P50150 75 aa18.83■□□□□ 0.6
ATPAF1-201ENST00000329231 PRR27Q6MZM9 219 aa18.83■□□□□ 0.6
ATPAF1-201ENST00000329231 WFDC10BQ8IUB3 73 aa18.83■□□□□ 0.6
ATPAF1-201ENST00000329231 SMIM12Q96EX1 92 aa18.83■□□□□ 0.6
ATPAF1-201ENST00000329231 TEX261Q6UWH6 196 aa18.82■□□□□ 0.6
ATPAF1-201ENST00000329231 JPT2Q9H910 190 aa18.82■□□□□ 0.6
ATPAF1-201ENST00000329231 RHODO00212 210 aa18.81■□□□□ 0.6
ATPAF1-201ENST00000329231 IGLV2-8P01709 118 aa18.81■□□□□ 0.6
ATPAF1-201ENST00000329231 EVI2AP22794 236 aa18.81■□□□□ 0.6
ATPAF1-201ENST00000329231 PKHD1P08F94 4074 aa18.8■□□□□ 0.6
ATPAF1-201ENST00000329231 DNAH10OSP0CZ25 163 aa18.8■□□□□ 0.6
ATPAF1-201ENST00000329231 UFSP1Q6NVU6 142 aa18.8■□□□□ 0.6
ATPAF1-201ENST00000329231 Q6ZSN1 163 aa18.8■□□□□ 0.6
ATPAF1-201ENST00000329231 ZFP82Q8N141 532 aa18.8■□□□□ 0.6
ATPAF1-201ENST00000329231 SAMD10Q9BYL1 202 aa18.8■□□□□ 0.6
ATPAF1-201ENST00000329231 PKD1P98161 4303 aa18.8■□□□□ 0.6
ATPAF1-201ENST00000329231 TRBV20OR9-2A0A075B6H5 130 aa18.79■□□□□ 0.6
ATPAF1-201ENST00000329231 TMEM250H0YL14 139 aa18.79■□□□□ 0.6
ATPAF1-201ENST00000329231 M0R381 172 aa18.79■□□□□ 0.6
ATPAF1-201ENST00000329231 CXCL1P09341 107 aa18.79■□□□□ 0.6
ATPAF1-201ENST00000329231 MED14OSP0DP75 135 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms