RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 PRTN3P24158 256 aa10.9□□□□□ -0.66
CHRNA3-201ENST00000326828 RPL39P62891 51 aaKnown RBP10.9□□□□□ -0.66
CHRNA3-201ENST00000326828 CDIP1Q9H305 208 aa10.9□□□□□ -0.66
CHRNA3-201ENST00000326828 NOTCH3Q9UM47 2321 aa10.9□□□□□ -0.66
CHRNA3-201ENST00000326828 DOPEY2Q9Y3R5 2298 aa10.9□□□□□ -0.66
CHRNA3-201ENST00000326828 CFAP126Q5VTH2 177 aa10.9□□□□□ -0.66
CHRNA3-201ENST00000326828 METTL26Q96S19 204 aa10.9□□□□□ -0.66
CHRNA3-201ENST00000326828 LINC01546A6NGU7 62 aa10.9□□□□□ -0.67
CHRNA3-201ENST00000326828 Q6ZS46 218 aa10.9□□□□□ -0.67
CHRNA3-201ENST00000326828 ZFAND3Q9H8U3 227 aa10.9□□□□□ -0.67
CHRNA3-201ENST00000326828 JPT2Q9H910 190 aa10.9□□□□□ -0.67
CHRNA3-201ENST00000326828 OR11H6Q8NGC7 330 aa10.89□□□□□ -0.67
CHRNA3-201ENST00000326828 TIMD4Q96H15 378 aa10.89□□□□□ -0.67
CHRNA3-201ENST00000326828 CLPSL1A2RUU4 121 aa10.89□□□□□ -0.67
CHRNA3-201ENST00000326828 ORMDL2Q53FV1 153 aa10.89□□□□□ -0.67
CHRNA3-201ENST00000326828 NEXN-AS1Q8NBZ9 246 aa10.89□□□□□ -0.67
CHRNA3-201ENST00000326828 CCDC140Q96MF4 163 aa10.89□□□□□ -0.67
CHRNA3-201ENST00000326828 BEX4Q9NWD9 120 aaPredicted RBP10.89□□□□□ -0.67
CHRNA3-201ENST00000326828 A0A087WWL8 130 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 TMEM238LA0A1B0GVL6 79 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 A6NJY4 79 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 C20orf173Q96LM9 149 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 PSMG3-AS1Q96PY0 264 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 SLC50A1Q9BRV3 221 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 TCL1BO95988 128 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 FAM74A4Q5TZK3 123 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 RNF183Q96D59 192 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 Q6ZUT4 128 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 Q8N9W7 124 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 TP53TG1Q9Y2A0 90 aa10.88□□□□□ -0.67
CHRNA3-201ENST00000326828 Q8NA96 180 aa10.87□□□□□ -0.67
CHRNA3-201ENST00000326828 TOMM6Q96B49 74 aa10.87□□□□□ -0.67
CHRNA3-201ENST00000326828 PRSS47A8MTI9 375 aa10.87□□□□□ -0.67
CHRNA3-201ENST00000326828 IGHV3-11P01762 117 aa10.87□□□□□ -0.67
CHRNA3-201ENST00000326828 CARD19Q96LW7 228 aa10.87□□□□□ -0.67
CHRNA3-201ENST00000326828 ZFP36P26651 326 aaKnown RBP10.86□□□□□ -0.67
CHRNA3-201ENST00000326828 CSPG4Q6UVK1 2322 aa10.86□□□□□ -0.67
CHRNA3-201ENST00000326828 OPRPNQ99935 248 aaPredicted RBP10.86□□□□□ -0.67
CHRNA3-201ENST00000326828 ZNF256Q9Y2P7 627 aaPredicted RBP10.86□□□□□ -0.67
CHRNA3-201ENST00000326828 CRYBG3Q68DQ2 2970 aa10.86□□□□□ -0.67
CHRNA3-201ENST00000326828 C1orf122Q6ZSJ8 110 aa10.86□□□□□ -0.67
CHRNA3-201ENST00000326828 ZNF48Q96MX3 618 aaPredicted RBP10.86□□□□□ -0.67
CHRNA3-201ENST00000326828 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
CHRNA3-201ENST00000326828 ASIPP42127 132 aa10.85□□□□□ -0.67
CHRNA3-201ENST00000326828 SRSF2Q01130 221 aaKnown RBP10.85□□□□□ -0.67
CHRNA3-201ENST00000326828 Q1RN00 199 aa10.85□□□□□ -0.67
CHRNA3-201ENST00000326828 TRPT1Q86TN4 253 aaKnown RBP10.85□□□□□ -0.67
CHRNA3-201ENST00000326828 LY6G5BQ8NDX9 201 aa10.85□□□□□ -0.67
CHRNA3-201ENST00000326828 DPH3P1Q9H4G8 78 aa10.85□□□□□ -0.67
CHRNA3-201ENST00000326828 IGKV3-20P01619 116 aa10.85□□□□□ -0.67
CHRNA3-201ENST00000326828 TRAV12-1A0A0B4J245 112 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 TRBV12-3P01733 135 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 ANKRD29Q8N6D5 301 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 TMEM190Q8WZ59 177 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 A8MWV9 139 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 ODF3BA8MYP8 253 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 C9JAW5 83 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 UNQ9165/PRO28630Q6UXU0 137 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 NDUFA11Q86Y39 141 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 ANAPC13Q9BS18 74 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 VPS13CQ709C8 3753 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 CCL21O00585 134 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 CRIP2P52943 208 aaPredicted RBP10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 CDSNQ15517 529 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 TCTEX1D4Q5JR98 221 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 OR10J6PQ8NGY7 276 aa10.84□□□□□ -0.67
CHRNA3-201ENST00000326828 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.68
CHRNA3-201ENST00000326828 RBAKDNA6NC62 111 aa10.83□□□□□ -0.68
CHRNA3-201ENST00000326828 ADARB2-AS1A8MUL3 147 aa10.83□□□□□ -0.68
CHRNA3-201ENST00000326828 EEF1AKMT3Q96AZ1 226 aa10.83□□□□□ -0.68
CHRNA3-201ENST00000326828 CFC1BP0CG36 223 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 CFC1P0CG37 223 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 PPDPFLQ8WWR9 84 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 UBTD1Q9HAC8 227 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 TRBV20-1A0A075B6N2 111 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 IGHV4-39P01824 125 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 FAM110DQ8TAY7 271 aaPredicted RBP10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 A0A0J9YY99 117 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 CRYGDP07320 174 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 SAA4P35542 130 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 UBE2D1P51668 147 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 HERVK_113P61574 105 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 TEN1Q86WV5 123 aa10.82□□□□□ -0.68
CHRNA3-201ENST00000326828 CD7P09564 240 aa10.81□□□□□ -0.68
CHRNA3-201ENST00000326828 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
CHRNA3-201ENST00000326828 C2CD3Q4AC94 2353 aa10.81□□□□□ -0.68
CHRNA3-201ENST00000326828 MUC4Q99102 2169 aa10.81□□□□□ -0.68
CHRNA3-201ENST00000326828 TRAV21A0A0B4J279 112 aa10.81□□□□□ -0.68
CHRNA3-201ENST00000326828 NPC2P61916 151 aa10.8□□□□□ -0.68
CHRNA3-201ENST00000326828 ZFAND2AQ8N6M9 145 aa10.8□□□□□ -0.68
CHRNA3-201ENST00000326828 B5MCH6 92 aa10.8□□□□□ -0.68
CHRNA3-201ENST00000326828 TSHBP01222 138 aa10.8□□□□□ -0.68
CHRNA3-201ENST00000326828 Q8N6K4 173 aa10.8□□□□□ -0.68
CHRNA3-201ENST00000326828 NACAE9PAV3 2078 aa10.8□□□□□ -0.68
CHRNA3-201ENST00000326828 M0R1W7 72 aa10.8□□□□□ -0.68
CHRNA3-201ENST00000326828 COX6B1P14854 86 aa10.8□□□□□ -0.68
CHRNA3-201ENST00000326828 LGALS3P17931 250 aaKnown RBP10.79□□□□□ -0.68
CHRNA3-201ENST00000326828 ZNF580Q9UK33 172 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms