RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 TMEM61Q8N0U2 210 aa11.38□□□□□ -0.59
NUP98-201ENST00000324932 PATE2Q6UY27 113 aa11.38□□□□□ -0.59
NUP98-201ENST00000324932 SVIPQ8NHG7 77 aa11.38□□□□□ -0.59
NUP98-201ENST00000324932 DOCK6Q96HP0 2047 aa11.38□□□□□ -0.59
NUP98-201ENST00000324932 IGKV1-17P01599 117 aa11.38□□□□□ -0.59
NUP98-201ENST00000324932 SP5Q6BEB4 398 aaPredicted RBP11.37□□□□□ -0.59
NUP98-201ENST00000324932 C14orf132Q9NPU4 83 aa11.37□□□□□ -0.59
NUP98-201ENST00000324932 MRPL23Q16540 153 aaKnown RBP11.37□□□□□ -0.59
NUP98-201ENST00000324932 BAALCQ8WXS3 180 aa11.37□□□□□ -0.59
NUP98-201ENST00000324932 ZNF524Q96C55 264 aa11.37□□□□□ -0.59
NUP98-201ENST00000324932 SPRY2O43597 315 aa11.37□□□□□ -0.59
NUP98-201ENST00000324932 PRB2P02812 416 aaPredicted RBP11.37□□□□□ -0.59
NUP98-201ENST00000324932 NRXN2Q9P2S2 1712 aa11.37□□□□□ -0.59
NUP98-201ENST00000324932 MED14OSP0DP75 135 aa11.36□□□□□ -0.59
NUP98-201ENST00000324932 GTSF1Q8WW33 167 aa11.36□□□□□ -0.59
NUP98-201ENST00000324932 GREB1LQ9C091 1923 aaPredicted RBP11.36□□□□□ -0.59
NUP98-201ENST00000324932 CXCL5P42830 114 aa11.36□□□□□ -0.59
NUP98-201ENST00000324932 C16orf74Q96GX8 76 aa11.36□□□□□ -0.59
NUP98-201ENST00000324932 PDCD11Q14690 1871 aaKnown RBP11.36□□□□□ -0.59
NUP98-201ENST00000324932 K7EIM0 57 aa11.36□□□□□ -0.59
NUP98-201ENST00000324932 RPL18AQ02543 176 aaKnown RBP11.36□□□□□ -0.59
NUP98-201ENST00000324932 DOCK11Q5JSL3 2073 aa11.36□□□□□ -0.59
NUP98-201ENST00000324932 ZNF503Q96F45 646 aa11.36□□□□□ -0.59
NUP98-201ENST00000324932 MRPL36Q9P0J6 103 aaKnown RBP11.36□□□□□ -0.59
NUP98-201ENST00000324932 PLA2G2EQ9NZK7 142 aa11.36□□□□□ -0.59
NUP98-201ENST00000324932 PROP1O75360 226 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 PRR30Q53SZ7 412 aaPredicted RBP11.35□□□□□ -0.59
NUP98-201ENST00000324932 MAPK1IP1LQ8NDC0 245 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 BRK1Q8WUW1 75 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 PKDREJQ9NTG1 2253 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 Q8N1Y9 231 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 NPBQ8NG41 125 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 TP53BP1Q12888 1972 aaPredicted RBP11.35□□□□□ -0.59
NUP98-201ENST00000324932 IGLV11-55A0A075B6I3 123 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 K7ENP7 123 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 CTRLP40313 264 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 TIRAPP58753 221 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 ODF1Q14990 250 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 C11orf53Q8IXP5 236 aa11.35□□□□□ -0.59
NUP98-201ENST00000324932 HIGD2BQ4VC39 106 aa11.34□□□□□ -0.59
NUP98-201ENST00000324932 CLEC2BQ92478 149 aa11.34□□□□□ -0.59
NUP98-201ENST00000324932 HOXB4P17483 251 aaPredicted RBP11.34□□□□□ -0.59
NUP98-201ENST00000324932 Q96MF0 132 aa11.34□□□□□ -0.59
NUP98-201ENST00000324932 GYPEP15421 78 aa11.34□□□□□ -0.59
NUP98-201ENST00000324932 FAM167A-AS1Q96KT0 104 aa11.34□□□□□ -0.59
NUP98-201ENST00000324932 CTSZQ9UBR2 303 aa11.34□□□□□ -0.59
NUP98-201ENST00000324932 TMEM256-PLSCR3K7ERE1 68 aa11.34□□□□□ -0.59
NUP98-201ENST00000324932 RPL39P62891 51 aaKnown RBP11.34□□□□□ -0.59
NUP98-201ENST00000324932 DAND5Q8N907 189 aa11.34□□□□□ -0.59
NUP98-201ENST00000324932 CENPVL3A0A0U1RRI6 287 aa11.34□□□□□ -0.59
NUP98-201ENST00000324932 VPREB3Q9UKI3 123 aa11.34□□□□□ -0.59
NUP98-201ENST00000324932 NDUFA1O15239 70 aa11.33□□□□□ -0.6
NUP98-201ENST00000324932 CTSGP08311 255 aa11.33□□□□□ -0.6
NUP98-201ENST00000324932 C16orf54Q6UWD8 224 aa11.33□□□□□ -0.6
NUP98-201ENST00000324932 TRBV6-1A0A0K0K1D8 114 aa11.33□□□□□ -0.6
NUP98-201ENST00000324932 Q9HAA7 133 aa11.33□□□□□ -0.6
NUP98-201ENST00000324932 WNK3Q9BYP7 1800 aa11.33□□□□□ -0.6
NUP98-201ENST00000324932 ACACAQ13085 2346 aa11.33□□□□□ -0.6
NUP98-201ENST00000324932 SPATA12Q7Z6I5 190 aa11.33□□□□□ -0.6
NUP98-201ENST00000324932 FAM215AQ9Y5M1 114 aa11.33□□□□□ -0.6
NUP98-201ENST00000324932 GREB1Q4ZG55 1949 aa11.32□□□□□ -0.6
NUP98-201ENST00000324932 DIRC1Q969H9 104 aa11.32□□□□□ -0.6
NUP98-201ENST00000324932 FGF23Q9GZV9 251 aaPredicted RBP11.32□□□□□ -0.6
NUP98-201ENST00000324932 IGHV1-58A0A0C4DH39 117 aa11.32□□□□□ -0.6
NUP98-201ENST00000324932 NDUFA11Q86Y39 141 aa11.32□□□□□ -0.6
NUP98-201ENST00000324932 TET1Q8NFU7 2136 aa11.32□□□□□ -0.6
NUP98-201ENST00000324932 IGHV7-81A0A0B4J1V7 117 aa11.32□□□□□ -0.6
NUP98-201ENST00000324932 C9orf47Q6ZRZ4 202 aa11.32□□□□□ -0.6
NUP98-201ENST00000324932 Q6ZUT4 128 aa11.32□□□□□ -0.6
NUP98-201ENST00000324932 IGLV10-54A0A075B6I4 117 aa11.31□□□□□ -0.6
NUP98-201ENST00000324932 DKK4Q9UBT3 224 aa11.31□□□□□ -0.6
NUP98-201ENST00000324932 PTH2Q96A98 100 aa11.31□□□□□ -0.6
NUP98-201ENST00000324932 PLXNA1Q9UIW2 1896 aa11.31□□□□□ -0.6
NUP98-201ENST00000324932 CACNA1BQ00975 2339 aa11.31□□□□□ -0.6
NUP98-201ENST00000324932 TRBV12-3P01733 135 aa11.31□□□□□ -0.6
NUP98-201ENST00000324932 USF3Q68DE3 2245 aa11.3□□□□□ -0.6
NUP98-201ENST00000324932 Q6ZSR3 168 aa11.3□□□□□ -0.6
NUP98-201ENST00000324932 AJUBAQ96IF1 538 aa11.3□□□□□ -0.6
NUP98-201ENST00000324932 TRBV7-3A0A075B6L6 115 aa11.3□□□□□ -0.6
NUP98-201ENST00000324932 RNF183Q96D59 192 aa11.3□□□□□ -0.6
NUP98-201ENST00000324932 CACNA1HO95180 2353 aa11.3□□□□□ -0.6
NUP98-201ENST00000324932 SCN5AQ14524 2016 aa11.3□□□□□ -0.6
NUP98-201ENST00000324932 WI2-2373I1.2A0A1W2PRP0 233 aa11.3□□□□□ -0.6
NUP98-201ENST00000324932 UQCRQO14949 82 aa11.3□□□□□ -0.6
NUP98-201ENST00000324932 CCL24O00175 119 aa11.29□□□□□ -0.6
NUP98-201ENST00000324932 DEFB112Q30KQ8 113 aa11.29□□□□□ -0.6
NUP98-201ENST00000324932 NCR3O14931 201 aa11.29□□□□□ -0.6
NUP98-201ENST00000324932 NDUFV3P56181 108 aaKnown RBP11.29□□□□□ -0.6
NUP98-201ENST00000324932 APRG1Q8IVJ8 170 aa11.29□□□□□ -0.6
NUP98-201ENST00000324932 MIR7-3HGQ8N6C7 128 aa11.29□□□□□ -0.6
NUP98-201ENST00000324932 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
NUP98-201ENST00000324932 C20orf203Q8NBC4 194 aa11.29□□□□□ -0.6
NUP98-201ENST00000324932 C2orf70A6NJV1 201 aa11.28□□□□□ -0.6
NUP98-201ENST00000324932 IGHV4-59P01825 116 aa11.28□□□□□ -0.6
NUP98-201ENST00000324932 ZMAT4Q9H898 229 aa11.28□□□□□ -0.6
NUP98-201ENST00000324932 MRPL55Q7Z7F7 128 aaKnown RBP11.28□□□□□ -0.6
NUP98-201ENST00000324932 PHF3Q92576 2039 aaKnown RBP11.28□□□□□ -0.6
NUP98-201ENST00000324932 LCTP09848 1927 aa11.28□□□□□ -0.6
NUP98-201ENST00000324932 TCL1BO95988 128 aa11.27□□□□□ -0.6
NUP98-201ENST00000324932 PRAC2D3DTV9 90 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms