RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 ODF3Q96PU9 254 aa11.88□□□□□ -0.51
SMARCD2-202ENST00000323347 DPH3P1Q9H4G8 78 aa11.88□□□□□ -0.51
SMARCD2-202ENST00000323347 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
SMARCD2-202ENST00000323347 F6UB75 175 aa11.88□□□□□ -0.51
SMARCD2-202ENST00000323347 DEFB1P60022 68 aa11.88□□□□□ -0.51
SMARCD2-202ENST00000323347 TRAV26-2A0A0B4J265 109 aa11.87□□□□□ -0.51
SMARCD2-202ENST00000323347 RNASE3P12724 160 aaKnown RBP11.87□□□□□ -0.51
SMARCD2-202ENST00000323347 RNASE4P34096 147 aaKnown RBP11.87□□□□□ -0.51
SMARCD2-202ENST00000323347 SEC11AP67812 179 aa11.87□□□□□ -0.51
SMARCD2-202ENST00000323347 C18orf15Q96N68 181 aa11.87□□□□□ -0.51
SMARCD2-202ENST00000323347 SMIM2Q9BVW6 85 aa11.87□□□□□ -0.51
SMARCD2-202ENST00000323347 TMEM95Q3KNT9 176 aa11.86□□□□□ -0.51
SMARCD2-202ENST00000323347 TMEM97Q5BJF2 176 aa11.86□□□□□ -0.51
SMARCD2-202ENST00000323347 COX6B1P14854 86 aa11.86□□□□□ -0.51
SMARCD2-202ENST00000323347 S100A4P26447 101 aaKnown RBP11.86□□□□□ -0.51
SMARCD2-202ENST00000323347 WFDC3Q8IUB2 231 aa11.86□□□□□ -0.51
SMARCD2-202ENST00000323347 RASL10AQ92737 203 aa11.86□□□□□ -0.51
SMARCD2-202ENST00000323347 PHLDA3Q9Y5J5 127 aa11.86□□□□□ -0.51
SMARCD2-202ENST00000323347 LGALS9O00182 355 aa11.85□□□□□ -0.51
SMARCD2-202ENST00000323347 PRSS1P07477 247 aa11.85□□□□□ -0.51
SMARCD2-202ENST00000323347 HLA-DRB4P13762 266 aa11.85□□□□□ -0.51
SMARCD2-202ENST00000323347 HIST2H2BCQ6DN03 193 aa11.85□□□□□ -0.51
SMARCD2-202ENST00000323347 HLA-DRB4X5D2U9 266 aa11.85□□□□□ -0.51
SMARCD2-202ENST00000323347 VPS13CQ709C8 3753 aa11.85□□□□□ -0.51
SMARCD2-202ENST00000323347 GAGE12BA1L429 117 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 J3KRW8 73 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 GNRH2O43555 120 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 PPP1R17O96001 155 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 TGFAP01135 160 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 IGKCP01834 107 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 ELANEP08246 267 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 EDN2P20800 178 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 Q6YL49 198 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 RNF152Q8N8N0 203 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 VPREB3Q9UKI3 123 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 KIF25-AS1Q9Y6Z4 181 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 C2CD3Q4AC94 2353 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 A1L4Q6 167 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 DPM2O94777 84 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 RPL32P62910 135 aaKnown RBP11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 ORMDL2Q53FV1 153 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 ADAMTSL5Q6ZMM2 481 aa11.84□□□□□ -0.51
SMARCD2-202ENST00000323347 TRAV12-1A0A0B4J245 112 aa11.83□□□□□ -0.52
SMARCD2-202ENST00000323347 RNF223E7ERA6 249 aa11.83□□□□□ -0.52
SMARCD2-202ENST00000323347 HSD52Q0P140 79 aa11.83□□□□□ -0.52
SMARCD2-202ENST00000323347 AP1S3Q96PC3 154 aa11.83□□□□□ -0.52
SMARCD2-202ENST00000323347 FOXC2Q99958 501 aa11.83□□□□□ -0.52
SMARCD2-202ENST00000323347 IGKV3-7A0A075B6H7 116 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 IGHV4OR15-8A0A075B7B6 117 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 A0A087WW49 117 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 A0A087WX48 190 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 LGALS1P09382 135 aaKnown RBP11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 LINC00315P59091 139 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 C10orf99Q6UWK7 81 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 C14orf178Q8N769 122 aaPredicted RBP11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 HIGD1BQ9P298 99 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 ZFHX3Q15911 3703 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 K7EQG2 157 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 IGHV4-31P0DP07 118 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 SRD5A1P18405 259 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 PCP2Q8IVA1 136 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 TOMM6Q96B49 74 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 ZNF702PQ9H963 129 aa11.82□□□□□ -0.52
SMARCD2-202ENST00000323347 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.81□□□□□ -0.521e-7■■■■□ 26.1
SMARCD2-202ENST00000323347 SCGB1A1P11684 91 aa11.81□□□□□ -0.52
SMARCD2-202ENST00000323347 AMMECR1LQ6DCA0 310 aa11.81□□□□□ -0.52
SMARCD2-202ENST00000323347 LRRC75A-AS1Q8N1F1 130 aa11.81□□□□□ -0.52
SMARCD2-202ENST00000323347 UBE2E2Q96LR5 201 aa11.81□□□□□ -0.52
SMARCD2-202ENST00000323347 BEX4Q9NWD9 120 aaPredicted RBP11.81□□□□□ -0.52
SMARCD2-202ENST00000323347 A0A0J9YX75 114 aa11.8□□□□□ -0.52
SMARCD2-202ENST00000323347 FAM159AQ6UWV7 190 aa11.8□□□□□ -0.52
SMARCD2-202ENST00000323347 NBPF19A0A087WUL8 3843 aa11.8□□□□□ -0.52
SMARCD2-202ENST00000323347 C7orf71A4D174 169 aa11.8□□□□□ -0.52
SMARCD2-202ENST00000323347 G3V4G9 280 aa11.8□□□□□ -0.52
SMARCD2-202ENST00000323347 IGKV2D-26A0A0A0MRZ7 120 aa11.79□□□□□ -0.52
SMARCD2-202ENST00000323347 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.79□□□□□ -0.52
SMARCD2-202ENST00000323347 NMUP48645 174 aa11.79□□□□□ -0.52
SMARCD2-202ENST00000323347 MRPL35Q9NZE8 188 aaKnown RBP11.79□□□□□ -0.52
SMARCD2-202ENST00000323347 H3BRM9 83 aa11.78□□□□□ -0.52
SMARCD2-202ENST00000323347 SPRY2O43597 315 aa11.78□□□□□ -0.52
SMARCD2-202ENST00000323347 SNRPD3P62318 126 aaKnown RBP11.78□□□□□ -0.52
SMARCD2-202ENST00000323347 Q8N2B8 174 aa11.78□□□□□ -0.52
SMARCD2-202ENST00000323347 RPL39LQ96EH5 51 aaKnown RBP11.78□□□□□ -0.52
SMARCD2-202ENST00000323347 C9orf85Q96MD7 179 aa11.78□□□□□ -0.52
SMARCD2-202ENST00000323347 ITPR2Q14571 2701 aa11.78□□□□□ -0.52
SMARCD2-202ENST00000323347 A6NDN8 102 aa11.78□□□□□ -0.52
SMARCD2-202ENST00000323347 PLNP26678 52 aa11.78□□□□□ -0.52
SMARCD2-202ENST00000323347 LINC01549A6NIU2 74 aa11.77□□□□□ -0.53
SMARCD2-202ENST00000323347 H7C1H1 209 aa11.77□□□□□ -0.53
SMARCD2-202ENST00000323347 ZC2HC1BQ5TFG8 222 aa11.77□□□□□ -0.53
SMARCD2-202ENST00000323347 GTF2H5Q6ZYL4 71 aa11.77□□□□□ -0.53
SMARCD2-202ENST00000323347 F8VRH5 84 aa11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 NEXN-AS1Q8NBZ9 246 aa11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 SELENOKQ9Y6D0 94 aa11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 CELSR1Q9NYQ6 3014 aa11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 CENPEQ02224 2701 aa11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 IGHV3-16A0A0C4DH30 117 aa11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 DUSP14O95147 198 aaKnown RBP11.76□□□□□ -0.53
SMARCD2-202ENST00000323347 MGPP08493 103 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms