RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PIFOQ8TCI5 191 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 H3BUA1 57 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 COX7A2LO14548 114 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 ZFYVE26Q68DK2 2539 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 MCRIP2Q9BUT9 160 aaKnown RBP7.79□□□□□ -1.16
COL12A1-201ENST00000322507 IGLC6P0CF74 106 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 GNLYP22749 145 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 LMO1P25800 156 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 C2orf66Q6UXQ4 117 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 SPACA3Q8IXA5 215 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 TMEM61Q8N0U2 210 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 EPOPA6NHQ4 379 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 PSCAO43653 123 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 QRFPP83859 136 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 Q6P435 159 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 TRBV25-1A0A075B6N4 114 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 RPL18AQ02543 176 aaKnown RBP7.78□□□□□ -1.16
COL12A1-201ENST00000322507 K7EN84 100 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 HTN3P15516 51 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 EXOC3-AS1Q8N2X6 119 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 FAM19A5Q7Z5A7 132 aaPredicted RBP7.78□□□□□ -1.16
COL12A1-201ENST00000322507 NUP210LQ5VU65 1888 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 IGKV1-5P01602 117 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 APOC4P55056 127 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 GFI1Q99684 422 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 LENEPQ9Y5L5 61 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 THSD7BQ9C0I4 1608 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 TRAV4A0A0B4J268 109 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 IGKV4-1P06312 121 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 FAM19A3Q7Z5A8 133 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 ABCA2Q9BZC7 2435 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 CRYGCP07315 174 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 VPREB3Q9UKI3 123 aa7.78□□□□□ -1.16
COL12A1-201ENST00000322507 GATA1P15976 413 aaPredicted RBP7.77□□□□□ -1.16
COL12A1-201ENST00000322507 LINC00311Q8N616 119 aa7.77□□□□□ -1.17
COL12A1-201ENST00000322507 S4R3C0 116 aa7.77□□□□□ -1.17
COL12A1-201ENST00000322507 IGHV3OR16-10A0A075B7F0 116 aa7.77□□□□□ -1.17
COL12A1-201ENST00000322507 ADCYAP1P18509 176 aa7.77□□□□□ -1.17
COL12A1-201ENST00000322507 RBX1P62877 108 aa7.77□□□□□ -1.17
COL12A1-201ENST00000322507 C2CD3Q4AC94 2353 aa7.77□□□□□ -1.17
COL12A1-201ENST00000322507 ETV2O00321 342 aaPredicted RBP7.77□□□□□ -1.17
COL12A1-201ENST00000322507 MDS2Q8NDY4 140 aa7.77□□□□□ -1.17
COL12A1-201ENST00000322507 ATG2AQ2TAZ0 1938 aa7.77□□□□□ -1.17
COL12A1-201ENST00000322507 IGKV1-12A0A0C4DH73 117 aa7.77□□□□□ -1.17
COL12A1-201ENST00000322507 IGKV1D-12P01611 117 aa7.77□□□□□ -1.17
COL12A1-201ENST00000322507 PRR4Q16378 134 aa7.76□□□□□ -1.17
COL12A1-201ENST00000322507 PIP4P2Q8N4L2 257 aa7.76□□□□□ -1.17
COL12A1-201ENST00000322507 FAM110DQ8TAY7 271 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-201ENST00000322507 IGKV2-40A0A087WW87 121 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-201ENST00000322507 IGKV2D-40P01614 121 aaPredicted RBP7.76□□□□□ -1.17
COL12A1-201ENST00000322507 RPL15P61313 204 aaKnown RBP7.76□□□□□ -1.17
COL12A1-201ENST00000322507 AGPAT4-IT1Q9H0P7 198 aa7.76□□□□□ -1.17
COL12A1-201ENST00000322507 MRPL35Q9NZE8 188 aaKnown RBP7.76□□□□□ -1.17
COL12A1-201ENST00000322507 CD59P13987 128 aa7.76□□□□□ -1.17
COL12A1-201ENST00000322507 ESM1Q9NQ30 184 aa7.76□□□□□ -1.17
COL12A1-201ENST00000322507 PTPRBP23467 1997 aa7.76□□□□□ -1.17
COL12A1-201ENST00000322507 IGKV1-27A0A075B6S5 117 aa7.76□□□□□ -1.17
COL12A1-201ENST00000322507 LTBRP36941 435 aa7.76□□□□□ -1.17
COL12A1-201ENST00000322507 RNF144BQ7Z419 303 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 DYNAPQ8N1N2 210 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 RBAKDNA6NC62 111 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 NDUFA4O00483 81 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 TMEM254Q8TBM7 123 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 NRACQ8N912 160 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 IGKV1D-8A0A087WSZ0 117 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 PRB1P04280 392 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 FOXE3Q13461 319 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 MSRB2Q9Y3D2 182 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 PSPNO60542 156 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 NDUFS7O75251 213 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 P0DMU3 169 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 FAM231AP0DMU4 169 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 FAM231CP0DMU5 169 aa7.75□□□□□ -1.17
COL12A1-201ENST00000322507 C14orf178Q8N769 122 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-201ENST00000322507 COX7B2Q8TF08 81 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 RHPN1-AS1Q9BWJ2 59 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 H3BUX3 64 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 UNQ6494/PRO21346Q6UXR6 183 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 MST1P26927 711 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 ZFHX2Q9C0A1 2572 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-201ENST00000322507 CRIPAKQ8N1N5 446 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 CD177Q8N6Q3 437 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 Q6ZS92 163 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 ZNF833PQ6ZTB9 187 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 NDUFA4L2Q9NRX3 87 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 MRPL53Q96EL3 112 aaKnown RBP7.74□□□□□ -1.17
COL12A1-201ENST00000322507 A0A1W2PRX2 142 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 E9PLD3 99 aa7.74□□□□□ -1.17
COL12A1-201ENST00000322507 BPY2O14599 106 aa7.73□□□□□ -1.17
COL12A1-201ENST00000322507 C8orf49Q96NF6 230 aa7.73□□□□□ -1.17
COL12A1-201ENST00000322507 IGFL3Q6UXB1 125 aa7.73□□□□□ -1.17
COL12A1-201ENST00000322507 ODF1Q14990 250 aa7.73□□□□□ -1.17
COL12A1-201ENST00000322507 KLHL30-AS1Q8NEE0 82 aa7.73□□□□□ -1.17
COL12A1-201ENST00000322507 CCDC179H3BU77 68 aa7.73□□□□□ -1.17
COL12A1-201ENST00000322507 MRPL51Q4U2R6 128 aaKnown RBP7.73□□□□□ -1.17
COL12A1-201ENST00000322507 NTF4P34130 210 aa7.73□□□□□ -1.17
COL12A1-201ENST00000322507 FAM222AQ5U5X8 452 aa7.73□□□□□ -1.17
COL12A1-201ENST00000322507 LRRK2Q5S007 2527 aa7.73□□□□□ -1.17
COL12A1-201ENST00000322507 IGHV3OR16-8A0A075B7F1 116 aa7.73□□□□□ -1.17
COL12A1-201ENST00000322507 LINC00473A8K010 186 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms