RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 VSIG2Q96IQ7 327 aa13.36□□□□□ -0.27
SMCHD1-201ENST00000320876 E7EQL1 145 aa13.36□□□□□ -0.27
SMCHD1-201ENST00000320876 ZFP2Q6ZN57 461 aa13.36□□□□□ -0.27
SMCHD1-201ENST00000320876 IGLL5B9A064 214 aa13.35□□□□□ -0.27
SMCHD1-201ENST00000320876 IGLC1P0CG04 106 aa13.35□□□□□ -0.27
SMCHD1-201ENST00000320876 C3orf56Q8N813 242 aa13.35□□□□□ -0.27
SMCHD1-201ENST00000320876 SH2D6Q7Z4S9 175 aa13.35□□□□□ -0.27
SMCHD1-201ENST00000320876 SVIPQ8NHG7 77 aa13.35□□□□□ -0.27
SMCHD1-201ENST00000320876 NDUFB1O75438 58 aa13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 G3V318 75 aa13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 PRB1P04280 392 aa13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 OPRPNQ99935 248 aaPredicted RBP13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 C8orf31Q8N9H6 132 aa13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 ATP6V0E2Q8NHE4 81 aa13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 DAZ2Q13117 558 aaKnown RBP13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 FHL1Q13642 323 aa13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 DAZ4Q86SG3 579 aaKnown RBP13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 COX7B2Q8TF08 81 aa13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 DAZ3Q9NR90 486 aaKnown RBP13.34□□□□□ -0.27
SMCHD1-201ENST00000320876 PTPRBP23467 1997 aa13.33□□□□□ -0.28
SMCHD1-201ENST00000320876 BAALCQ8WXS3 180 aa13.33□□□□□ -0.28
SMCHD1-201ENST00000320876 FAM120AOSQ5T036 256 aa13.33□□□□□ -0.28
SMCHD1-201ENST00000320876 IL15RAQ13261 267 aa13.33□□□□□ -0.28
SMCHD1-201ENST00000320876 SONP18583 2426 aaKnown RBP13.33□□□□□ -0.28
SMCHD1-201ENST00000320876 H3BUA1 57 aa13.33□□□□□ -0.28
SMCHD1-201ENST00000320876 LY6HO94772 140 aa13.33□□□□□ -0.28
SMCHD1-201ENST00000320876 RPL18AQ02543 176 aaKnown RBP13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 CD59P13987 128 aa13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 C17orf82Q86X59 251 aaPredicted RBP13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 TMEM105Q8N8V8 129 aa13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 C14orf132Q9NPU4 83 aa13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 C15orf65H3BRN8 121 aa13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 ASPHD1Q5U4P2 390 aa13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 HIGD1BQ9P298 99 aa13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 ETDCA0A1B0GVM5 59 aa13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 IGKV2-29A2NJV5 120 aaPredicted RBP13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 DKK4Q9UBT3 224 aa13.32□□□□□ -0.28
SMCHD1-201ENST00000320876 DUX4L9Q6RFH8 374 aaPredicted RBP13.31□□□□□ -0.28
SMCHD1-201ENST00000320876 MUSTN1Q8IVN3 82 aa13.31□□□□□ -0.28
SMCHD1-201ENST00000320876 SND1-IT1Q9HBX3 110 aa13.31□□□□□ -0.28
SMCHD1-201ENST00000320876 COA6Q5JTJ3 125 aaKnown RBP13.31□□□□□ -0.28
SMCHD1-201ENST00000320876 NOP10Q9NPE3 64 aaKnown RBP13.31□□□□□ -0.28
SMCHD1-201ENST00000320876 NREPQ16612 68 aa13.31□□□□□ -0.28
SMCHD1-201ENST00000320876 J3QLI3 93 aa13.31□□□□□ -0.28
SMCHD1-201ENST00000320876 IGKV3D-7A0A0C4DH55 119 aa13.3□□□□□ -0.28
SMCHD1-201ENST00000320876 JMJD7-PLA2G4BH0Y9G9 81 aa13.3□□□□□ -0.28
SMCHD1-201ENST00000320876 LGALS9O00182 355 aa13.3□□□□□ -0.28
SMCHD1-201ENST00000320876 BUB3O43684 328 aa13.3□□□□□ -0.28
SMCHD1-201ENST00000320876 THSD7BQ9C0I4 1608 aa13.3□□□□□ -0.28
SMCHD1-201ENST00000320876 PROP1O75360 226 aa13.3□□□□□ -0.28
SMCHD1-201ENST00000320876 TRAV4A0A0B4J268 109 aa13.3□□□□□ -0.28
SMCHD1-201ENST00000320876 FOXI1Q12951 378 aa13.3□□□□□ -0.28
SMCHD1-201ENST00000320876 BRK1Q8WUW1 75 aa13.29□□□□□ -0.28
SMCHD1-201ENST00000320876 IGKV2D-24A0A075B6R9 120 aa13.29□□□□□ -0.28
SMCHD1-201ENST00000320876 G3V4G9 280 aa13.29□□□□□ -0.28
SMCHD1-201ENST00000320876 TPSG1Q9NRR2 321 aa13.29□□□□□ -0.28
SMCHD1-201ENST00000320876 IGHV4-28A0A0C4DH34 117 aa13.28□□□□□ -0.28
SMCHD1-201ENST00000320876 GNLYP22749 145 aa13.28□□□□□ -0.28
SMCHD1-201ENST00000320876 FOXE3Q13461 319 aa13.28□□□□□ -0.28
SMCHD1-201ENST00000320876 CDPF1Q6NVV7 123 aa13.28□□□□□ -0.28
SMCHD1-201ENST00000320876 IGHV4-4A0A075B6R2 117 aa13.28□□□□□ -0.28
SMCHD1-201ENST00000320876 C1orf147Q96MC9 270 aaPredicted RBP13.28□□□□□ -0.28
SMCHD1-201ENST00000320876 SEC61GP60059 68 aa13.28□□□□□ -0.28
SMCHD1-201ENST00000320876 A4D1N5 150 aa13.27□□□□□ -0.28
SMCHD1-201ENST00000320876 TMEM256-PLSCR3K7ERE1 68 aa13.27□□□□□ -0.28
SMCHD1-201ENST00000320876 TMEM61Q8N0U2 210 aa13.27□□□□□ -0.28
SMCHD1-201ENST00000320876 MRPL36Q9P0J6 103 aaKnown RBP13.27□□□□□ -0.28
SMCHD1-201ENST00000320876 K7EQD1 137 aa13.27□□□□□ -0.28
SMCHD1-201ENST00000320876 LINC01620Q4KN68 170 aa13.27□□□□□ -0.28
SMCHD1-201ENST00000320876 HIGD2BQ4VC39 106 aa13.27□□□□□ -0.28
SMCHD1-201ENST00000320876 ANKHD1Q8IWZ3 2542 aaKnown RBP13.27□□□□□ -0.29
SMCHD1-201ENST00000320876 CRYGBP07316 175 aa13.27□□□□□ -0.29
SMCHD1-201ENST00000320876 GNRH2O43555 120 aa13.27□□□□□ -0.29
SMCHD1-201ENST00000320876 WDR86Q86TI4 376 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 A0A096LPF7 62 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 RPL39LQ96EH5 51 aaKnown RBP13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 HIST2H2BCQ6DN03 193 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 Q6ZS92 163 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 KLF2Q9Y5W3 355 aaPredicted RBP13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 COX7A2LO14548 114 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 PRR20EP86478 221 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 PRR20CP86479 221 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 PRR20DP86480 221 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 PRR20BP86481 221 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 PRR20AP86496 221 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 ZNF491Q8N8L2 437 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 U3KQE9 123 aa13.26□□□□□ -0.29
SMCHD1-201ENST00000320876 RNF223E7ERA6 249 aa13.25□□□□□ -0.29
SMCHD1-201ENST00000320876 Q71RC1 249 aaPredicted RBP13.25□□□□□ -0.29
SMCHD1-201ENST00000320876 PDE6GP18545 87 aa13.25□□□□□ -0.29
SMCHD1-201ENST00000320876 TIRAPP58753 221 aa13.25□□□□□ -0.29
SMCHD1-201ENST00000320876 C16orf74Q96GX8 76 aa13.25□□□□□ -0.29
SMCHD1-201ENST00000320876 PRB2P02812 416 aaPredicted RBP13.24□□□□□ -0.29
SMCHD1-201ENST00000320876 ZMAT4Q9H898 229 aa13.24□□□□□ -0.29
SMCHD1-201ENST00000320876 LOXP28300 417 aaPredicted RBP13.24□□□□□ -0.29
SMCHD1-201ENST00000320876 ZNF503Q96F45 646 aa13.24□□□□□ -0.29
SMCHD1-201ENST00000320876 CPAMD8Q8IZJ3 1885 aa13.24□□□□□ -0.29
SMCHD1-201ENST00000320876 NAV3Q8IVL0 2385 aa13.24□□□□□ -0.29
SMCHD1-201ENST00000320876 H3BT86 120 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms