RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 LINC00467Q9BRT7 94 aa11.27□□□□□ -0.6
HNF4A-202ENST00000316673 TMEM208Q9BTX3 173 aa11.27□□□□□ -0.6
HNF4A-202ENST00000316673 SSBP4Q9BWG4 385 aaPredicted RBP11.27□□□□□ -0.6
HNF4A-202ENST00000316673 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.6
HNF4A-202ENST00000316673 GOLT1BQ9Y3E0 138 aa11.27□□□□□ -0.6
HNF4A-202ENST00000316673 ARMS2P0C7Q2 107 aa11.26□□□□□ -0.61
HNF4A-202ENST00000316673 TRGC1P0CF51 173 aa11.26□□□□□ -0.61
HNF4A-202ENST00000316673 NHLRC4P0CG21 123 aaPredicted RBP11.26□□□□□ -0.61
HNF4A-202ENST00000316673 TMEM136Q6ZRR5 245 aa11.26□□□□□ -0.61
HNF4A-202ENST00000316673 SYT8Q8NBV8 401 aa11.26□□□□□ -0.61
HNF4A-202ENST00000316673 CBY3A6NI87 242 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 H3BVH4 76 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 FXYD7P58549 80 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 LINC01587Q99440 93 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 SBSPONQ8IVN8 264 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 ZFP82Q8N141 532 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 GATD1Q8NB37 220 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 ZMAT4Q9H898 229 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 TP53TG1Q9Y2A0 90 aa11.25□□□□□ -0.61
HNF4A-202ENST00000316673 CRXO43186 299 aaPredicted RBP11.24□□□□□ -0.61
HNF4A-202ENST00000316673 NTF3P20783 257 aa11.24□□□□□ -0.61
HNF4A-202ENST00000316673 ZNF415Q09FC8 603 aa11.24□□□□□ -0.61
HNF4A-202ENST00000316673 ZNF493Q6ZR52 646 aa11.24□□□□□ -0.61
HNF4A-202ENST00000316673 XCL2Q9UBD3 114 aa11.24□□□□□ -0.61
HNF4A-202ENST00000316673 TM2D3Q9BRN9 247 aa11.23□□□□□ -0.61
HNF4A-202ENST00000316673 TMEM191AQ9H0A3 160 aa11.23□□□□□ -0.61
HNF4A-202ENST00000316673 TIMM8BQ9Y5J9 83 aaPredicted RBP11.23□□□□□ -0.61
HNF4A-202ENST00000316673 GNRH2O43555 120 aa11.22□□□□□ -0.61
HNF4A-202ENST00000316673 RCHY1Q96PM5 261 aa11.22□□□□□ -0.61
HNF4A-202ENST00000316673 SCRT2Q9NQ03 307 aa11.22□□□□□ -0.61
HNF4A-202ENST00000316673 IGHV3-16A0A0C4DH30 117 aa11.21□□□□□ -0.61
HNF4A-202ENST00000316673 SMIM17P0DL12 118 aa11.21□□□□□ -0.61
HNF4A-202ENST00000316673 AP1S3Q96PC3 154 aa11.21□□□□□ -0.61
HNF4A-202ENST00000316673 SPXQ9BT56 116 aa11.21□□□□□ -0.61
HNF4A-202ENST00000316673 SPRY2O43597 315 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST1H2BKO60814 126 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST1H2BJP06899 126 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 GIG44P09565 113 aaPredicted RBP11.2□□□□□ -0.62
HNF4A-202ENST00000316673 RNASE3P12724 160 aaKnown RBP11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST1H2BOP23527 126 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST1H2BBP33778 126 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST1H2BDP58876 126 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST1H2BCP62807 126 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST2H2BEQ16778 126 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 DEFB135Q30KP9 77 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.2□□□□□ -0.62
HNF4A-202ENST00000316673 PIK3CD-AS1Q5SR53 167 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 Q6ZQT7 251 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 OR10AG1Q8NH19 301 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST1H2BHQ93079 126 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 RNF183Q96D59 192 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST1H2BNQ99877 126 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 HIST1H2BMQ99879 126 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 TP53TG3Q9ULZ0 132 aa11.2□□□□□ -0.62
HNF4A-202ENST00000316673 PPBPP02775 128 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 HTN1P15515 57 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 SSTP61278 116 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 ZNF575Q86XF7 245 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 C9orf85Q96MD7 179 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 NDUFAF3Q9BU61 184 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 M0R381 172 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 PHOX2AO14813 284 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 OR10J3Q5JRS4 329 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 FAM104BQ5XKR9 115 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 CSNK1G2-AS1Q8NCQ2 148 aa11.19□□□□□ -0.62
HNF4A-202ENST00000316673 NXPH4O95158 308 aa11.18□□□□□ -0.62
HNF4A-202ENST00000316673 SLAQ13239 276 aa11.18□□□□□ -0.62
HNF4A-202ENST00000316673 DMRTA1Q5VZB9 504 aa11.18□□□□□ -0.62
HNF4A-202ENST00000316673 TMEM263Q8WUH6 116 aaKnown RBP11.18□□□□□ -0.62
HNF4A-202ENST00000316673 PTH2Q96A98 100 aa11.18□□□□□ -0.62
HNF4A-202ENST00000316673 OVOL2Q9BRP0 275 aa11.18□□□□□ -0.62
HNF4A-202ENST00000316673 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
HNF4A-202ENST00000316673 IGHV3OR16-12A0A075B7B8 117 aa11.17□□□□□ -0.62
HNF4A-202ENST00000316673 MUC21A0A0G2JKD1 596 aa11.17□□□□□ -0.62
HNF4A-202ENST00000316673 MUC21A0A140T8X8 626 aa11.17□□□□□ -0.62
HNF4A-202ENST00000316673 RBMY1A1P0DJD3 496 aaKnown RBP11.17□□□□□ -0.62
HNF4A-202ENST00000316673 RBMY1CP0DJD4 496 aa11.17□□□□□ -0.62
HNF4A-202ENST00000316673 SRIP30626 198 aa11.17□□□□□ -0.62
HNF4A-202ENST00000316673 RBMY1FQ15415 496 aaKnown RBP11.17□□□□□ -0.62
HNF4A-202ENST00000316673 C16orf74Q96GX8 76 aa11.17□□□□□ -0.62
HNF4A-202ENST00000316673 LAMTOR2Q9Y2Q5 125 aa11.17□□□□□ -0.62
HNF4A-202ENST00000316673 NBEAL2Q6ZNJ1 2754 aa11.16□□□□□ -0.62
HNF4A-202ENST00000316673 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
HNF4A-202ENST00000316673 M0R2P5 195 aa11.16□□□□□ -0.62
HNF4A-202ENST00000316673 PPP1R17O96001 155 aa11.16□□□□□ -0.62
HNF4A-202ENST00000316673 NDUFA6P56556 154 aa11.16□□□□□ -0.62
HNF4A-202ENST00000316673 RRN3P1Q2M238 152 aa11.16□□□□□ -0.62
HNF4A-202ENST00000316673 ZNF705AQ6ZN79 300 aaPredicted RBP11.16□□□□□ -0.62
HNF4A-202ENST00000316673 ORMDL3Q8N138 153 aa11.16□□□□□ -0.62
HNF4A-202ENST00000316673 C1orf158Q8N1D5 194 aa11.16□□□□□ -0.62
HNF4A-202ENST00000316673 MDFICQ9P1T7 246 aa11.16□□□□□ -0.62
HNF4A-202ENST00000316673 PRKDCP78527 4128 aaKnown RBP11.15□□□□□ -0.62
HNF4A-202ENST00000316673 CKS2P33552 79 aa11.15□□□□□ -0.62
HNF4A-202ENST00000316673 Q0VG73 95 aa11.15□□□□□ -0.62
HNF4A-202ENST00000316673 BAGE3Q86Y29 109 aa11.15□□□□□ -0.62
HNF4A-202ENST00000316673 OR11H2Q8NH07 326 aa11.15□□□□□ -0.62
HNF4A-202ENST00000316673 MRAP2Q96G30 205 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms