RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 TRAV12-2A0A075B6T6 113 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 OR4C46A6NHA9 309 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 PF4P02776 101 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 C3orf79P0CE67 100 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 RAB4AP20338 218 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 FXYD7P58549 80 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 PKIAP61925 76 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 TEX43Q6ZNM6 134 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 SCRT2Q9NQ03 307 aa11.62□□□□□ -0.55
CALR-201ENST00000316448 A8MTW9 85 aa11.61□□□□□ -0.55
CALR-201ENST00000316448 DUSP14O95147 198 aaKnown RBP11.61□□□□□ -0.55
CALR-201ENST00000316448 PPBPP02775 128 aa11.61□□□□□ -0.55
CALR-201ENST00000316448 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
CALR-201ENST00000316448 LEPP41159 167 aa11.61□□□□□ -0.55
CALR-201ENST00000316448 ASIPP42127 132 aa11.61□□□□□ -0.55
CALR-201ENST00000316448 SPINK13Q1W4C9 94 aa11.61□□□□□ -0.55
CALR-201ENST00000316448 ZNF664Q8N3J9 261 aa11.61□□□□□ -0.55
CALR-201ENST00000316448 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
CALR-201ENST00000316448 CKS2P33552 79 aa11.6□□□□□ -0.55
CALR-201ENST00000316448 AP5S1Q9NUS5 200 aa11.6□□□□□ -0.55
CALR-201ENST00000316448 TRAV12-3A0A0B4J271 114 aa11.6□□□□□ -0.55
CALR-201ENST00000316448 TSTD3H0UI37 97 aa11.6□□□□□ -0.55
CALR-201ENST00000316448 SPRY2O43597 315 aa11.6□□□□□ -0.55
CALR-201ENST00000316448 PMCHL1Q16048 86 aa11.6□□□□□ -0.55
CALR-201ENST00000316448 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
CALR-201ENST00000316448 LAMTOR2Q9Y2Q5 125 aa11.6□□□□□ -0.55
CALR-201ENST00000316448 ATRQ13535 2644 aa11.59□□□□□ -0.55
CALR-201ENST00000316448 C7orf71A4D174 169 aa11.59□□□□□ -0.55
CALR-201ENST00000316448 SMKR1H3BMG3 65 aa11.59□□□□□ -0.55
CALR-201ENST00000316448 GNRH2O43555 120 aa11.59□□□□□ -0.55
CALR-201ENST00000316448 NCR2O95944 276 aa11.59□□□□□ -0.55
CALR-201ENST00000316448 NPYP01303 97 aa11.59□□□□□ -0.55
CALR-201ENST00000316448 EVI2AP22794 236 aa11.59□□□□□ -0.55
CALR-201ENST00000316448 KIR2DL5BA0A0G2JN68 375 aa11.58□□□□□ -0.55
CALR-201ENST00000316448 KIR2DL5BA0A0G2JPC4 375 aa11.58□□□□□ -0.55
CALR-201ENST00000316448 CRXO43186 299 aaPredicted RBP11.58□□□□□ -0.55
CALR-201ENST00000316448 CD7P09564 240 aa11.58□□□□□ -0.55
CALR-201ENST00000316448 RNASE3P12724 160 aaKnown RBP11.58□□□□□ -0.55
CALR-201ENST00000316448 TDRG1Q3Y452 100 aa11.58□□□□□ -0.55
CALR-201ENST00000316448 KIR2DL5AQ8N109 375 aa11.58□□□□□ -0.55
CALR-201ENST00000316448 NXPH4O95158 308 aa11.58□□□□□ -0.56
CALR-201ENST00000316448 RBMY1A1P0DJD3 496 aaKnown RBP11.58□□□□□ -0.56
CALR-201ENST00000316448 RBMY1CP0DJD4 496 aa11.58□□□□□ -0.56
CALR-201ENST00000316448 S100A4P26447 101 aaKnown RBP11.58□□□□□ -0.56
CALR-201ENST00000316448 IFI27P40305 119 aaPredicted RBP11.58□□□□□ -0.56
CALR-201ENST00000316448 CDKN1BP46527 198 aa11.58□□□□□ -0.56
CALR-201ENST00000316448 RBMY1FQ15415 496 aaKnown RBP11.58□□□□□ -0.56
CALR-201ENST00000316448 BEAN1Q3B7T3 259 aa11.58□□□□□ -0.56
CALR-201ENST00000316448 FA2HQ7L5A8 372 aa11.58□□□□□ -0.56
CALR-201ENST00000316448 PRSS3P2Q8NHM4 247 aa11.58□□□□□ -0.56
CALR-201ENST00000316448 PRO1933Q9H354 126 aa11.58□□□□□ -0.56
CALR-201ENST00000316448 C19orf73Q9NVV2 129 aa11.58□□□□□ -0.56
CALR-201ENST00000316448 FBN1P35555 2871 aaKnown RBP11.57□□□□□ -0.56
CALR-201ENST00000316448 SMIM15Q7Z3B0 74 aa11.57□□□□□ -0.56
CALR-201ENST00000316448 VWFP04275 2813 aa11.57□□□□□ -0.56
CALR-201ENST00000316448 GAS8-AS1O95177 125 aa11.56□□□□□ -0.56
CALR-201ENST00000316448 BTF3P20290 206 aaKnown RBP11.56□□□□□ -0.56
CALR-201ENST00000316448 TSPOP30536 169 aa11.56□□□□□ -0.56
CALR-201ENST00000316448 FAM159AQ6UWV7 190 aa11.56□□□□□ -0.56
CALR-201ENST00000316448 WFDC10AQ9H1F0 79 aa11.56□□□□□ -0.56
CALR-201ENST00000316448 LEPROTL1O95214 131 aa11.56□□□□□ -0.56
CALR-201ENST00000316448 PHLDA3Q9Y5J5 127 aa11.56□□□□□ -0.56
CALR-201ENST00000316448 A0A096LNJ9 63 aa11.55□□□□□ -0.56
CALR-201ENST00000316448 LINC01546A6NGU7 62 aa11.55□□□□□ -0.56
CALR-201ENST00000316448 M0R381 172 aa11.55□□□□□ -0.56
CALR-201ENST00000316448 OR2K2Q8NGT1 345 aa11.55□□□□□ -0.56
CALR-201ENST00000316448 TIMM8BQ9Y5J9 83 aaPredicted RBP11.55□□□□□ -0.56
CALR-201ENST00000316448 LOC389332A0A1B0GUA5 103 aa11.54□□□□□ -0.56
CALR-201ENST00000316448 OR11H12B2RN74 326 aa11.54□□□□□ -0.56
CALR-201ENST00000316448 TNFRSF6BO95407 300 aa11.54□□□□□ -0.56
CALR-201ENST00000316448 DDTP30046 118 aa11.54□□□□□ -0.56
CALR-201ENST00000316448 LINC00173Q6ZV60 143 aa11.54□□□□□ -0.56
CALR-201ENST00000316448 MAP1LC3AQ9H492 121 aa11.54□□□□□ -0.56
CALR-201ENST00000316448 DEFB125Q8N687 156 aa11.54□□□□□ -0.56
CALR-201ENST00000316448 TMEM70Q9BUB7 260 aa11.54□□□□□ -0.56
CALR-201ENST00000316448 TRRAPQ9Y4A5 3859 aa11.54□□□□□ -0.56
CALR-201ENST00000316448 PRM2P04554 102 aa11.53□□□□□ -0.56
CALR-201ENST00000316448 NRACQ8N912 160 aa11.53□□□□□ -0.56
CALR-201ENST00000316448 MRAP2Q96G30 205 aa11.53□□□□□ -0.56
CALR-201ENST00000316448 VAMP8Q9BV40 100 aa11.53□□□□□ -0.56
CALR-201ENST00000316448 HSPB8Q9UJY1 196 aa11.53□□□□□ -0.56
CALR-201ENST00000316448 GATA1P15976 413 aaPredicted RBP11.52□□□□□ -0.56
CALR-201ENST00000316448 SPATA12Q7Z6I5 190 aa11.52□□□□□ -0.56
CALR-201ENST00000316448 TRPT1Q86TN4 253 aaKnown RBP11.52□□□□□ -0.56
CALR-201ENST00000316448 AP1S3Q96PC3 154 aa11.52□□□□□ -0.56
CALR-201ENST00000316448 SYS1-DBNDD2H3BUS1 97 aa11.52□□□□□ -0.57
CALR-201ENST00000316448 C9orf85Q96MD7 179 aa11.52□□□□□ -0.57
CALR-201ENST00000316448 C20orf144Q9BQM9 153 aa11.52□□□□□ -0.57
CALR-201ENST00000316448 DPH3P1Q9H4G8 78 aa11.52□□□□□ -0.57
CALR-201ENST00000316448 NXT2Q9NPJ8 142 aaKnown RBP11.52□□□□□ -0.57
CALR-201ENST00000316448 MUC4Q99102 2169 aa11.52□□□□□ -0.57
CALR-201ENST00000316448 NOTCH3Q9UM47 2321 aa11.51□□□□□ -0.57
CALR-201ENST00000316448 TRAV26-2A0A0B4J265 109 aa11.51□□□□□ -0.57
CALR-201ENST00000316448 IGHV3-16A0A0C4DH30 117 aa11.51□□□□□ -0.57
CALR-201ENST00000316448 PRSS47A8MTI9 375 aa11.51□□□□□ -0.57
CALR-201ENST00000316448 CLUHP3Q96NS8 147 aa11.51□□□□□ -0.57
CALR-201ENST00000316448 ZNF747Q9BV97 191 aa11.51□□□□□ -0.57
CALR-201ENST00000316448 IGLV2-18A0A075B6J9 118 aa11.5□□□□□ -0.57
CALR-201ENST00000316448 IGHV1OR15-1A0A075B7D0 117 aa11.5□□□□□ -0.57
CALR-201ENST00000316448 STHQ8IWL8 128 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms