RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 HHLA3Q9XRX5 114 aa8.33□□□□□ -1.08
SCFD1-201ENST00000311943 DNAH6Q9C0G6 4158 aa8.33□□□□□ -1.08
SCFD1-201ENST00000311943 P0DMU3 169 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 FAM231AP0DMU4 169 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 FAM231CP0DMU5 169 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 FAM162BQ5T6X4 162 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 COX8CQ7Z4L0 72 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 C11orf52Q96A22 123 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 MED9Q9NWA0 146 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 TRGV4A0A0C4DH28 118 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 TRBV6-1A0A0K0K1D8 114 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 PAX4O43316 350 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 CFAP126Q5VTH2 177 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 OR4C5Q8NGB2 326 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 SPXQ9BT56 116 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 KRTAP1-5Q9BYS1 174 aa8.32□□□□□ -1.08
SCFD1-201ENST00000311943 MGST1P10620 155 aaKnown RBP8.31□□□□□ -1.08
SCFD1-201ENST00000311943 S100A4P26447 101 aaKnown RBP8.31□□□□□ -1.08
SCFD1-201ENST00000311943 CEBPGP53567 150 aa8.31□□□□□ -1.08
SCFD1-201ENST00000311943 SRSF3P84103 164 aaKnown RBP8.31□□□□□ -1.08
SCFD1-201ENST00000311943 ZNRF2Q8NHG8 242 aa8.31□□□□□ -1.08
SCFD1-201ENST00000311943 FAM210BQ96KR6 192 aa8.31□□□□□ -1.08
SCFD1-201ENST00000311943 VAX2Q9UIW0 290 aa8.31□□□□□ -1.08
SCFD1-201ENST00000311943 TOR2AQ5JU69 321 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 C15orf53Q8NAA6 179 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 LYPD6BQ8NI32 183 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 A0A087WWL8 130 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 FBLL1A6NHQ2 334 aaKnown RBP8.3□□□□□ -1.08
SCFD1-201ENST00000311943 C9JQL5 133 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 K7EN84 100 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 M0R381 172 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 ASIPP42127 132 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 OR10AG1Q8NH19 301 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 PRO0255Q9UI72 69 aa8.3□□□□□ -1.08
SCFD1-201ENST00000311943 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
SCFD1-201ENST00000311943 RBFOX3A6NFN3 312 aa8.29□□□□□ -1.08
SCFD1-201ENST00000311943 K7EQD1 137 aa8.29□□□□□ -1.08
SCFD1-201ENST00000311943 GYPEP15421 78 aa8.29□□□□□ -1.08
SCFD1-201ENST00000311943 SLC25A29Q8N8R3 303 aa8.29□□□□□ -1.08
SCFD1-201ENST00000311943 TCEAL7Q9BRU2 100 aa8.29□□□□□ -1.08
SCFD1-201ENST00000311943 DNAH17Q9UFH2 4485 aa8.29□□□□□ -1.08
SCFD1-201ENST00000311943 RS1O15537 224 aa8.29□□□□□ -1.08
SCFD1-201ENST00000311943 TEX261Q6UWH6 196 aa8.29□□□□□ -1.08
SCFD1-201ENST00000311943 TNFRSF18Q9Y5U5 241 aa8.29□□□□□ -1.08
SCFD1-201ENST00000311943 C14orf178Q8N769 122 aaPredicted RBP8.28□□□□□ -1.08
SCFD1-201ENST00000311943 OCC1Q8TAD7 63 aa8.28□□□□□ -1.08
SCFD1-201ENST00000311943 RNASE7Q9H1E1 156 aaKnown RBP8.28□□□□□ -1.08
SCFD1-201ENST00000311943 PARLQ9H300 379 aa8.28□□□□□ -1.08
SCFD1-201ENST00000311943 IL36BQ9NZH7 164 aa8.28□□□□□ -1.08
SCFD1-201ENST00000311943 MSRB1Q9NZV6 116 aa8.28□□□□□ -1.08
SCFD1-201ENST00000311943 RTL8CO15255 209 aa8.27□□□□□ -1.09
SCFD1-201ENST00000311943 GNG4P50150 75 aa8.27□□□□□ -1.09
SCFD1-201ENST00000311943 FAM74A4Q5TZK3 123 aa8.27□□□□□ -1.09
SCFD1-201ENST00000311943 Q6ZR54 194 aa8.27□□□□□ -1.09
SCFD1-201ENST00000311943 SCRT2Q9NQ03 307 aa8.27□□□□□ -1.09
SCFD1-201ENST00000311943 C19orf71A6NCJ1 209 aa8.27□□□□□ -1.09
SCFD1-201ENST00000311943 IFNA1P01562 189 aa8.27□□□□□ -1.09
SCFD1-201ENST00000311943 GATA1P15976 413 aaPredicted RBP8.27□□□□□ -1.09
SCFD1-201ENST00000311943 BLOC1S1P78537 153 aa8.27□□□□□ -1.09
SCFD1-201ENST00000311943 UFSP1Q6NVU6 142 aa8.27□□□□□ -1.09
SCFD1-201ENST00000311943 LYPD5Q6UWN5 251 aa8.27□□□□□ -1.09
SCFD1-201ENST00000311943 BIRC6Q9NR09 4857 aa8.26□□□□□ -1.09
SCFD1-201ENST00000311943 PDE6DO43924 150 aa8.26□□□□□ -1.09
SCFD1-201ENST00000311943 CCL18P55774 89 aa8.26□□□□□ -1.09
SCFD1-201ENST00000311943 RNF212Q495C1 297 aa8.26□□□□□ -1.09
SCFD1-201ENST00000311943 TPPP3Q9BW30 176 aa8.26□□□□□ -1.09
SCFD1-201ENST00000311943 EIF5A2Q9GZV4 153 aaKnown RBP8.26□□□□□ -1.09
SCFD1-201ENST00000311943 Q9H8V8 135 aa8.26□□□□□ -1.09
SCFD1-201ENST00000311943 PKD1P98161 4303 aa8.26□□□□□ -1.09
SCFD1-201ENST00000311943 CRYGDP07320 174 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 WFDC10BQ8IUB3 73 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 Q8N3U1 123 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 PHLDA3Q9Y5J5 127 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 ICOSQ9Y6W8 199 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 H3BNG1 76 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 S100A9P06702 114 aaKnown RBP8.25□□□□□ -1.09
SCFD1-201ENST00000311943 DNLZQ5SXM8 178 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 NUDT10Q8NFP7 164 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 OR2D3Q8NGH3 330 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 NUDT11Q96G61 164 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 FAM210AQ96ND0 272 aa8.25□□□□□ -1.09
SCFD1-201ENST00000311943 SRP19P09132 144 aaKnown RBP8.24□□□□□ -1.09
SCFD1-201ENST00000311943 GAGE12JA6NER3 117 aa8.24□□□□□ -1.09
SCFD1-201ENST00000311943 GAGE1Q13065 139 aa8.24□□□□□ -1.09
SCFD1-201ENST00000311943 GAGE4Q13068 117 aa8.24□□□□□ -1.09
SCFD1-201ENST00000311943 GAGE5Q13069 117 aa8.24□□□□□ -1.09
SCFD1-201ENST00000311943 GAGE13Q4V321 117 aa8.24□□□□□ -1.09
SCFD1-201ENST00000311943 DNAH11Q96DT5 4516 aa8.23□□□□□ -1.09
SCFD1-201ENST00000311943 NBDYA0A0U1RRE5 68 aa8.23□□□□□ -1.09
SCFD1-201ENST00000311943 NEGR1Q7Z3B1 354 aa8.23□□□□□ -1.09
SCFD1-201ENST00000311943 DEFB104AQ8WTQ1 72 aa8.23□□□□□ -1.09
SCFD1-201ENST00000311943 PKHD1P08F94 4074 aa8.23□□□□□ -1.09
SCFD1-201ENST00000311943 NXPH4O95158 308 aa8.22□□□□□ -1.09
SCFD1-201ENST00000311943 SRIP30626 198 aa8.22□□□□□ -1.09
SCFD1-201ENST00000311943 MRPL23Q16540 153 aaKnown RBP8.22□□□□□ -1.09
SCFD1-201ENST00000311943 SFRP2Q96HF1 295 aa8.22□□□□□ -1.09
SCFD1-201ENST00000311943 TXNDC17Q9BRA2 123 aa8.22□□□□□ -1.09
SCFD1-201ENST00000311943 SSBP4Q9BWG4 385 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-201ENST00000311943 MRPS16Q9Y3D3 137 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms