RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 I3L2K1 104 aa9.83□□□□□ -0.84
RETREG3-201ENST00000309428 ASIPP42127 132 aa9.83□□□□□ -0.84
RETREG3-201ENST00000309428 LINC00477Q96M19 166 aa9.83□□□□□ -0.84
RETREG3-201ENST00000309428 CFHR4Q92496 578 aa9.83□□□□□ -0.84
RETREG3-201ENST00000309428 SPAG8Q99932 426 aaPredicted RBP9.83□□□□□ -0.84
RETREG3-201ENST00000309428 NF1P21359 2839 aa9.83□□□□□ -0.84
RETREG3-201ENST00000309428 KAAG1Q9UBP8 84 aa9.83□□□□□ -0.84
RETREG3-201ENST00000309428 SS18L2Q9UHA2 77 aa9.83□□□□□ -0.84
RETREG3-201ENST00000309428 IGHV3-73A0A0B4J1V6 119 aa9.82□□□□□ -0.84
RETREG3-201ENST00000309428 ADARB2-AS1A8MUL3 147 aa9.82□□□□□ -0.84
RETREG3-201ENST00000309428 F6UB75 175 aa9.82□□□□□ -0.84
RETREG3-201ENST00000309428 H7C1H1 209 aa9.82□□□□□ -0.84
RETREG3-201ENST00000309428 FAM159AQ6UWV7 190 aa9.82□□□□□ -0.84
RETREG3-201ENST00000309428 TNFRSF14Q92956 283 aa9.82□□□□□ -0.84
RETREG3-201ENST00000309428 C7orf69Q9H7B7 122 aa9.82□□□□□ -0.84
RETREG3-201ENST00000309428 CRXO43186 299 aaPredicted RBP9.82□□□□□ -0.84
RETREG3-201ENST00000309428 C2orf66Q6UXQ4 117 aa9.81□□□□□ -0.84
RETREG3-201ENST00000309428 LINC00311Q8N616 119 aa9.81□□□□□ -0.84
RETREG3-201ENST00000309428 C3orf56Q8N813 242 aa9.81□□□□□ -0.84
RETREG3-201ENST00000309428 CD7P09564 240 aa9.81□□□□□ -0.84
RETREG3-201ENST00000309428 ODF1Q14990 250 aa9.81□□□□□ -0.84
RETREG3-201ENST00000309428 FLNBO75369 2602 aaKnown RBP9.81□□□□□ -0.84
RETREG3-201ENST00000309428 FBN2P35556 2912 aa9.81□□□□□ -0.84
RETREG3-201ENST00000309428 F8W1H4 67 aa9.81□□□□□ -0.84
RETREG3-201ENST00000309428 MAPKAPK5-AS1Q8N8E1 139 aa9.81□□□□□ -0.84
RETREG3-201ENST00000309428 B5MCH6 92 aa9.8□□□□□ -0.84
RETREG3-201ENST00000309428 MRGPRG-AS1Q2M3A8 158 aa9.8□□□□□ -0.84
RETREG3-201ENST00000309428 FOXI2Q6ZQN5 318 aa9.8□□□□□ -0.84
RETREG3-201ENST00000309428 RPL39LQ96EH5 51 aaKnown RBP9.8□□□□□ -0.84
RETREG3-201ENST00000309428 TEX15Q9BXT5 2789 aa9.8□□□□□ -0.84
RETREG3-201ENST00000309428 H3BUX3 64 aa9.8□□□□□ -0.84
RETREG3-201ENST00000309428 LYPD1Q8N2G4 141 aa9.8□□□□□ -0.84
RETREG3-201ENST00000309428 FANCD2OSQ96PS1 177 aa9.8□□□□□ -0.84
RETREG3-201ENST00000309428 PLNP26678 52 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 GAGE2EQ4V326 116 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 GAGE2DQ9UEU5 116 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 SMPXQ9UHP9 88 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 VPS13CQ709C8 3753 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 RRN3P1Q2M238 152 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 IGF2-ASQ6U949 168 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 AGPAT4-IT1Q9H0P7 198 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 NCOR1P1Q9H4R4 102 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 TMEM14CQ9P0S9 112 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 IGHV3OR16-12A0A075B7B8 117 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 MYMXA0A1B0GTQ4 84 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 BLCAPP62952 87 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 Q8N8P6 123 aa9.79□□□□□ -0.84
RETREG3-201ENST00000309428 IGHV7-81A0A0B4J1V7 117 aa9.78□□□□□ -0.84
RETREG3-201ENST00000309428 IGKV3OR2-268A0A0C4DH90 116 aa9.78□□□□□ -0.84
RETREG3-201ENST00000309428 ORMDL2Q53FV1 153 aa9.78□□□□□ -0.84
RETREG3-201ENST00000309428 ZFAND6Q6FIF0 208 aa9.78□□□□□ -0.84
RETREG3-201ENST00000309428 LINC00574Q9H8X3 128 aa9.78□□□□□ -0.84
RETREG3-201ENST00000309428 CRYBA4P53673 196 aa9.78□□□□□ -0.84
RETREG3-201ENST00000309428 HOXB4P17483 251 aaPredicted RBP9.78□□□□□ -0.84
RETREG3-201ENST00000309428 MYCNOSP40205 109 aa9.78□□□□□ -0.84
RETREG3-201ENST00000309428 SUMO2P61956 95 aaKnown RBP9.78□□□□□ -0.84
RETREG3-201ENST00000309428 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
RETREG3-201ENST00000309428 EEF1AKMT3Q96AZ1 226 aa9.78□□□□□ -0.84
RETREG3-201ENST00000309428 CCL19Q99731 98 aa9.78□□□□□ -0.84
RETREG3-201ENST00000309428 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.84
RETREG3-201ENST00000309428 F8VRH5 84 aa9.77□□□□□ -0.84
RETREG3-201ENST00000309428 IGLV2-11P01706 119 aa9.77□□□□□ -0.84
RETREG3-201ENST00000309428 IGHV4-38-2P0DP08 117 aa9.77□□□□□ -0.84
RETREG3-201ENST00000309428 ZFP2Q6ZN57 461 aa9.77□□□□□ -0.84
RETREG3-201ENST00000309428 TP53TG1Q9Y2A0 90 aa9.77□□□□□ -0.84
RETREG3-201ENST00000309428 IGF1P05019 195 aa9.77□□□□□ -0.85
RETREG3-201ENST00000309428 IGHV4-61A0A0C4DH41 118 aa9.77□□□□□ -0.85
RETREG3-201ENST00000309428 UCNP55089 124 aa9.77□□□□□ -0.85
RETREG3-201ENST00000309428 RNASE13Q5GAN3 156 aaKnown RBP9.77□□□□□ -0.85
RETREG3-201ENST00000309428 ZFHX3Q15911 3703 aa9.77□□□□□ -0.85
RETREG3-201ENST00000309428 SIVA1O15304 175 aa9.76□□□□□ -0.85
RETREG3-201ENST00000309428 CTSGP08311 255 aa9.76□□□□□ -0.85
RETREG3-201ENST00000309428 MRAP2Q96G30 205 aa9.76□□□□□ -0.85
RETREG3-201ENST00000309428 FLNAP21333 2647 aaKnown RBP9.76□□□□□ -0.85
RETREG3-201ENST00000309428 PDE6HQ13956 83 aa9.76□□□□□ -0.85
RETREG3-201ENST00000309428 ZNF625Q96I27 306 aaPredicted RBP9.76□□□□□ -0.85
RETREG3-201ENST00000309428 SPXQ9BT56 116 aa9.76□□□□□ -0.85
RETREG3-201ENST00000309428 ERG28Q9UKR5 140 aa9.76□□□□□ -0.85
RETREG3-201ENST00000309428 GNRH2O43555 120 aa9.76□□□□□ -0.85
RETREG3-201ENST00000309428 COX6CP09669 75 aa9.75□□□□□ -0.85
RETREG3-201ENST00000309428 SMIM2Q9BVW6 85 aa9.75□□□□□ -0.85
RETREG3-201ENST00000309428 CHD6Q8TD26 2715 aa9.75□□□□□ -0.85
RETREG3-201ENST00000309428 TNFRSF13BO14836 293 aaPredicted RBP9.75□□□□□ -0.85
RETREG3-201ENST00000309428 NPFFO15130 113 aa9.75□□□□□ -0.85
RETREG3-201ENST00000309428 MT-ATP8P03928 68 aa9.75□□□□□ -0.85
RETREG3-201ENST00000309428 CRYGCP07315 174 aa9.75□□□□□ -0.85
RETREG3-201ENST00000309428 SLC50A1Q9BRV3 221 aa9.75□□□□□ -0.85
RETREG3-201ENST00000309428 A0A087WX48 190 aa9.75□□□□□ -0.85
RETREG3-201ENST00000309428 TSPAN13O95857 204 aa9.75□□□□□ -0.85
RETREG3-201ENST00000309428 Q6ZS46 218 aa9.75□□□□□ -0.85
RETREG3-201ENST00000309428 ZNF688P0C7X2 276 aa9.74□□□□□ -0.85
RETREG3-201ENST00000309428 A0A096LNJ9 63 aa9.74□□□□□ -0.85
RETREG3-201ENST00000309428 TRAV21A0A0B4J279 112 aa9.74□□□□□ -0.85
RETREG3-201ENST00000309428 Q8N9W7 124 aa9.74□□□□□ -0.85
RETREG3-201ENST00000309428 DUX3Q96PT4 197 aa9.74□□□□□ -0.85
RETREG3-201ENST00000309428 C10orf99Q6UWK7 81 aa9.74□□□□□ -0.85
RETREG3-201ENST00000309428 C8orf86Q6ZUL3 223 aa9.74□□□□□ -0.85
RETREG3-201ENST00000309428 VCX2Q9H322 139 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms