RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 LYRM7Q5U5X0 104 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 PCP2Q8IVA1 136 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 MINOS1-NBL1R4GNA1 71 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 MSMBP08118 114 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 NHLRC4P0CG21 123 aaPredicted RBP7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 ASIPP42127 132 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 NMUP48645 174 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 INSL3P51460 131 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 NDPQ00604 133 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 PRR25Q96S07 402 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 MAP1LC3AQ9H492 121 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 TMSB15BA0A087X1C1 80 aa7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 J3QKU1 62 aa7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 C12orf74Q32Q52 190 aa7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 C5orf47Q569G3 176 aa7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 DKK2Q9UBU2 259 aa7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 FLNAP21333 2647 aaKnown RBP7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 UNC79Q9P2D8 2635 aa7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 EGR2P11161 476 aaPredicted RBP7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 FCER1GP30273 86 aa7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 TWIST1Q15672 202 aa7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 NPBQ8NG41 125 aa7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 DLX4Q92988 240 aaPredicted RBP7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 CNFNQ9BYD5 112 aa7.95□□□□□ -1.14
APOBEC3F-201ENST00000308521 LINC01548A6NM66 108 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 NPIPB5A8MRT5 1133 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 M0QXV9 152 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 WIPF1O43516 503 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 NDUFA3O95167 84 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 NDUFV3P56181 108 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 RNF185Q96GF1 192 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 IGHV1-69DA0A0B4J2H0 117 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 PRSS29PA6NIE9 313 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 TGFAP01135 160 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 IGHV1-69P01742 117 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 EVI2AP22794 236 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 MFAP4P55083 255 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 FXYD7P58549 80 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 LY6EQ16553 131 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 TEN1Q86WV5 123 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 PSMG3-AS1Q96PY0 264 aa7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 NXT2Q9NPJ8 142 aaKnown RBP7.94□□□□□ -1.14
APOBEC3F-201ENST00000308521 B4DSR2 109 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 SMKR1H3BMG3 65 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 ZNF688P0C7X2 276 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 RPL7P18124 248 aaKnown RBP7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 ZNF575Q86XF7 245 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 Q8N6K4 173 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 HHLA3Q9XRX5 114 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 TRBV25-1A0A075B6N4 114 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 K7ERJ3 54 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 DEFB113Q30KQ7 82 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 Q8N9W7 124 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 TMEM158Q8WZ71 300 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 LINC00527Q9UJ94 153 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 VPREB3Q9UKI3 123 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 CUBNO60494 3623 aa7.93□□□□□ -1.14
APOBEC3F-201ENST00000308521 PDZD2O15018 2839 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 IGLV11-55A0A075B6I3 123 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 IGKV2-40A0A087WW87 121 aaPredicted RBP7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 OOSP1A8MZH6 123 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 ATP5LO75964 103 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 IGKV2D-40P01614 121 aaPredicted RBP7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 IGHV3-23P01764 117 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 GAGE2BQ13066 116 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 GAGE2EQ4V326 116 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 SPANXCQ9NY87 97 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 GAGE2DQ9UEU5 116 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 A0A096LNT2 108 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 IGHV7-81A0A0B4J1V7 117 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 IFITM1P13164 125 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 LEPP41159 167 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 ZNF80P51504 273 aaPredicted RBP7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 EBI3Q14213 229 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 SBSPONQ8IVN8 264 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 PTH2Q96A98 100 aa7.92□□□□□ -1.14
APOBEC3F-201ENST00000308521 IGKCP01834 107 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 PRB4P10163 310 aaPredicted RBP7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 SLC25A16P16260 332 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 DSCR9P59020 149 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 Q96MF0 132 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 FANCD2OSQ96PS1 177 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 IGKV2D-26A0A0A0MRZ7 120 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 F8W735 103 aaPredicted RBP7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 TNFRSF6BO95407 300 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 FHL3Q13643 280 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 ECSCRQ19T08 205 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 TTC32Q5I0X7 151 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 NFE4Q86UQ8 179 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 SPANXDQ9BXN6 97 aa7.91□□□□□ -1.14
APOBEC3F-201ENST00000308521 G3V318 75 aa7.9□□□□□ -1.14
APOBEC3F-201ENST00000308521 TM4SF20Q53R12 229 aa7.9□□□□□ -1.14
APOBEC3F-201ENST00000308521 AKAP9Q99996 3911 aa7.9□□□□□ -1.14
APOBEC3F-201ENST00000308521 NF1P21359 2839 aa7.9□□□□□ -1.14
APOBEC3F-201ENST00000308521 MYO9AB2RTY4 2548 aa7.9□□□□□ -1.14
APOBEC3F-201ENST00000308521 DPM2O94777 84 aa7.9□□□□□ -1.15
APOBEC3F-201ENST00000308521 WFDC3Q8IUB2 231 aa7.9□□□□□ -1.15
APOBEC3F-201ENST00000308521 Q8N8P6 123 aa7.9□□□□□ -1.15
APOBEC3F-201ENST00000308521 LINC01356Q8N9X3 169 aa7.9□□□□□ -1.15
APOBEC3F-201ENST00000308521 SMAD5-AS1Q9Y6J3 95 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms