RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 KNCNA6PVL3 124 aa8.79□□□□□ -1
TRIM40-205ENST00000307859 D6R8Y8 96 aa8.79□□□□□ -1
TRIM40-205ENST00000307859 H3BMM0 161 aa8.79□□□□□ -1
TRIM40-205ENST00000307859 M0R2Z0 102 aa8.79□□□□□ -1
TRIM40-205ENST00000307859 IGKV3-20P01619 116 aa8.79□□□□□ -1
TRIM40-205ENST00000307859 AMTP48728 403 aa8.79□□□□□ -1
TRIM40-205ENST00000307859 Q6ZWC4 215 aa8.79□□□□□ -1
TRIM40-205ENST00000307859 NIT1Q86X76 327 aa8.79□□□□□ -1
TRIM40-205ENST00000307859 ORMDL3Q8N138 153 aa8.79□□□□□ -1
TRIM40-205ENST00000307859 CHCHD1Q96BP2 118 aaKnown RBP8.79□□□□□ -1
TRIM40-205ENST00000307859 NIT2Q9NQR4 276 aa8.79□□□□□ -1
TRIM40-205ENST00000307859 HSBP1O75506 76 aa8.78□□□□□ -1
TRIM40-205ENST00000307859 RNASE3P12724 160 aaKnown RBP8.78□□□□□ -1
TRIM40-205ENST00000307859 RAB4AP20338 218 aa8.78□□□□□ -1
TRIM40-205ENST00000307859 SPINK13Q1W4C9 94 aa8.78□□□□□ -1
TRIM40-205ENST00000307859 NSUN5P1Q3KNT7 163 aa8.78□□□□□ -1
TRIM40-205ENST00000307859 SPANXN1Q5VSR9 72 aa8.78□□□□□ -1
TRIM40-205ENST00000307859 CDPF1Q6NVV7 123 aa8.78□□□□□ -1
TRIM40-205ENST00000307859 RNASEKQ6P5S7 137 aaKnown RBP8.78□□□□□ -1
TRIM40-205ENST00000307859 FAM159AQ6UWV7 190 aa8.78□□□□□ -1
TRIM40-205ENST00000307859 TRAV12-2A0A075B6T6 113 aa8.77□□□□□ -1.01
TRIM40-205ENST00000307859 RBMY1BA6NDE4 496 aaKnown RBP8.77□□□□□ -1.01
TRIM40-205ENST00000307859 RBMY1EA6NEQ0 496 aaKnown RBP8.77□□□□□ -1.01
TRIM40-205ENST00000307859 GNRH2O43555 120 aa8.77□□□□□ -1.01
TRIM40-205ENST00000307859 NXPH4O95158 308 aa8.77□□□□□ -1.01
TRIM40-205ENST00000307859 PPBPP02775 128 aa8.77□□□□□ -1.01
TRIM40-205ENST00000307859 RBMY1DP0C7P1 496 aaKnown RBP8.77□□□□□ -1.01
TRIM40-205ENST00000307859 PMCHP20382 165 aa8.77□□□□□ -1.01
TRIM40-205ENST00000307859 S100A4P26447 101 aaKnown RBP8.77□□□□□ -1.01
TRIM40-205ENST00000307859 PRELID3AQ96N28 172 aa8.77□□□□□ -1.01
TRIM40-205ENST00000307859 CLUHP3Q96NS8 147 aa8.77□□□□□ -1.01
TRIM40-205ENST00000307859 LINC00614P0C842 121 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 ZNF124Q15973 351 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 ODF3L2Q3SX64 289 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 CRXO43186 299 aaPredicted RBP8.76□□□□□ -1.01
TRIM40-205ENST00000307859 IGLV1-51P01701 117 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 EVI2AP22794 236 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 CKS2P33552 79 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 CTAG1AP78358 180 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 SMIM15Q7Z3B0 74 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 FAM19A2Q8N3H0 131 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 OR2K2Q8NGT1 345 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 LAMTOR2Q9Y2Q5 125 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 PHLDA3Q9Y5J5 127 aa8.76□□□□□ -1.01
TRIM40-205ENST00000307859 IGHV1OR15-1A0A075B7D0 117 aa8.75□□□□□ -1.01
TRIM40-205ENST00000307859 IGHV3-16A0A0C4DH30 117 aa8.75□□□□□ -1.01
TRIM40-205ENST00000307859 NPYP01303 97 aa8.75□□□□□ -1.01
TRIM40-205ENST00000307859 CD7P09564 240 aa8.75□□□□□ -1.01
TRIM40-205ENST00000307859 TIMM8BQ9Y5J9 83 aaPredicted RBP8.75□□□□□ -1.01
TRIM40-205ENST00000307859 IGHV1-24A0A0C4DH33 117 aa8.74□□□□□ -1.01
TRIM40-205ENST00000307859 SMKR1H3BMG3 65 aa8.74□□□□□ -1.01
TRIM40-205ENST00000307859 M0R381 172 aa8.74□□□□□ -1.01
TRIM40-205ENST00000307859 SAP30O75446 220 aa8.74□□□□□ -1.01
TRIM40-205ENST00000307859 NCR2O95944 276 aa8.74□□□□□ -1.01
TRIM40-205ENST00000307859 RBMY1A1P0DJD3 496 aaKnown RBP8.74□□□□□ -1.01
TRIM40-205ENST00000307859 RBMY1CP0DJD4 496 aa8.74□□□□□ -1.01
TRIM40-205ENST00000307859 RBMY1FQ15415 496 aaKnown RBP8.74□□□□□ -1.01
TRIM40-205ENST00000307859 C9orf85Q96MD7 179 aa8.74□□□□□ -1.01
TRIM40-205ENST00000307859 TENM1Q9UKZ4 2725 aa8.74□□□□□ -1.01
TRIM40-205ENST00000307859 S100A12P80511 92 aa8.73□□□□□ -1.01
TRIM40-205ENST00000307859 Q8N1Y9 231 aa8.73□□□□□ -1.01
TRIM40-205ENST00000307859 LINC00482Q8N8I6 264 aa8.73□□□□□ -1.01
TRIM40-205ENST00000307859 FAM110AQ9BQ89 295 aa8.73□□□□□ -1.01
TRIM40-205ENST00000307859 OR11H12B2RN74 326 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 SPRY2O43597 315 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 CMC4P56277 68 aaPredicted RBP8.72□□□□□ -1.01
TRIM40-205ENST00000307859 FXYD7P58549 80 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 FA2HQ7L5A8 372 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 PRSS3P2Q8NHM4 247 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 MRAP2Q96G30 205 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 AP1S3Q96PC3 154 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 DPH3P1Q9H4G8 78 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 AP5S1Q9NUS5 200 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 TRGV11A0A075B6L2 103 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 GAS8-AS1O95177 125 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 TNFRSF6BO95407 300 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 IFI27P40305 119 aaPredicted RBP8.72□□□□□ -1.01
TRIM40-205ENST00000307859 BEAN1Q3B7T3 259 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 TRPT1Q86TN4 253 aaKnown RBP8.72□□□□□ -1.01
TRIM40-205ENST00000307859 DEFB125Q8N687 156 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 Q8N976 141 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 C20orf144Q9BQM9 153 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 MAP1LC3AQ9H492 121 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 GSN-AS1Q9NRJ2 163 aa8.72□□□□□ -1.01
TRIM40-205ENST00000307859 LINC01546A6NGU7 62 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 SCGB1D1O95968 90 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 PF4P02776 101 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 C3orf79P0CE67 100 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 KRTDAPP60985 99 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 PMCHL1Q16048 86 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 POM121L12Q8N7R1 296 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 NRACQ8N912 160 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 LINC00467Q9BRT7 94 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 ZNF747Q9BV97 191 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 MDFICQ9P1T7 246 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 KIF25-AS1Q9Y6Z4 181 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 NACAE9PAV3 2078 aa8.71□□□□□ -1.02
TRIM40-205ENST00000307859 LOC389332A0A1B0GUA5 103 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms