RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PAGE4O60829 102 aa18.1■□□□□ 0.49
CDKN2A-201ENST00000304494 MED14OSP0DP75 135 aa18.1■□□□□ 0.49
CDKN2A-201ENST00000304494 TPT1P13693 172 aaKnown RBP18.1■□□□□ 0.49
CDKN2A-201ENST00000304494 ASIPP42127 132 aa18.1■□□□□ 0.49
CDKN2A-201ENST00000304494 ZNF506Q5JVG8 444 aa18.1■□□□□ 0.49
CDKN2A-201ENST00000304494 PGPEP1LA6NFU8 196 aa18.09■□□□□ 0.49
CDKN2A-201ENST00000304494 B4DEV8 164 aa18.09■□□□□ 0.49
CDKN2A-201ENST00000304494 ZC2HC1AQ96GY0 325 aa18.09■□□□□ 0.49
CDKN2A-201ENST00000304494 AKR1C3P42330 323 aa18.08■□□□□ 0.48
CDKN2A-201ENST00000304494 PIK3CD-AS1Q5SR53 167 aa18.08■□□□□ 0.48
CDKN2A-201ENST00000304494 FAM162BQ5T6X4 162 aa18.08■□□□□ 0.48
CDKN2A-201ENST00000304494 PRADC1Q9BSG0 188 aa18.08■□□□□ 0.48
CDKN2A-201ENST00000304494 TRBV6-4A0A1B0GX49 114 aa18.07■□□□□ 0.48
CDKN2A-201ENST00000304494 LTAP01374 205 aa18.07■□□□□ 0.48
CDKN2A-201ENST00000304494 H2AFB1P0C5Y9 115 aa18.07■□□□□ 0.48
CDKN2A-201ENST00000304494 LGALSLQ3ZCW2 172 aaPredicted RBP18.07■□□□□ 0.48
CDKN2A-201ENST00000304494 SLC25A29Q8N8R3 303 aa18.07■□□□□ 0.48
CDKN2A-201ENST00000304494 NHLRC2Q8NBF2 726 aa18.07■□□□□ 0.48
CDKN2A-201ENST00000304494 IL36BQ9NZH7 164 aa18.07■□□□□ 0.48
CDKN2A-201ENST00000304494 TRAV9-2A0A087WT02 112 aa18.06■□□□□ 0.48
CDKN2A-201ENST00000304494 LOC100131303A0A0U1RQF7 123 aa18.06■□□□□ 0.48
CDKN2A-201ENST00000304494 A0A1B0GV50 99 aa18.06■□□□□ 0.48
CDKN2A-201ENST00000304494 S100A9P06702 114 aaKnown RBP18.06■□□□□ 0.48
CDKN2A-201ENST00000304494 CRIP1P50238 77 aa18.06■□□□□ 0.48
CDKN2A-201ENST00000304494 LINC00315P59091 139 aa18.06■□□□□ 0.48
CDKN2A-201ENST00000304494 RHOHQ15669 191 aa18.06■□□□□ 0.48
CDKN2A-201ENST00000304494 LY96Q9Y6Y9 160 aa18.06■□□□□ 0.48
CDKN2A-201ENST00000304494 SH2D1AO60880 128 aa18.05■□□□□ 0.48
CDKN2A-201ENST00000304494 MGST1P10620 155 aaKnown RBP18.05■□□□□ 0.48
CDKN2A-201ENST00000304494 IGHV3-73A0A0B4J1V6 119 aa18.04■□□□□ 0.48
CDKN2A-201ENST00000304494 A8MWV9 139 aa18.04■□□□□ 0.48
CDKN2A-201ENST00000304494 KRBOX1C9JBD0 128 aa18.04■□□□□ 0.48
CDKN2A-201ENST00000304494 K7EP13 123 aa18.04■□□□□ 0.48
CDKN2A-201ENST00000304494 DNLZQ5SXM8 178 aa18.04■□□□□ 0.48
CDKN2A-201ENST00000304494 EIF5AL1Q6IS14 154 aaKnown RBP18.04■□□□□ 0.48
CDKN2A-201ENST00000304494 ZNF575Q86XF7 245 aa18.04■□□□□ 0.48
CDKN2A-201ENST00000304494 M0R036 132 aa18.03■□□□□ 0.48
CDKN2A-201ENST00000304494 TIRAPP58753 221 aa18.03■□□□□ 0.48
CDKN2A-201ENST00000304494 ZNF674Q2M3X9 581 aa18.03■□□□□ 0.48
CDKN2A-201ENST00000304494 TCTE3Q8IZS6 198 aa18.03■□□□□ 0.48
CDKN2A-201ENST00000304494 ZFP2Q6ZN57 461 aa18.02■□□□□ 0.48
CDKN2A-201ENST00000304494 WFDC10BQ8IUB3 73 aa18.02■□□□□ 0.48
CDKN2A-201ENST00000304494 SYT8Q8NBV8 401 aa18.02■□□□□ 0.48
CDKN2A-201ENST00000304494 H3BVH4 76 aa18.01■□□□□ 0.47
CDKN2A-201ENST00000304494 EVI2AP22794 236 aa18.01■□□□□ 0.47
CDKN2A-201ENST00000304494 RAB5CP51148 216 aa18.01■□□□□ 0.47
CDKN2A-201ENST00000304494 PARLQ9H300 379 aa18.01■□□□□ 0.47
CDKN2A-201ENST00000304494 SCO2A0A1W2PP80 73 aa18■□□□□ 0.47
CDKN2A-201ENST00000304494 C16orf90A8MZG2 172 aa18■□□□□ 0.47
CDKN2A-201ENST00000304494 LINC01559Q495D7 138 aa18■□□□□ 0.47
CDKN2A-201ENST00000304494 NFE4Q86UQ8 179 aa18■□□□□ 0.47
CDKN2A-201ENST00000304494 ARMS2P0C7Q2 107 aa17.99■□□□□ 0.47
CDKN2A-201ENST00000304494 DNAH10OSP0CZ25 163 aa17.99■□□□□ 0.47
CDKN2A-201ENST00000304494 BOLA1Q9Y3E2 137 aa17.99■□□□□ 0.47
CDKN2A-201ENST00000304494 GRIFINA4D1Z8 144 aa17.98■□□□□ 0.47
CDKN2A-201ENST00000304494 TEX46H3BTG2 121 aa17.98■□□□□ 0.47
CDKN2A-201ENST00000304494 MANBALQ9NQG1 85 aa17.98■□□□□ 0.47
CDKN2A-201ENST00000304494 DMRTA1Q5VZB9 504 aa17.97■□□□□ 0.47
CDKN2A-201ENST00000304494 Q6ZRN7 208 aaPredicted RBP17.97■□□□□ 0.47
CDKN2A-201ENST00000304494 PHLDA3Q9Y5J5 127 aa17.97■□□□□ 0.47
CDKN2A-201ENST00000304494 TRAV1-1A0A0B4J248 108 aa17.96■□□□□ 0.47
CDKN2A-201ENST00000304494 SPATA12Q7Z6I5 190 aa17.96■□□□□ 0.47
CDKN2A-201ENST00000304494 BAGE2Q86Y30 109 aa17.96■□□□□ 0.47
CDKN2A-201ENST00000304494 C10orf126Q8N4M7 172 aa17.96■□□□□ 0.47
CDKN2A-201ENST00000304494 GNG13Q9P2W3 67 aa17.96■□□□□ 0.47
CDKN2A-201ENST00000304494 TMSB15BA0A087X1C1 80 aa17.95■□□□□ 0.46
CDKN2A-201ENST00000304494 TRAV8-6A0A0B4J262 113 aa17.95■□□□□ 0.46
CDKN2A-201ENST00000304494 RHODO00212 210 aa17.95■□□□□ 0.46
CDKN2A-201ENST00000304494 C1QBP02746 253 aa17.95■□□□□ 0.46
CDKN2A-201ENST00000304494 Q6ZNX1 250 aa17.95■□□□□ 0.46
CDKN2A-201ENST00000304494 SCRT2Q9NQ03 307 aa17.95■□□□□ 0.46
CDKN2A-201ENST00000304494 IGHV3-38A0A0C4DH36 116 aa17.94■□□□□ 0.46
CDKN2A-201ENST00000304494 ATP6V0E2Q8NHE4 81 aa17.94■□□□□ 0.46
CDKN2A-201ENST00000304494 MLST8Q9BVC4 326 aa17.94■□□□□ 0.46
CDKN2A-201ENST00000304494 MSRB1Q9NZV6 116 aa17.94■□□□□ 0.46
CDKN2A-201ENST00000304494 CRYGDP07320 174 aa17.93■□□□□ 0.46
CDKN2A-201ENST00000304494 SULT1A2P50226 295 aa17.93■□□□□ 0.46
CDKN2A-201ENST00000304494 CCL20P78556 96 aa17.93■□□□□ 0.46
CDKN2A-201ENST00000304494 UFSP1Q6NVU6 142 aa17.93■□□□□ 0.46
CDKN2A-201ENST00000304494 Q6ZSN1 163 aa17.93■□□□□ 0.46
CDKN2A-201ENST00000304494 GTSF1LQ9H1H1 148 aa17.93■□□□□ 0.46
CDKN2A-201ENST00000304494 JPT2Q9H910 190 aa17.93■□□□□ 0.46
CDKN2A-201ENST00000304494 OR10J3Q5JRS4 329 aa17.92■□□□□ 0.46
CDKN2A-201ENST00000304494 LELP1Q5T871 98 aa17.92■□□□□ 0.46
CDKN2A-201ENST00000304494 SLC51BQ86UW2 128 aa17.92■□□□□ 0.46
CDKN2A-201ENST00000304494 ZFP82Q8N141 532 aa17.92■□□□□ 0.46
CDKN2A-201ENST00000304494 SAMD10Q9BYL1 202 aa17.92■□□□□ 0.46
CDKN2A-201ENST00000304494 TNFRSF18Q9Y5U5 241 aa17.92■□□□□ 0.46
CDKN2A-201ENST00000304494 M0R381 172 aa17.91■□□□□ 0.46
CDKN2A-201ENST00000304494 LINC01556Q5JQF7 62 aa17.91■□□□□ 0.46
CDKN2A-201ENST00000304494 SFRP2Q96HF1 295 aa17.91■□□□□ 0.46
CDKN2A-201ENST00000304494 RYR1P21817 5038 aa17.9■□□□□ 0.46
CDKN2A-201ENST00000304494 EREGO14944 169 aa17.9■□□□□ 0.46
CDKN2A-201ENST00000304494 CXCL1P09341 107 aa17.9■□□□□ 0.46
CDKN2A-201ENST00000304494 RPL35P42766 123 aaKnown RBP17.9■□□□□ 0.46
CDKN2A-201ENST00000304494 ERVFC1-1P60608 527 aa17.9■□□□□ 0.46
CDKN2A-201ENST00000304494 C11orf52Q96A22 123 aa17.9■□□□□ 0.46
CDKN2A-201ENST00000304494 GAGE12JA6NER3 117 aa17.89■□□□□ 0.45
CDKN2A-201ENST00000304494 GAGE1Q13065 139 aa17.89■□□□□ 0.45
CDKN2A-201ENST00000304494 GAGE4Q13068 117 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms