RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SLX1AQ9BQ83 275 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 DOCK6Q96HP0 2047 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 DAZ2Q13117 558 aaKnown RBP8.16□□□□□ -1.1
CLIP1-201ENST00000302528 DAZ4Q86SG3 579 aaKnown RBP8.16□□□□□ -1.1
CLIP1-201ENST00000302528 DAZ3Q9NR90 486 aaKnown RBP8.16□□□□□ -1.1
CLIP1-201ENST00000302528 C17orf58Q2M2W7 97 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 DEFB136Q30KP8 78 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 FAM110AQ9BQ89 295 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 ZNF747Q9BV97 191 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 CRYGBP07316 175 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 PRR20EP86478 221 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 PRR20CP86479 221 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 PRR20DP86480 221 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 PRR20BP86481 221 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 PRR20AP86496 221 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 A4D1N5 150 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 KIF26BQ2KJY2 2108 aa8.16□□□□□ -1.1
CLIP1-201ENST00000302528 USP17L23D6RBM5 183 aa8.15□□□□□ -1.1
CLIP1-201ENST00000302528 ANKRD39Q53RE8 183 aa8.15□□□□□ -1.1
CLIP1-201ENST00000302528 LINC00311Q8N616 119 aa8.15□□□□□ -1.1
CLIP1-201ENST00000302528 AGPAT4-IT1Q9H0P7 198 aa8.15□□□□□ -1.1
CLIP1-201ENST00000302528 VPREB3Q9UKI3 123 aa8.15□□□□□ -1.1
CLIP1-201ENST00000302528 SDK2Q58EX2 2172 aa8.15□□□□□ -1.1
CLIP1-201ENST00000302528 ZNF726P1Q15940 193 aa8.15□□□□□ -1.1
CLIP1-201ENST00000302528 A0A0J9YXV3 536 aa8.15□□□□□ -1.1
CLIP1-201ENST00000302528 SPRY2O43597 315 aa8.15□□□□□ -1.1
CLIP1-201ENST00000302528 Q6ZVH6 145 aa8.15□□□□□ -1.11
CLIP1-201ENST00000302528 KLK5Q9Y337 293 aaPredicted RBP8.15□□□□□ -1.11
CLIP1-201ENST00000302528 PI4KAP42356 2102 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 DAND5Q8N907 189 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 C17orf77Q96MU5 243 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 IGLV3-9A0A075B6K5 115 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 RBAKDNA6NC62 111 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 DEFB112Q30KQ8 113 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 ZNF491Q8N8L2 437 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 RNF152Q8N8N0 203 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 RPL39LQ96EH5 51 aaKnown RBP8.14□□□□□ -1.11
CLIP1-201ENST00000302528 FOXL2NBQ6ZUU3 175 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 C3orf22Q8N5N4 141 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 FGF23Q9GZV9 251 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-201ENST00000302528 IGHV4-59P01825 116 aa8.14□□□□□ -1.11
CLIP1-201ENST00000302528 GATA1P15976 413 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-201ENST00000302528 K7ENP7 123 aa8.13□□□□□ -1.11
CLIP1-201ENST00000302528 LENEPQ9Y5L5 61 aa8.13□□□□□ -1.11
CLIP1-201ENST00000302528 SPAG11BQ08648 103 aa8.13□□□□□ -1.11
CLIP1-201ENST00000302528 SLURP1P55000 103 aa8.13□□□□□ -1.11
CLIP1-201ENST00000302528 ABCA7Q8IZY2 2146 aa8.13□□□□□ -1.11
CLIP1-201ENST00000302528 NOTCH3Q9UM47 2321 aa8.13□□□□□ -1.11
CLIP1-201ENST00000302528 CXCL5P42830 114 aa8.13□□□□□ -1.11
CLIP1-201ENST00000302528 IGHV2-70P01814 119 aa8.12□□□□□ -1.11
CLIP1-201ENST00000302528 TEN1Q86WV5 123 aa8.12□□□□□ -1.11
CLIP1-201ENST00000302528 RNF138Q8WVD3 245 aa8.12□□□□□ -1.11
CLIP1-201ENST00000302528 CACNA1EQ15878 2313 aa8.12□□□□□ -1.11
CLIP1-201ENST00000302528 DIAPH2-AS1Q14236 149 aa8.12□□□□□ -1.11
CLIP1-201ENST00000302528 MPLKIPQ8TAP9 179 aa8.12□□□□□ -1.11
CLIP1-201ENST00000302528 LGALS9O00182 355 aa8.12□□□□□ -1.11
CLIP1-201ENST00000302528 TRBV10-2A0A0K0K1G8 114 aa8.12□□□□□ -1.11
CLIP1-201ENST00000302528 TMEM256-PLSCR3K7ERE1 68 aa8.12□□□□□ -1.11
CLIP1-201ENST00000302528 KIR2DL5BA0A0G2JN68 375 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 KIR2DL5BA0A0G2JPC4 375 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 Q6ZR03 302 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 KIR2DL5AQ8N109 375 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 HHLA3Q9XRX5 114 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 BPY2O14599 106 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 CACNA1BQ00975 2339 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 IGKV2D-26A0A0A0MRZ7 120 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 LRCOL1A6NCL2 159 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 FREM3P0C091 2139 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 COX7BP24311 80 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
CLIP1-201ENST00000302528 PDE6GP18545 87 aa8.1□□□□□ -1.11
CLIP1-201ENST00000302528 UPK3BQ9BT76 320 aa8.1□□□□□ -1.11
CLIP1-201ENST00000302528 KLK12Q9UKR0 248 aa8.1□□□□□ -1.11
CLIP1-201ENST00000302528 TP53BP1Q12888 1972 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-201ENST00000302528 CLEC2BQ92478 149 aa8.1□□□□□ -1.11
CLIP1-201ENST00000302528 HIGD2AQ9BW72 106 aa8.1□□□□□ -1.11
CLIP1-201ENST00000302528 IGKV2-24A0A0C4DH68 120 aa8.09□□□□□ -1.11
CLIP1-201ENST00000302528 HOXB4P17483 251 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-201ENST00000302528 SCN5AQ14524 2016 aa8.09□□□□□ -1.11
CLIP1-201ENST00000302528 FER1L5A0AVI2 2057 aa8.09□□□□□ -1.11
CLIP1-201ENST00000302528 K7EN84 100 aa8.09□□□□□ -1.11
CLIP1-201ENST00000302528 C17orf82Q86X59 251 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-201ENST00000302528 A0A096LNI7 61 aa8.09□□□□□ -1.11
CLIP1-201ENST00000302528 TRAV23DV6A0A075B6W5 121 aa8.09□□□□□ -1.12
CLIP1-201ENST00000302528 YLPM1P49750 1951 aaKnown RBP8.09□□□□□ -1.12
CLIP1-201ENST00000302528 TRBV7-3A0A075B6L6 115 aa8.08□□□□□ -1.12
CLIP1-201ENST00000302528 MIR7-3HGQ8N6C7 128 aa8.08□□□□□ -1.12
CLIP1-201ENST00000302528 C15orf65H3BRN8 121 aa8.08□□□□□ -1.12
CLIP1-201ENST00000302528 WISP1O95388 367 aa8.08□□□□□ -1.12
CLIP1-201ENST00000302528 GTSF1Q8WW33 167 aa8.08□□□□□ -1.12
CLIP1-201ENST00000302528 KIAA2026Q5HYC2 2103 aa8.08□□□□□ -1.12
CLIP1-201ENST00000302528 FAM240AA0A1B0GVK7 77 aa8.07□□□□□ -1.12
CLIP1-201ENST00000302528 WI2-2373I1.2A0A1W2PRP0 233 aa8.07□□□□□ -1.12
CLIP1-201ENST00000302528 COL6A6A6NMZ7 2263 aa8.07□□□□□ -1.12
CLIP1-201ENST00000302528 DOCK7Q96N67 2140 aa8.07□□□□□ -1.12
CLIP1-201ENST00000302528 DEFB4AO15263 64 aa8.07□□□□□ -1.12
CLIP1-201ENST00000302528 KIR2DL5BQ8NHK3 375 aa8.07□□□□□ -1.12
CLIP1-201ENST00000302528 MLST8Q9BVC4 326 aa8.07□□□□□ -1.12
CLIP1-201ENST00000302528 IGHV2-5P01817 119 aa8.07□□□□□ -1.12
CLIP1-201ENST00000302528 DEFB135Q30KP9 77 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms