RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 RAB31Q13636 194 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 LGALSLQ3ZCW2 172 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-201ENST00000302278 EIF5AL1Q6IS14 154 aaKnown RBP4.16□□□□□ -1.74
ITGB1-201ENST00000302278 EXOC3-AS1Q8N2X6 119 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 PRADC1Q9BSG0 188 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 C20orf85Q9H1P6 137 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 A0A087WWC5 75 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 C7orf66A4D0T2 115 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 DIRC3C9JPN6 131 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 SIX6O95475 246 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 LINC01600Q96MT4 127 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 Q9HAA7 133 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 MED9Q9NWA0 146 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 TIMM9Q9Y5J7 89 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 GGTLC3B5MD39 225 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 TYMSP04818 313 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 MGST1P10620 155 aaKnown RBP4.15□□□□□ -1.74
ITGB1-201ENST00000302278 VAMP1P23763 118 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 PEA15Q15121 130 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 OR10J3Q5JRS4 329 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 MIC13Q5XKP0 118 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 DGAT2L7PQ6IED9 249 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 TMUB2Q71RG4 321 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 SFT2D1Q8WV19 159 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 ANAPC16Q96DE5 110 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 RNF185Q96GF1 192 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 LINC00479Q96M42 142 aa4.15□□□□□ -1.74
ITGB1-201ENST00000302278 NDUFB6O95139 128 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 IGHV3-30P01768 117 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 IGHV3-33P01772 117 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 MBPP02686 304 aaPredicted RBP4.15□□□□□ -1.75
ITGB1-201ENST00000302278 IGHV3-30-3P0DP02 117 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 IGHV3-30-5P0DP03 117 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 A0A0D9SG52 128 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 IL15RAQ13261 267 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 ATP6V1FQ16864 119 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 C4orf48Q5BLP8 95 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 NIT1Q86X76 327 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 MITD1Q8WV92 249 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 BAALCQ8WXS3 180 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 CBY1Q9Y3M2 126 aa4.15□□□□□ -1.75
ITGB1-201ENST00000302278 PYYP10082 97 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 RPL19P84098 196 aaKnown RBP4.14□□□□□ -1.75
ITGB1-201ENST00000302278 TMEM183BQ1AE95 376 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 FAM159AQ6UWV7 190 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 TMEM183AQ8IXX5 376 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 KCNS1Q96KK3 526 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 ATP5SQ99766 215 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 UQCC1Q9NVA1 299 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 RBFOX3A6NFN3 312 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 TSTD3H0UI37 97 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 RAB5CP51148 216 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 KRTAP10-8P60410 259 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 UQCC3Q6UW78 93 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 C9orf163Q8N9P6 203 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 SMCO4Q9NRQ5 59 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 LYRM2Q9NU23 88 aaPredicted RBP4.14□□□□□ -1.75
ITGB1-201ENST00000302278 SNRPCP09234 159 aaKnown RBP4.14□□□□□ -1.75
ITGB1-201ENST00000302278 OR10J4P0C629 311 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 NBEAP1P0C6P0 100 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 DNLZQ5SXM8 178 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 Q8N3U1 123 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 CYB561D1Q8N8Q1 229 aa4.14□□□□□ -1.75
ITGB1-201ENST00000302278 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-201ENST00000302278 TRAV21A0A0B4J279 112 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 M0R036 132 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 SULT1A1P50225 295 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 Q0VG73 95 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 ZFP82Q8N141 532 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 NHLRC2Q8NBF2 726 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 C2orf50Q96LR7 162 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 OR51M1Q9H341 326 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 RPH3ALQ9UNE2 315 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 MPC2O95563 127 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 RAB4BP61018 213 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 CNBPP62633 177 aaKnown RBP4.13□□□□□ -1.75
ITGB1-201ENST00000302278 DPPA3Q6W0C5 159 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 OR11H4Q8NGC9 324 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 Q8TAT8 98 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 PHYHIPLQ96FC7 376 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 NPCDR1Q9BY65 106 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 KRTAP3-3Q9BYR6 98 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 KRTAP3-2Q9BYR7 98 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 PARLQ9H300 379 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 SDF2L1Q9HCN8 221 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 HMSDA8MTL9 139 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 LINC00587B1AMM8 73 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 BTCP35070 178 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 FGF8P55075 233 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-201ENST00000302278 SNRPEP62304 92 aaKnown RBP4.13□□□□□ -1.75
ITGB1-201ENST00000302278 ELOBQ15370 118 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 IAH1Q2TAA2 248 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-201ENST00000302278 LINC01620Q4KN68 170 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 KRTAP26-1Q6PEX3 210 aa4.13□□□□□ -1.75
ITGB1-201ENST00000302278 DAZ4Q86SG3 579 aaKnown RBP4.13□□□□□ -1.75
ITGB1-201ENST00000302278 DAZ3Q9NR90 486 aaKnown RBP4.13□□□□□ -1.75
ITGB1-201ENST00000302278 MUC21Q5SSG8 566 aa4.12□□□□□ -1.75
ITGB1-201ENST00000302278 SDIM1Q6ZPB5 146 aa4.12□□□□□ -1.75
ITGB1-201ENST00000302278 OR10G7Q8NGN6 311 aa4.12□□□□□ -1.75
ITGB1-201ENST00000302278 TVP23CQ96ET8 276 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms