RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 PET117Q6UWS5 81 aa11.87□□□□□ -0.51
CHAF1A-201ENST00000301280 GAGE12BA1L429 117 aa11.87□□□□□ -0.51
CHAF1A-201ENST00000301280 BBC3Q96PG8 261 aaPredicted RBP11.87□□□□□ -0.51
CHAF1A-201ENST00000301280 SLC50A1Q9BRV3 221 aa11.87□□□□□ -0.51
CHAF1A-201ENST00000301280 U3KQK5 164 aa11.87□□□□□ -0.51
CHAF1A-201ENST00000301280 JMJD8Q96S16 334 aa11.86□□□□□ -0.51
CHAF1A-201ENST00000301280 KNCNA6PVL3 124 aa11.86□□□□□ -0.51
CHAF1A-201ENST00000301280 Q6AWC8 147 aa11.86□□□□□ -0.51
CHAF1A-201ENST00000301280 COX8AP10176 69 aa11.86□□□□□ -0.51
CHAF1A-201ENST00000301280 SMIM17P0DL12 118 aa11.85□□□□□ -0.51
CHAF1A-201ENST00000301280 COX6B1P14854 86 aa11.85□□□□□ -0.51
CHAF1A-201ENST00000301280 C18orf65Q6ZTR6 163 aa11.85□□□□□ -0.51
CHAF1A-201ENST00000301280 MTURNQ8N3F0 131 aa11.85□□□□□ -0.51
CHAF1A-201ENST00000301280 CD5LO43866 347 aa11.85□□□□□ -0.51
CHAF1A-201ENST00000301280 C12orf54Q6X4T0 127 aa11.85□□□□□ -0.51
CHAF1A-201ENST00000301280 IGHV3-64A0A075B6Q5 118 aa11.85□□□□□ -0.51
CHAF1A-201ENST00000301280 B4DSR2 109 aa11.85□□□□□ -0.51
CHAF1A-201ENST00000301280 H3BUT2 72 aa11.85□□□□□ -0.51
CHAF1A-201ENST00000301280 COTL1Q14019 142 aa11.84□□□□□ -0.51
CHAF1A-201ENST00000301280 MYOZ3Q8TDC0 251 aa11.84□□□□□ -0.51
CHAF1A-201ENST00000301280 FAM159AQ6UWV7 190 aa11.84□□□□□ -0.51
CHAF1A-201ENST00000301280 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
CHAF1A-201ENST00000301280 VPS25Q9BRG1 176 aa11.83□□□□□ -0.52
CHAF1A-201ENST00000301280 K7ERJ3 54 aa11.83□□□□□ -0.52
CHAF1A-201ENST00000301280 ASIPP42127 132 aa11.83□□□□□ -0.52
CHAF1A-201ENST00000301280 MS4A6AQ9H2W1 248 aa11.83□□□□□ -0.52
CHAF1A-201ENST00000301280 MRPL35Q9NZE8 188 aaKnown RBP11.83□□□□□ -0.52
CHAF1A-201ENST00000301280 TMEM8BA6NDV4 472 aa11.82□□□□□ -0.52
CHAF1A-201ENST00000301280 RNF185Q96GF1 192 aa11.82□□□□□ -0.52
CHAF1A-201ENST00000301280 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
CHAF1A-201ENST00000301280 LINC01546A6NGU7 62 aa11.82□□□□□ -0.52
CHAF1A-201ENST00000301280 HOXA3O43365 443 aaPredicted RBP11.81□□□□□ -0.52
CHAF1A-201ENST00000301280 ZNF56Q15929 161 aa11.81□□□□□ -0.52
CHAF1A-201ENST00000301280 TEP1Q99973 2627 aaKnown RBP11.81□□□□□ -0.52
CHAF1A-201ENST00000301280 IGLC6P0CF74 106 aa11.81□□□□□ -0.52
CHAF1A-201ENST00000301280 TMEM97Q5BJF2 176 aa11.81□□□□□ -0.52
CHAF1A-201ENST00000301280 UFSP1Q6NVU6 142 aa11.81□□□□□ -0.52
CHAF1A-201ENST00000301280 CNFNQ9BYD5 112 aa11.81□□□□□ -0.52
CHAF1A-201ENST00000301280 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
CHAF1A-201ENST00000301280 UBR5O95071 2799 aaPredicted RBP11.81□□□□□ -0.52
CHAF1A-201ENST00000301280 C19orf54Q5BKX5 351 aa11.8□□□□□ -0.52
CHAF1A-201ENST00000301280 SCGB3A1Q96QR1 104 aa11.8□□□□□ -0.52
CHAF1A-201ENST00000301280 PEF1Q9UBV8 284 aaKnown RBP11.8□□□□□ -0.52
CHAF1A-201ENST00000301280 NBPF19A0A087WUL8 3843 aa11.8□□□□□ -0.52
CHAF1A-201ENST00000301280 ATRQ13535 2644 aa11.8□□□□□ -0.52
CHAF1A-201ENST00000301280 CD300EQ496F6 205 aaPredicted RBP11.79□□□□□ -0.52
CHAF1A-201ENST00000301280 CRIP2P52943 208 aaPredicted RBP11.79□□□□□ -0.52
CHAF1A-201ENST00000301280 SLURP1P55000 103 aa11.79□□□□□ -0.52
CHAF1A-201ENST00000301280 RIPPLY3P57055 190 aa11.79□□□□□ -0.52
CHAF1A-201ENST00000301280 ATP6V0BQ99437 205 aa11.79□□□□□ -0.52
CHAF1A-201ENST00000301280 CSTL1Q9H114 145 aa11.79□□□□□ -0.52
CHAF1A-201ENST00000301280 SETXQ7Z333 2677 aaKnown RBP11.79□□□□□ -0.52
CHAF1A-201ENST00000301280 TRAV21A0A0B4J279 112 aa11.78□□□□□ -0.52
CHAF1A-201ENST00000301280 DPF1Q92782 380 aa11.78□□□□□ -0.52
CHAF1A-201ENST00000301280 NHP2Q9NX24 153 aaKnown RBP11.78□□□□□ -0.52
CHAF1A-201ENST00000301280 RNASE13Q5GAN3 156 aaKnown RBP11.78□□□□□ -0.52
CHAF1A-201ENST00000301280 C9orf139Q6ZV77 190 aa11.78□□□□□ -0.52
CHAF1A-201ENST00000301280 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
CHAF1A-201ENST00000301280 ADAMTSL5Q6ZMM2 481 aa11.78□□□□□ -0.52
CHAF1A-201ENST00000301280 A0A0G2JLM5 398 aa11.77□□□□□ -0.52
CHAF1A-201ENST00000301280 RBAKDNA6NC62 111 aa11.77□□□□□ -0.52
CHAF1A-201ENST00000301280 GPHB5Q86YW7 130 aa11.77□□□□□ -0.52
CHAF1A-201ENST00000301280 Q96MF0 132 aa11.77□□□□□ -0.52
CHAF1A-201ENST00000301280 MDFICQ9P1T7 246 aa11.77□□□□□ -0.52
CHAF1A-201ENST00000301280 FAM223BA6NKX1 122 aa11.77□□□□□ -0.53
CHAF1A-201ENST00000301280 RPL39P62891 51 aaKnown RBP11.77□□□□□ -0.53
CHAF1A-201ENST00000301280 FAM223AQ8IWN6 122 aa11.77□□□□□ -0.53
CHAF1A-201ENST00000301280 IGHV7-4-1A0A0J9YVY3 117 aa11.76□□□□□ -0.53
CHAF1A-201ENST00000301280 BOD1L2Q8IYS8 172 aa11.76□□□□□ -0.53
CHAF1A-201ENST00000301280 OPRPNQ99935 248 aaPredicted RBP11.76□□□□□ -0.53
CHAF1A-201ENST00000301280 IGHG2P01859 326 aa11.76□□□□□ -0.53
CHAF1A-201ENST00000301280 SRSF1Q07955 248 aaKnown RBP eCLIP11.76□□□□□ -0.535e-9■■■■■ 27.7
CHAF1A-201ENST00000301280 LAGE3Q14657 143 aa11.76□□□□□ -0.53
CHAF1A-201ENST00000301280 SCGB1D4Q6XE38 83 aa11.76□□□□□ -0.53
CHAF1A-201ENST00000301280 U3KQE9 123 aa11.76□□□□□ -0.53
CHAF1A-201ENST00000301280 IGHV4OR15-8A0A075B7B6 117 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 A0A087WW49 117 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 IGHV3-16A0A0C4DH30 117 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 GAGE10A6NGK3 116 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 NDUFA4O00483 81 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 IGKCP01834 107 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 APRG1Q8IVJ8 170 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 ZFAND2AQ8N6M9 145 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 A6NDX4 124 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 BRI3O95415 125 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 Q5PR19 223 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 DEFB131AP59861 70 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 NXT2Q9NPJ8 142 aaKnown RBP11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 SMPXQ9UHP9 88 aa11.75□□□□□ -0.53
CHAF1A-201ENST00000301280 C9orf118A6NHY6 69 aa11.74□□□□□ -0.53
CHAF1A-201ENST00000301280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.74□□□□□ -0.53
CHAF1A-201ENST00000301280 SVIPQ8NHG7 77 aa11.74□□□□□ -0.53
CHAF1A-201ENST00000301280 UBE2E2Q96LR5 201 aa11.74□□□□□ -0.53
CHAF1A-201ENST00000301280 CYSLTR1Q9Y271 337 aa11.74□□□□□ -0.53
CHAF1A-201ENST00000301280 MUC4Q99102 2169 aa11.74□□□□□ -0.53
CHAF1A-201ENST00000301280 H7C2G1 150 aa11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 RPL24P83731 157 aaKnown RBP11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 TMEM170BQ5T4T1 132 aa11.73□□□□□ -0.53
CHAF1A-201ENST00000301280 HIST1H4GQ99525 98 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms