RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 USMG5Q96IX5 58 aa16.64■□□□□ 0.26
TPM4-201ENST00000300933 NHP2Q9NX24 153 aaKnown RBP16.64■□□□□ 0.26
TPM4-201ENST00000300933 NDUFA4O00483 81 aa16.64■□□□□ 0.25
TPM4-201ENST00000300933 GATA3P23771 443 aa16.64■□□□□ 0.25
TPM4-201ENST00000300933 FLNAP21333 2647 aaKnown RBP16.64■□□□□ 0.25
TPM4-201ENST00000300933 PRSS1P07477 247 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 COX8CQ7Z4L0 72 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 IGKV3D-20A0A0C4DH25 116 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 Q5PR19 223 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 GTSCR1Q86UQ5 136 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 CHAC1Q9BUX1 264 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 SMIM17P0DL12 118 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 IGHV4-31P0DP07 118 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 EVI2AP22794 236 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 LEPP41159 167 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 PRR9Q5T870 116 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 HIST2H2BDQ6DRA6 164 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 TMEM190Q8WZ59 177 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 RHPN1-AS1Q9BWJ2 59 aa16.63■□□□□ 0.25
TPM4-201ENST00000300933 WFDC12Q8WWY7 111 aa16.62■□□□□ 0.25
TPM4-201ENST00000300933 HELZ2Q9BYK8 2649 aaKnown RBP16.62■□□□□ 0.25
TPM4-201ENST00000300933 ITPR2Q14571 2701 aa16.61■□□□□ 0.25
TPM4-201ENST00000300933 CFHR3Q02985 330 aa16.61■□□□□ 0.25
TPM4-201ENST00000300933 Q96MF0 132 aa16.61■□□□□ 0.25
TPM4-201ENST00000300933 HHLA3Q9XRX5 114 aa16.61■□□□□ 0.25
TPM4-201ENST00000300933 IGLC6P0CF74 106 aa16.6■□□□□ 0.25
TPM4-201ENST00000300933 WFDC2Q14508 124 aa16.6■□□□□ 0.25
TPM4-201ENST00000300933 MTURNQ8N3F0 131 aa16.6■□□□□ 0.25
TPM4-201ENST00000300933 TSSC4Q9Y5U2 329 aaPredicted RBP16.6■□□□□ 0.25
TPM4-201ENST00000300933 ODF1Q14990 250 aa16.59■□□□□ 0.25
TPM4-201ENST00000300933 DEFB113Q30KQ7 82 aa16.59■□□□□ 0.25
TPM4-201ENST00000300933 PSMG3-AS1Q96PY0 264 aa16.59■□□□□ 0.25
TPM4-201ENST00000300933 TRBV25-1A0A075B6N4 114 aa16.59■□□□□ 0.25
TPM4-201ENST00000300933 RBAKDNA6NC62 111 aa16.59■□□□□ 0.25
TPM4-201ENST00000300933 HOXA3O43365 443 aaPredicted RBP16.58■□□□□ 0.25
TPM4-201ENST00000300933 GATA1P15976 413 aaPredicted RBP16.58■□□□□ 0.25
TPM4-201ENST00000300933 SIGMAR1Q99720 223 aa16.58■□□□□ 0.25
TPM4-201ENST00000300933 FOXC2Q99958 501 aa16.58■□□□□ 0.25
TPM4-201ENST00000300933 MAP1LC3AQ9H492 121 aa16.58■□□□□ 0.24
TPM4-201ENST00000300933 H3BUA1 57 aa16.57■□□□□ 0.24
TPM4-201ENST00000300933 PSMB8P28062 276 aa16.57■□□□□ 0.24
TPM4-201ENST00000300933 ZC2HC1BQ5TFG8 222 aa16.57■□□□□ 0.24
TPM4-201ENST00000300933 SH2D6Q7Z4S9 175 aa16.57■□□□□ 0.24
TPM4-201ENST00000300933 MTORP42345 2549 aa16.56■□□□□ 0.24
TPM4-201ENST00000300933 IGKCP01834 107 aa16.56■□□□□ 0.24
TPM4-201ENST00000300933 C9orf47Q6ZRZ4 202 aa16.56■□□□□ 0.24
TPM4-201ENST00000300933 PHLDA1Q8WV24 401 aaPredicted RBP16.56■□□□□ 0.24
TPM4-201ENST00000300933 TMEM160Q9NX00 188 aa16.56■□□□□ 0.24
TPM4-201ENST00000300933 AGRNO00468 2067 aa16.56■□□□□ 0.24
TPM4-201ENST00000300933 IGHV7-4-1A0A0J9YVY3 117 aa16.56■□□□□ 0.24
TPM4-201ENST00000300933 H3BMG7 143 aa16.56■□□□□ 0.24
TPM4-201ENST00000300933 ATP6V0BQ99437 205 aa16.56■□□□□ 0.24
TPM4-201ENST00000300933 DAZ1Q9NQZ3 744 aaKnown RBP16.56■□□□□ 0.24
TPM4-201ENST00000300933 LINC01559Q495D7 138 aa16.55■□□□□ 0.24
TPM4-201ENST00000300933 AMTNQ6UX39 209 aa16.55■□□□□ 0.24
TPM4-201ENST00000300933 C9orf139Q6ZV77 190 aa16.55■□□□□ 0.24
TPM4-201ENST00000300933 SOCS3O14543 225 aa16.55■□□□□ 0.24
TPM4-201ENST00000300933 RNF185Q96GF1 192 aa16.55■□□□□ 0.24
TPM4-201ENST00000300933 CEND1Q8N111 149 aa16.54■□□□□ 0.24
TPM4-201ENST00000300933 GAGE12HA6NDE8 117 aa16.54■□□□□ 0.24
TPM4-201ENST00000300933 TMEM158Q8WZ71 300 aa16.54■□□□□ 0.24
TPM4-201ENST00000300933 TNFRSF6BO95407 300 aa16.53■□□□□ 0.24
TPM4-201ENST00000300933 ETDBQ3ZM63 59 aa16.53■□□□□ 0.24
TPM4-201ENST00000300933 HIGD1BQ9P298 99 aa16.53■□□□□ 0.24
TPM4-201ENST00000300933 J3QLI3 93 aa16.53■□□□□ 0.24
TPM4-201ENST00000300933 FCER1GP30273 86 aa16.53■□□□□ 0.24
TPM4-201ENST00000300933 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.53■□□□□ 0.24
TPM4-201ENST00000300933 MAPKAPK5-AS1Q8N8E1 139 aa16.53■□□□□ 0.24
TPM4-201ENST00000300933 ZMAT4Q9H898 229 aa16.53■□□□□ 0.24
TPM4-201ENST00000300933 SPANXB1Q9NS25 103 aaPredicted RBP16.53■□□□□ 0.24
TPM4-201ENST00000300933 SMPXQ9UHP9 88 aa16.53■□□□□ 0.24
TPM4-201ENST00000300933 VPREB3Q9UKI3 123 aa16.53■□□□□ 0.24
TPM4-201ENST00000300933 CD300EQ496F6 205 aaPredicted RBP16.52■□□□□ 0.24
TPM4-201ENST00000300933 OR10J6PQ8NGY7 276 aa16.52■□□□□ 0.24
TPM4-201ENST00000300933 WNK1Q9H4A3 2382 aa16.52■□□□□ 0.24
TPM4-201ENST00000300933 IGLL5B9A064 214 aa16.52■□□□□ 0.23
TPM4-201ENST00000300933 H3BVH4 76 aa16.52■□□□□ 0.23
TPM4-201ENST00000300933 BRI3O95415 125 aa16.52■□□□□ 0.23
TPM4-201ENST00000300933 MRPL53Q96EL3 112 aaKnown RBP16.52■□□□□ 0.23
TPM4-201ENST00000300933 ZNF479Q96JC4 524 aa16.52■□□□□ 0.23
TPM4-201ENST00000300933 RNASE4P34096 147 aaKnown RBP16.51■□□□□ 0.23
TPM4-201ENST00000300933 Q6YL49 198 aa16.51■□□□□ 0.23
TPM4-201ENST00000300933 TRAV26-2A0A0B4J265 109 aa16.51■□□□□ 0.23
TPM4-201ENST00000300933 DPM2O94777 84 aa16.51■□□□□ 0.23
TPM4-201ENST00000300933 SYNJ2BPP57105 145 aa16.51■□□□□ 0.23
TPM4-201ENST00000300933 C18orf65Q6ZTR6 163 aa16.51■□□□□ 0.23
TPM4-201ENST00000300933 FOXI2Q6ZQN5 318 aa16.5■□□□□ 0.23
TPM4-201ENST00000300933 ZFAND2AQ8N6M9 145 aa16.5■□□□□ 0.23
TPM4-201ENST00000300933 UFC1Q9Y3C8 167 aa16.5■□□□□ 0.23
TPM4-201ENST00000300933 AKAP9Q99996 3911 aa16.5■□□□□ 0.23
TPM4-201ENST00000300933 DEFB136Q30KP8 78 aa16.5■□□□□ 0.23
TPM4-201ENST00000300933 WFDC11Q8NEX6 87 aa16.5■□□□□ 0.23
TPM4-201ENST00000300933 MRPL35Q9NZE8 188 aaKnown RBP16.5■□□□□ 0.23
TPM4-201ENST00000300933 E9PLD3 99 aa16.49■□□□□ 0.23
TPM4-201ENST00000300933 IGKV3-20P01619 116 aa16.49■□□□□ 0.23
TPM4-201ENST00000300933 TM2D2Q9BX73 214 aa16.49■□□□□ 0.23
TPM4-201ENST00000300933 KRTAP1-3Q8IUG1 177 aa16.49■□□□□ 0.23
TPM4-201ENST00000300933 SPAG8Q99932 426 aaPredicted RBP16.49■□□□□ 0.23
TPM4-201ENST00000300933 ZNF702PQ9H963 129 aa16.49■□□□□ 0.23
TPM4-201ENST00000300933 INSL3P51460 131 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms