RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 URB1-AS1Q96HZ7 61 aa10.32□□□□□ -0.76
CASC4-201ENST00000299957 SPOCK3Q9BQ16 436 aa10.32□□□□□ -0.76
CASC4-201ENST00000299957 JPT2Q9H910 190 aa10.32□□□□□ -0.76
CASC4-201ENST00000299957 RNASE1P07998 156 aaKnown RBP10.32□□□□□ -0.76
CASC4-201ENST00000299957 HOXB4P17483 251 aaPredicted RBP10.32□□□□□ -0.76
CASC4-201ENST00000299957 WFDC2Q14508 124 aa10.32□□□□□ -0.76
CASC4-201ENST00000299957 TCF15Q12870 199 aa10.31□□□□□ -0.76
CASC4-201ENST00000299957 HIST2H2BDQ6DRA6 164 aa10.31□□□□□ -0.76
CASC4-201ENST00000299957 C9orf139Q6ZV77 190 aa10.31□□□□□ -0.76
CASC4-201ENST00000299957 Q8N8P6 123 aa10.31□□□□□ -0.76
CASC4-201ENST00000299957 FAM110DQ8TAY7 271 aaPredicted RBP10.31□□□□□ -0.76
CASC4-201ENST00000299957 UBE2E2Q96LR5 201 aa10.31□□□□□ -0.76
CASC4-201ENST00000299957 IGHV3-38A0A0C4DH36 116 aa10.31□□□□□ -0.76
CASC4-201ENST00000299957 K7EP34 96 aa10.31□□□□□ -0.76
CASC4-201ENST00000299957 CD28P10747 220 aa10.31□□□□□ -0.76
CASC4-201ENST00000299957 IGKV2D-26A0A0A0MRZ7 120 aa10.3□□□□□ -0.76
CASC4-201ENST00000299957 ZNF292O60281 2723 aa10.3□□□□□ -0.76
CASC4-201ENST00000299957 ADAMTS20P59510 1910 aa10.3□□□□□ -0.76
CASC4-201ENST00000299957 BUB3O43684 328 aa10.3□□□□□ -0.76
CASC4-201ENST00000299957 CDSNQ15517 529 aa10.3□□□□□ -0.76
CASC4-201ENST00000299957 UBE2E1P51965 193 aa10.3□□□□□ -0.76
CASC4-201ENST00000299957 Q8N9W7 124 aa10.3□□□□□ -0.76
CASC4-201ENST00000299957 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
CASC4-201ENST00000299957 PTPRBP23467 1997 aa10.3□□□□□ -0.76
CASC4-201ENST00000299957 TRBV7-1A0A0A6YYK4 115 aa10.29□□□□□ -0.76
CASC4-201ENST00000299957 UNQ9165/PRO28630Q6UXU0 137 aa10.29□□□□□ -0.76
CASC4-201ENST00000299957 SRSF8Q9BRL6 282 aaKnown RBP10.29□□□□□ -0.76
CASC4-201ENST00000299957 SDHAF1A6NFY7 115 aa10.29□□□□□ -0.76
CASC4-201ENST00000299957 PLNP26678 52 aa10.29□□□□□ -0.76
CASC4-201ENST00000299957 OVOL1O14753 267 aa10.29□□□□□ -0.76
CASC4-201ENST00000299957 RPL39P62891 51 aaKnown RBP10.29□□□□□ -0.76
CASC4-201ENST00000299957 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
CASC4-201ENST00000299957 IGLV2-11P01706 119 aa10.28□□□□□ -0.76
CASC4-201ENST00000299957 COX6CP09669 75 aa10.28□□□□□ -0.76
CASC4-201ENST00000299957 IGHV4-38-2P0DP08 117 aa10.28□□□□□ -0.76
CASC4-201ENST00000299957 SMPXQ9UHP9 88 aa10.28□□□□□ -0.76
CASC4-201ENST00000299957 DUSP14O95147 198 aaKnown RBP10.27□□□□□ -0.77
CASC4-201ENST00000299957 MYCNOSP40205 109 aa10.27□□□□□ -0.77
CASC4-201ENST00000299957 DEFB136Q30KP8 78 aa10.27□□□□□ -0.77
CASC4-201ENST00000299957 PIP4P2Q8N4L2 257 aa10.27□□□□□ -0.77
CASC4-201ENST00000299957 C12orf74Q32Q52 190 aa10.27□□□□□ -0.77
CASC4-201ENST00000299957 C9JAW5 83 aa10.26□□□□□ -0.77
CASC4-201ENST00000299957 F8VRH5 84 aa10.26□□□□□ -0.77
CASC4-201ENST00000299957 CDKN1BP46527 198 aa10.26□□□□□ -0.77
CASC4-201ENST00000299957 OR11H6Q8NGC7 330 aa10.26□□□□□ -0.77
CASC4-201ENST00000299957 PPP1R17O96001 155 aa10.26□□□□□ -0.77
CASC4-201ENST00000299957 DEFB131AP59861 70 aa10.26□□□□□ -0.77
CASC4-201ENST00000299957 LINC00574Q9H8X3 128 aa10.26□□□□□ -0.77
CASC4-201ENST00000299957 DAZ1Q9NQZ3 744 aaKnown RBP10.26□□□□□ -0.77
CASC4-201ENST00000299957 NDUFS8O00217 210 aa10.26□□□□□ -0.77
CASC4-201ENST00000299957 CEND1Q8N111 149 aa10.26□□□□□ -0.77
CASC4-201ENST00000299957 OPRPNQ99935 248 aaPredicted RBP10.26□□□□□ -0.77
CASC4-201ENST00000299957 MSRB2Q9Y3D2 182 aa10.26□□□□□ -0.77
CASC4-201ENST00000299957 OOSP1A8MZH6 123 aa10.25□□□□□ -0.77
CASC4-201ENST00000299957 COL5A1P20908 1838 aaPredicted RBP10.25□□□□□ -0.77
CASC4-201ENST00000299957 CENPVL3A0A0U1RRI6 287 aa10.25□□□□□ -0.77
CASC4-201ENST00000299957 PTH2Q96A98 100 aa10.25□□□□□ -0.77
CASC4-201ENST00000299957 IGHV4-61A0A0C4DH41 118 aa10.25□□□□□ -0.77
CASC4-201ENST00000299957 WI2-2373I1.2A0A1W2PRP0 233 aa10.25□□□□□ -0.77
CASC4-201ENST00000299957 AZU1P20160 251 aa10.25□□□□□ -0.77
CASC4-201ENST00000299957 ADORA2A-AS1P86434 159 aa10.25□□□□□ -0.77
CASC4-201ENST00000299957 MYMXA0A1B0GTQ4 84 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 A8MWV9 139 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 ODF1Q14990 250 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 C8orf31Q8N9H6 132 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 OR13C6PQ8NH95 151 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 C11orf68Q9H3H3 251 aaKnown RBP10.24□□□□□ -0.77
CASC4-201ENST00000299957 TRAV13-1A0A0B4J241 112 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 VCYO14598 125 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 FGF6P10767 208 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 RBX1P62877 108 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 C19orf54Q5BKX5 351 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 TTC32Q5I0X7 151 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 BOD1L2Q8IYS8 172 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 ERG28Q9UKR5 140 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 XCL2Q9UBD3 114 aa10.24□□□□□ -0.77
CASC4-201ENST00000299957 DMDP11532 3685 aa10.23□□□□□ -0.77
CASC4-201ENST00000299957 IGHV1-69DA0A0B4J2H0 117 aa10.23□□□□□ -0.77
CASC4-201ENST00000299957 INS-IGF2F8WCM5 200 aa10.23□□□□□ -0.77
CASC4-201ENST00000299957 IGHV1-69P01742 117 aa10.23□□□□□ -0.77
CASC4-201ENST00000299957 DLX4Q92988 240 aaPredicted RBP10.23□□□□□ -0.77
CASC4-201ENST00000299957 ZFHX4Q86UP3 3567 aa10.23□□□□□ -0.77
CASC4-201ENST00000299957 ANKRD17O75179 2603 aaKnown RBP10.23□□□□□ -0.77
CASC4-201ENST00000299957 CFHR3Q02985 330 aa10.23□□□□□ -0.77
CASC4-201ENST00000299957 A0A087WX48 190 aa10.23□□□□□ -0.77
CASC4-201ENST00000299957 DMXL1Q9Y485 3027 aa10.22□□□□□ -0.77
CASC4-201ENST00000299957 LRBAP50851 2863 aa10.22□□□□□ -0.77
CASC4-201ENST00000299957 RRN3P1Q2M238 152 aa10.22□□□□□ -0.77
CASC4-201ENST00000299957 UBE2L6O14933 153 aa10.22□□□□□ -0.77
CASC4-201ENST00000299957 COX6B1P14854 86 aa10.22□□□□□ -0.77
CASC4-201ENST00000299957 SMAD5-AS1Q9Y6J3 95 aa10.22□□□□□ -0.77
CASC4-201ENST00000299957 TMEM262E9PQX1 116 aa10.22□□□□□ -0.77
CASC4-201ENST00000299957 SNCGO76070 127 aa10.22□□□□□ -0.77
CASC4-201ENST00000299957 IGHV4-59P01825 116 aa10.22□□□□□ -0.77
CASC4-201ENST00000299957 SPINK8P0C7L1 97 aa10.22□□□□□ -0.77
CASC4-201ENST00000299957 TRGV2A0A075B6R0 118 aa10.21□□□□□ -0.77
CASC4-201ENST00000299957 MAPKAPK5-AS1Q8N8E1 139 aa10.21□□□□□ -0.77
CASC4-201ENST00000299957 RNF223E7ERA6 249 aa10.21□□□□□ -0.78
CASC4-201ENST00000299957 C2orf91Q6ZV80 131 aa10.21□□□□□ -0.78
CASC4-201ENST00000299957 NPBQ8NG41 125 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 291.9 ms