RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TDRG1Q3Y452 100 aa15.24■□□□□ 0.03
SMCO4-201ENST00000298966 DNLZQ5SXM8 178 aa15.24■□□□□ 0.03
SMCO4-201ENST00000298966 GFI1BQ5VTD9 330 aa15.24■□□□□ 0.03
SMCO4-201ENST00000298966 A0A1B0GXF2 115 aa15.23■□□□□ 0.03
SMCO4-201ENST00000298966 F2Z2F3 143 aa15.23■□□□□ 0.03
SMCO4-201ENST00000298966 ZNF324O75467 553 aaPredicted RBP15.23■□□□□ 0.03
SMCO4-201ENST00000298966 S100A8P05109 93 aa15.23■□□□□ 0.03
SMCO4-201ENST00000298966 GZMBP10144 247 aa15.23■□□□□ 0.03
SMCO4-201ENST00000298966 FAM159AQ6UWV7 190 aa15.23■□□□□ 0.03
SMCO4-201ENST00000298966 C1QTNF4Q9BXJ3 329 aa15.23■□□□□ 0.03
SMCO4-201ENST00000298966 IGKV3D-20A0A0C4DH25 116 aa15.22■□□□□ 0.03
SMCO4-201ENST00000298966 J3KRW8 73 aa15.22■□□□□ 0.03
SMCO4-201ENST00000298966 M0R2Z0 102 aa15.22■□□□□ 0.03
SMCO4-201ENST00000298966 UBE2CO00762 179 aa15.22■□□□□ 0.03
SMCO4-201ENST00000298966 INSP01308 110 aa15.22■□□□□ 0.03
SMCO4-201ENST00000298966 IGLC6P0CF74 106 aa15.22■□□□□ 0.03
SMCO4-201ENST00000298966 CTRLP40313 264 aa15.22■□□□□ 0.03
SMCO4-201ENST00000298966 ZNF124Q15973 351 aa15.22■□□□□ 0.03
SMCO4-201ENST00000298966 FER1L6-AS1Q8NA97 138 aa15.22■□□□□ 0.03
SMCO4-201ENST00000298966 PGLYRP4Q96LB8 373 aa15.22■□□□□ 0.03
SMCO4-201ENST00000298966 MRPL54Q6P161 138 aaKnown RBP15.21■□□□□ 0.03
SMCO4-201ENST00000298966 TMEM256Q8N2U0 113 aa15.21■□□□□ 0.03
SMCO4-201ENST00000298966 LINC00467Q9BRT7 94 aa15.21■□□□□ 0.03
SMCO4-201ENST00000298966 C11orf21Q9P2W6 132 aa15.21■□□□□ 0.03
SMCO4-201ENST00000298966 TRAPPC1Q9Y5R8 145 aa15.21■□□□□ 0.03
SMCO4-201ENST00000298966 TMSB15BA0A087X1C1 80 aa15.2■□□□□ 0.02
SMCO4-201ENST00000298966 TRAV12-3A0A0B4J271 114 aa15.2■□□□□ 0.02
SMCO4-201ENST00000298966 A0A1B0GUT8 65 aa15.2■□□□□ 0.02
SMCO4-201ENST00000298966 SPINK4O60575 86 aa15.2■□□□□ 0.02
SMCO4-201ENST00000298966 HLA-DQA1P01909 254 aa15.2■□□□□ 0.02
SMCO4-201ENST00000298966 HBBP68871 147 aa15.2■□□□□ 0.02
SMCO4-201ENST00000298966 RIGQ13278 110 aa15.2■□□□□ 0.02
SMCO4-201ENST00000298966 TMEM136Q6ZRR5 245 aa15.2■□□□□ 0.02
SMCO4-201ENST00000298966 ZNF575Q86XF7 245 aa15.2■□□□□ 0.02
SMCO4-201ENST00000298966 CRXO43186 299 aaPredicted RBP15.19■□□□□ 0.02
SMCO4-201ENST00000298966 OR5AL1P0C617 328 aa15.19■□□□□ 0.02
SMCO4-201ENST00000298966 ASIPP42127 132 aa15.19■□□□□ 0.02
SMCO4-201ENST00000298966 ANXA2RQ3ZCQ2 193 aa15.19■□□□□ 0.02
SMCO4-201ENST00000298966 RNF183Q96D59 192 aa15.19■□□□□ 0.02
SMCO4-201ENST00000298966 CNFNQ9BYD5 112 aa15.19■□□□□ 0.02
SMCO4-201ENST00000298966 NAGKQ9UJ70 344 aa15.19■□□□□ 0.02
SMCO4-201ENST00000298966 IGHV1OR15-1A0A075B7D0 117 aa15.18■□□□□ 0.02
SMCO4-201ENST00000298966 SNURFLB1AK76 121 aa15.18■□□□□ 0.02
SMCO4-201ENST00000298966 KIR3DS1Q14943 382 aa15.18■□□□□ 0.02
SMCO4-201ENST00000298966 ZFP82Q8N141 532 aa15.18■□□□□ 0.02
SMCO4-201ENST00000298966 FRZBQ92765 325 aa15.18■□□□□ 0.02
SMCO4-201ENST00000298966 SSBP4Q9BWG4 385 aaPredicted RBP15.18■□□□□ 0.02
SMCO4-201ENST00000298966 TRGV11A0A075B6L2 103 aa15.17■□□□□ 0.02
SMCO4-201ENST00000298966 TRAV12-2A0A075B6T6 113 aa15.17■□□□□ 0.02
SMCO4-201ENST00000298966 KIR2DL5BA0A0G2JN68 375 aa15.17■□□□□ 0.02
SMCO4-201ENST00000298966 KIR2DL5BA0A0G2JPC4 375 aa15.17■□□□□ 0.02
SMCO4-201ENST00000298966 SNAI2O43623 268 aa15.17■□□□□ 0.02
SMCO4-201ENST00000298966 CACNG7P62955 275 aa15.17■□□□□ 0.02
SMCO4-201ENST00000298966 FABP9Q0Z7S8 132 aa15.17■□□□□ 0.02
SMCO4-201ENST00000298966 KIR2DL5AQ8N109 375 aa15.17■□□□□ 0.02
SMCO4-201ENST00000298966 GATD1Q8NB37 220 aa15.17■□□□□ 0.02
SMCO4-201ENST00000298966 KIR2DL5BQ8NHK3 375 aa15.17■□□□□ 0.02
SMCO4-201ENST00000298966 MRPL18Q9H0U6 180 aaKnown RBP15.17■□□□□ 0.02
SMCO4-201ENST00000298966 TRGC1P0CF51 173 aa15.16■□□□□ 0.02
SMCO4-201ENST00000298966 S100A4P26447 101 aaKnown RBP15.16■□□□□ 0.02
SMCO4-201ENST00000298966 LYZL1Q6UWQ5 148 aa15.16■□□□□ 0.02
SMCO4-201ENST00000298966 MUC4Q99102 2169 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST1H2BKO60814 126 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST1H2BJP06899 126 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 ARMS2P0C7Q2 107 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST1H2BOP23527 126 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST1H2BBP33778 126 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST1H2BDP58876 126 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST1H2BCP62807 126 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST2H2BEQ16778 126 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.15■□□□□ 0.02
SMCO4-201ENST00000298966 MUC21Q5SSG8 566 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST1H2BHQ93079 126 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST1H2BNQ99877 126 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 HIST1H2BMQ99879 126 aa15.15■□□□□ 0.02
SMCO4-201ENST00000298966 GRIFINA4D1Z8 144 aa15.14■□□□□ 0.01
SMCO4-201ENST00000298966 FXYD7P58549 80 aa15.14■□□□□ 0.01
SMCO4-201ENST00000298966 RAB4BP61018 213 aa15.14■□□□□ 0.01
SMCO4-201ENST00000298966 Q6ZQT7 251 aa15.14■□□□□ 0.01
SMCO4-201ENST00000298966 GOLT1BQ9Y3E0 138 aa15.14■□□□□ 0.01
SMCO4-201ENST00000298966 IGHV4-4A0A075B6R2 117 aa15.13■□□□□ 0.01
SMCO4-201ENST00000298966 CAMPP49913 170 aa15.13■□□□□ 0.01
SMCO4-201ENST00000298966 TPPP3Q9BW30 176 aa15.13■□□□□ 0.01
SMCO4-201ENST00000298966 TP53TG3Q9ULZ0 132 aa15.13■□□□□ 0.01
SMCO4-201ENST00000298966 S100A6P06703 90 aa15.12■□□□□ 0.01
SMCO4-201ENST00000298966 RPL35AP18077 110 aaKnown RBP15.12■□□□□ 0.01
SMCO4-201ENST00000298966 TCTAP57738 103 aa15.12■□□□□ 0.01
SMCO4-201ENST00000298966 CSTL1Q9H114 145 aa15.12■□□□□ 0.01
SMCO4-201ENST00000298966 SCRT2Q9NQ03 307 aa15.12■□□□□ 0.01
SMCO4-201ENST00000298966 APCSP02743 223 aa15.11■□□□□ 0.01
SMCO4-201ENST00000298966 LINC00336Q6ZUF6 198 aa15.11■□□□□ 0.01
SMCO4-201ENST00000298966 C11orf45Q8TAV5 145 aa15.11■□□□□ 0.01
SMCO4-201ENST00000298966 XCL2Q9UBD3 114 aa15.11■□□□□ 0.01
SMCO4-201ENST00000298966 DNAH17Q9UFH2 4485 aa15.1■□□□□ 0.01
SMCO4-201ENST00000298966 H3BVH4 76 aa15.1■□□□□ 0.01
SMCO4-201ENST00000298966 NANOS2P60321 138 aaKnown RBP15.1■□□□□ 0.01
SMCO4-201ENST00000298966 ZNF493Q6ZR52 646 aa15.1■□□□□ 0.01
SMCO4-201ENST00000298966 LINC01587Q99440 93 aa15.1■□□□□ 0.01
SMCO4-201ENST00000298966 TMEM208Q9BTX3 173 aa15.1■□□□□ 0.01
SMCO4-201ENST00000298966 PHLDA3Q9Y5J5 127 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms