RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 K7ERU9 68 aa7.53□□□□□ -1.2
TNFRSF11B-201ENST00000297350 LGALS9O00182 355 aa7.53□□□□□ -1.2
TNFRSF11B-201ENST00000297350 ERASQ7Z444 233 aa7.53□□□□□ -1.2
TNFRSF11B-201ENST00000297350 RNF152Q8N8N0 203 aa7.53□□□□□ -1.2
TNFRSF11B-201ENST00000297350 NEXN-AS1Q8NBZ9 246 aa7.53□□□□□ -1.2
TNFRSF11B-201ENST00000297350 CST9LQ9H4G1 147 aa7.53□□□□□ -1.2
TNFRSF11B-201ENST00000297350 TMEM160Q9NX00 188 aa7.53□□□□□ -1.2
TNFRSF11B-201ENST00000297350 IGKV2D-26A0A0A0MRZ7 120 aa7.52□□□□□ -1.2
TNFRSF11B-201ENST00000297350 C14orf178Q8N769 122 aaPredicted RBP7.52□□□□□ -1.2
TNFRSF11B-201ENST00000297350 RNASE8Q8TDE3 154 aaKnown RBP7.52□□□□□ -1.2
TNFRSF11B-201ENST00000297350 A0A1W2PPM0 123 aa7.52□□□□□ -1.21
TNFRSF11B-201ENST00000297350 GAGE12BA1L429 117 aa7.52□□□□□ -1.21
TNFRSF11B-201ENST00000297350 DUSP14O95147 198 aaKnown RBP7.52□□□□□ -1.21
TNFRSF11B-201ENST00000297350 PRB1P04280 392 aa7.52□□□□□ -1.21
TNFRSF11B-201ENST00000297350 ELANEP08246 267 aa7.52□□□□□ -1.21
TNFRSF11B-201ENST00000297350 FABP2P12104 132 aa7.52□□□□□ -1.21
TNFRSF11B-201ENST00000297350 GTSCR1Q86UQ5 136 aa7.52□□□□□ -1.21
TNFRSF11B-201ENST00000297350 CEND1Q8N111 149 aa7.52□□□□□ -1.21
TNFRSF11B-201ENST00000297350 SYT8Q8NBV8 401 aa7.52□□□□□ -1.21
TNFRSF11B-201ENST00000297350 KIF25-AS1Q9Y6Z4 181 aa7.52□□□□□ -1.21
TNFRSF11B-201ENST00000297350 TRBV6-5A0A0K0K1A5 114 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 OR11H12B2RN74 326 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 MGPP08493 103 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 OCIAD2Q56VL3 154 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 C2orf66Q6UXQ4 117 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 Q6ZQT7 251 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 OR11H1Q8NG94 326 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 OR11H2Q8NH07 326 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 TMEM141Q96I45 108 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 CYSLTR1Q9Y271 337 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 H3BUT2 72 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 VCYO14598 125 aa7.51□□□□□ -1.21
TNFRSF11B-201ENST00000297350 TMEM238C9JI98 176 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 RNF223E7ERA6 249 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 J3KRW8 73 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 GCSHP23434 173 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 CSTL1Q9H114 145 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 MED13LQ71F56 2210 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 A0A0J9YX75 114 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 E9PLD3 99 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 LGALS1P09382 135 aaKnown RBP7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 COX6B1P14854 86 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 LINC00315P59091 139 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 RPL39LQ96EH5 51 aaKnown RBP7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 C9orf85Q96MD7 179 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 TIMM17AQ99595 171 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
TNFRSF11B-201ENST00000297350 F6UB75 175 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 K7EQG2 157 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 GNRH2O43555 120 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 RIPPLY3P57055 190 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 SAMD5Q5TGI4 173 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 BAALCQ8WXS3 180 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 JMJD8Q96S16 334 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 VPREB3Q9UKI3 123 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 TRAV2A0A0B4J234 112 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 MYMXA0A1B0GTQ4 84 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 POLR2KP53803 58 aaKnown RBP7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 HERVK_113P61574 105 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 DEFB112Q30KQ8 113 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 Q6ZS46 218 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 SPCS1Q9Y6A9 102 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 RELNP78509 3460 aa7.49□□□□□ -1.21
TNFRSF11B-201ENST00000297350 A0A096LNT2 108 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 TRBV27A0A0K0K1C4 114 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 AVPP01185 164 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 FSHBP01225 129 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 IGHV4-59P01825 116 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 RHOHQ15669 191 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 FOXI2Q6ZQN5 318 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 UBE2E2Q96LR5 201 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 IGHV3-16A0A0C4DH30 117 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 A0A1B0GWB2 263 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 CD7P09564 240 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 FXYD2P54710 66 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 Q5PR19 223 aa7.48□□□□□ -1.21
TNFRSF11B-201ENST00000297350 TRGV11A0A075B6L2 103 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 TCTAP57738 103 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 SUMO4Q6EEV6 95 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 PHLDA1Q8WV24 401 aaPredicted RBP7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 WFDC12Q8WWY7 111 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 EDA2RQ9HAV5 297 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 IGHV1OR15-1A0A075B7D0 117 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 PRSS29PA6NIE9 313 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 PMVKQ15126 192 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 PIK3CD-AS1Q5SR53 167 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 ZFP2Q6ZN57 461 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 TRPT1Q86TN4 253 aaKnown RBP7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 HIST1H4GQ99525 98 aa7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 ZNF256Q9Y2P7 627 aaPredicted RBP7.47□□□□□ -1.21
TNFRSF11B-201ENST00000297350 USP24Q9UPU5 2620 aa7.46□□□□□ -1.21
TNFRSF11B-201ENST00000297350 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.46□□□□□ -1.21
TNFRSF11B-201ENST00000297350 IGKV3-7A0A075B6H7 116 aa7.46□□□□□ -1.22
TNFRSF11B-201ENST00000297350 TRBV7-3A0A075B6L6 115 aa7.46□□□□□ -1.22
TNFRSF11B-201ENST00000297350 TRAV12-3A0A0B4J271 114 aa7.46□□□□□ -1.22
TNFRSF11B-201ENST00000297350 IGIPA6NJ69 53 aa7.46□□□□□ -1.22
TNFRSF11B-201ENST00000297350 DEFB1P60022 68 aa7.46□□□□□ -1.22
TNFRSF11B-201ENST00000297350 NSUN5P1Q3KNT7 163 aa7.46□□□□□ -1.22
TNFRSF11B-201ENST00000297350 Q6YL49 198 aa7.46□□□□□ -1.22
TNFRSF11B-201ENST00000297350 LCNL1Q6ZST4 164 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms