RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 C19orf73Q9NVV2 129 aa16.79■□□□□ 0.28
PTX3-201ENST00000295927 PHLDA3Q9Y5J5 127 aa16.79■□□□□ 0.28
PTX3-201ENST00000295927 MRPL51Q4U2R6 128 aaKnown RBP16.78■□□□□ 0.28
PTX3-201ENST00000295927 DMRTA1Q5VZB9 504 aa16.78■□□□□ 0.28
PTX3-201ENST00000295927 AMBPP02760 352 aa16.78■□□□□ 0.28
PTX3-201ENST00000295927 INSL3P51460 131 aa16.78■□□□□ 0.28
PTX3-201ENST00000295927 VWFP04275 2813 aa16.78■□□□□ 0.28
PTX3-201ENST00000295927 M0R381 172 aa16.77■□□□□ 0.28
PTX3-201ENST00000295927 ESDP10768 282 aa16.77■□□□□ 0.28
PTX3-201ENST00000295927 C9orf66Q5T8R8 295 aa16.77■□□□□ 0.28
PTX3-201ENST00000295927 Q8N1Y9 231 aa16.77■□□□□ 0.28
PTX3-201ENST00000295927 WFDC10AQ9H1F0 79 aa16.77■□□□□ 0.28
PTX3-201ENST00000295927 MUC4Q99102 2169 aa16.77■□□□□ 0.28
PTX3-201ENST00000295927 IGHV3-16A0A0C4DH30 117 aa16.76■□□□□ 0.27
PTX3-201ENST00000295927 EVI2AP22794 236 aa16.76■□□□□ 0.27
PTX3-201ENST00000295927 PRIMA1Q86XR5 153 aa16.76■□□□□ 0.27
PTX3-201ENST00000295927 RNF185Q96GF1 192 aa16.76■□□□□ 0.27
PTX3-201ENST00000295927 U3KQK5 164 aa16.76■□□□□ 0.27
PTX3-201ENST00000295927 D6R8Y8 96 aa16.75■□□□□ 0.27
PTX3-201ENST00000295927 RAB4AP20338 218 aa16.75■□□□□ 0.27
PTX3-201ENST00000295927 SMIM15Q7Z3B0 74 aa16.75■□□□□ 0.27
PTX3-201ENST00000295927 OR10D4PQ8NGN7 298 aa16.75■□□□□ 0.27
PTX3-201ENST00000295927 MDFICQ9P1T7 246 aa16.75■□□□□ 0.27
PTX3-201ENST00000295927 TMEM18Q96B42 140 aa16.74■□□□□ 0.27
PTX3-201ENST00000295927 INSP01308 110 aa16.73■□□□□ 0.27
PTX3-201ENST00000295927 ORMDL3Q8N138 153 aa16.73■□□□□ 0.27
PTX3-201ENST00000295927 PACRGQ96M98 296 aaPredicted RBP16.73■□□□□ 0.27
PTX3-201ENST00000295927 C9orf85Q96MD7 179 aa16.73■□□□□ 0.27
PTX3-201ENST00000295927 XCL2Q9UBD3 114 aa16.73■□□□□ 0.27
PTX3-201ENST00000295927 CBY3A6NI87 242 aa16.72■□□□□ 0.27
PTX3-201ENST00000295927 NXPH4O95158 308 aa16.72■□□□□ 0.27
PTX3-201ENST00000295927 CKS2P33552 79 aa16.72■□□□□ 0.27
PTX3-201ENST00000295927 ZNF747Q9BV97 191 aa16.72■□□□□ 0.27
PTX3-201ENST00000295927 TRGV11A0A075B6L2 103 aa16.72■□□□□ 0.27
PTX3-201ENST00000295927 SMKR1H3BMG3 65 aa16.72■□□□□ 0.27
PTX3-201ENST00000295927 PRELID3AQ96N28 172 aa16.72■□□□□ 0.27
PTX3-201ENST00000295927 C20orf144Q9BQM9 153 aa16.72■□□□□ 0.27
PTX3-201ENST00000295927 NUTF2P61970 127 aaKnown RBP16.71■□□□□ 0.27
PTX3-201ENST00000295927 NIT1Q86X76 327 aa16.71■□□□□ 0.27
PTX3-201ENST00000295927 URB1-AS1Q96HZ7 61 aa16.71■□□□□ 0.27
PTX3-201ENST00000295927 NCR2O95944 276 aa16.7■□□□□ 0.26
PTX3-201ENST00000295927 HTN1P15515 57 aa16.7■□□□□ 0.26
PTX3-201ENST00000295927 WFDC9Q8NEX5 89 aa16.7■□□□□ 0.26
PTX3-201ENST00000295927 RNASEKQ6P5S7 137 aaKnown RBP16.69■□□□□ 0.26
PTX3-201ENST00000295927 LINC01587Q99440 93 aa16.69■□□□□ 0.26
PTX3-201ENST00000295927 MCRIP2Q9BUT9 160 aaKnown RBP16.69■□□□□ 0.26
PTX3-201ENST00000295927 PPBPP02775 128 aa16.68■□□□□ 0.26
PTX3-201ENST00000295927 PRM2P04554 102 aa16.68■□□□□ 0.26
PTX3-201ENST00000295927 C14orf178Q8N769 122 aaPredicted RBP16.68■□□□□ 0.26
PTX3-201ENST00000295927 SAMD10Q9BYL1 202 aa16.68■□□□□ 0.26
PTX3-201ENST00000295927 FBN1P35555 2871 aaKnown RBP16.68■□□□□ 0.26
PTX3-201ENST00000295927 GAS8-AS1O95177 125 aa16.68■□□□□ 0.26
PTX3-201ENST00000295927 LINC00518Q8N0U6 118 aa16.68■□□□□ 0.26
PTX3-201ENST00000295927 AP1S3Q96PC3 154 aa16.68■□□□□ 0.26
PTX3-201ENST00000295927 LINC00467Q9BRT7 94 aa16.68■□□□□ 0.26
PTX3-201ENST00000295927 MAST4O15021 2626 aa16.67■□□□□ 0.26
PTX3-201ENST00000295927 NOTCH3Q9UM47 2321 aa16.67■□□□□ 0.26
PTX3-201ENST00000295927 RPL35AP18077 110 aaKnown RBP16.67■□□□□ 0.26
PTX3-201ENST00000295927 DEFB125Q8N687 156 aa16.67■□□□□ 0.26
PTX3-201ENST00000295927 DPH3P1Q9H4G8 78 aa16.67■□□□□ 0.26
PTX3-201ENST00000295927 NPYP01303 97 aa16.66■□□□□ 0.26
PTX3-201ENST00000295927 GTSCR1Q86UQ5 136 aa16.66■□□□□ 0.26
PTX3-201ENST00000295927 C1orf158Q8N1D5 194 aa16.66■□□□□ 0.26
PTX3-201ENST00000295927 C3orf56Q8N813 242 aa16.66■□□□□ 0.26
PTX3-201ENST00000295927 IGLL1P15814 213 aa16.66■□□□□ 0.26
PTX3-201ENST00000295927 PMCHP20382 165 aa16.66■□□□□ 0.26
PTX3-201ENST00000295927 HSBP1O75506 76 aa16.65■□□□□ 0.26
PTX3-201ENST00000295927 GIG44P09565 113 aaPredicted RBP16.65■□□□□ 0.26
PTX3-201ENST00000295927 LINC00614P0C842 121 aa16.65■□□□□ 0.26
PTX3-201ENST00000295927 AMTP48728 403 aa16.65■□□□□ 0.26
PTX3-201ENST00000295927 FAM19A2Q8N3H0 131 aa16.65■□□□□ 0.26
PTX3-201ENST00000295927 SYT8Q8NBV8 401 aa16.65■□□□□ 0.26
PTX3-201ENST00000295927 GATA1P15976 413 aaPredicted RBP16.64■□□□□ 0.26
PTX3-201ENST00000295927 CHCHD1Q96BP2 118 aaKnown RBP16.64■□□□□ 0.26
PTX3-201ENST00000295927 TMEM208Q9BTX3 173 aa16.64■□□□□ 0.26
PTX3-201ENST00000295927 JPT2Q9H910 190 aa16.64■□□□□ 0.26
PTX3-201ENST00000295927 TRAV26-2A0A0B4J265 109 aa16.64■□□□□ 0.25
PTX3-201ENST00000295927 LOC389332A0A1B0GUA5 103 aa16.64■□□□□ 0.25
PTX3-201ENST00000295927 SMIM6P0DI80 62 aa16.64■□□□□ 0.25
PTX3-201ENST00000295927 PRSS3P2Q8NHM4 247 aa16.63■□□□□ 0.25
PTX3-201ENST00000295927 LAMTOR2Q9Y2Q5 125 aa16.63■□□□□ 0.25
PTX3-201ENST00000295927 KIF25-AS1Q9Y6Z4 181 aa16.63■□□□□ 0.25
PTX3-201ENST00000295927 IGHV3OR16-12A0A075B7B8 117 aa16.62■□□□□ 0.25
PTX3-201ENST00000295927 TNFRSF6BO95407 300 aa16.62■□□□□ 0.25
PTX3-201ENST00000295927 PYY3Q5JQD4 70 aa16.62■□□□□ 0.25
PTX3-201ENST00000295927 SHISA2Q6UWI4 295 aa16.62■□□□□ 0.25
PTX3-201ENST00000295927 C12orf54Q6X4T0 127 aa16.62■□□□□ 0.25
PTX3-201ENST00000295927 C12orf57Q99622 126 aa16.62■□□□□ 0.25
PTX3-201ENST00000295927 MGPP08493 103 aa16.62■□□□□ 0.25
PTX3-201ENST00000295927 IFI27P40305 119 aaPredicted RBP16.62■□□□□ 0.25
PTX3-201ENST00000295927 ZNF415Q09FC8 603 aa16.62■□□□□ 0.25
PTX3-201ENST00000295927 MORN3Q6PF18 240 aaPredicted RBP16.62■□□□□ 0.25
PTX3-201ENST00000295927 MRAP2Q96G30 205 aa16.62■□□□□ 0.25
PTX3-201ENST00000295927 SMIM17P0DL12 118 aa16.61■□□□□ 0.25
PTX3-201ENST00000295927 ZNF876PQ49A33 203 aa16.61■□□□□ 0.25
PTX3-201ENST00000295927 GSN-AS1Q9NRJ2 163 aa16.61■□□□□ 0.25
PTX3-201ENST00000295927 TRRAPQ9Y4A5 3859 aa16.61■□□□□ 0.25
PTX3-201ENST00000295927 LINC00315P59091 139 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 NRACQ8N912 160 aa16.6■□□□□ 0.25
PTX3-201ENST00000295927 C11orf72Q8NBR9 251 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms