RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 C22orf46C9J442 243 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 KIR2DL5AQ8N109 375 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 OVOL3O00110 214 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 A0A0G2JNJ9 132 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 Q9UFV3 132 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 CGB3P0DN86 165 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 PSMB8P28062 276 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 EFNA4P52798 201 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 C14orf132Q9NPU4 83 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 CFC1BP0CG36 223 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 CFC1P0CG37 223 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 Q6ZVH6 145 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 Q6ZR03 302 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 SH2D6Q7Z4S9 175 aa7.84□□□□□ -1.15
COL6A3-201ENST00000295550 IGHV4-4A0A075B6R2 117 aa7.84□□□□□ -1.16
COL6A3-201ENST00000295550 IGHV1OR15-1A0A075B7D0 117 aa7.84□□□□□ -1.16
COL6A3-201ENST00000295550 RHOHQ15669 191 aa7.84□□□□□ -1.16
COL6A3-201ENST00000295550 ASPHD1Q5U4P2 390 aa7.84□□□□□ -1.16
COL6A3-201ENST00000295550 C17orf58Q2M2W7 97 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 RNF114Q9Y508 228 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 TEN1Q86WV5 123 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 TEX36Q5VZQ5 186 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 ABCA12Q86UK0 2595 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 C20orf78Q9BR46 151 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 SLC25A29Q8N8R3 303 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 Q9H8V8 135 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 TMEM14CQ9P0S9 112 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 TRAV12-2A0A075B6T6 113 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 IGLV1-44P01699 117 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 RMI2Q96E14 147 aa7.83□□□□□ -1.16
COL6A3-201ENST00000295550 IGLC7A0M8Q6 106 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 CGB7P0DN87 165 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 SAA4P35542 130 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 XCL1P47992 114 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 PYGO2Q9BRQ0 406 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 IGHV4-28A0A0C4DH34 117 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 WIPF2Q8TF74 440 aaPredicted RBP7.82□□□□□ -1.16
COL6A3-201ENST00000295550 A0A0B4J2C4 111 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 DEFB131AP59861 70 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 CDPF1Q6NVV7 123 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 EP400Q96L91 3159 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 DEFB121Q5J5C9 76 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 FOXI2Q6ZQN5 318 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 DEFB125Q8N687 156 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 COX7B2Q8TF08 81 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 MUSTN1Q8IVN3 82 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 SPACA3Q8IXA5 215 aa7.82□□□□□ -1.16
COL6A3-201ENST00000295550 LHBP01229 141 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 IGFBPL1Q8WX77 278 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 B4DSR2 109 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 ANGP03950 147 aaKnown RBP7.81□□□□□ -1.16
COL6A3-201ENST00000295550 SPTSSBQ8NFR3 76 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 LINC00311Q8N616 119 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 PRR25Q96S07 402 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 COA6Q5JTJ3 125 aaKnown RBP7.81□□□□□ -1.16
COL6A3-201ENST00000295550 IGFL3Q6UXB1 125 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 IGLL5B9A064 214 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 IGLC1P0CG04 106 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 Q6ZS92 163 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 LTAP01374 205 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 MLANAQ16655 118 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 MRPL55Q7Z7F7 128 aaKnown RBP7.81□□□□□ -1.16
COL6A3-201ENST00000295550 ZNRF2Q8NHG8 242 aa7.81□□□□□ -1.16
COL6A3-201ENST00000295550 CRYGBP07316 175 aa7.8□□□□□ -1.16
COL6A3-201ENST00000295550 PLA2G2EQ9NZK7 142 aa7.8□□□□□ -1.16
COL6A3-201ENST00000295550 C3orf56Q8N813 242 aa7.8□□□□□ -1.16
COL6A3-201ENST00000295550 VSIG2Q96IQ7 327 aa7.8□□□□□ -1.16
COL6A3-201ENST00000295550 K7EMI3 77 aa7.8□□□□□ -1.16
COL6A3-201ENST00000295550 K7EN84 100 aa7.8□□□□□ -1.16
COL6A3-201ENST00000295550 FXYD5Q96DB9 178 aa7.8□□□□□ -1.16
COL6A3-201ENST00000295550 H3BRN7 92 aa7.79□□□□□ -1.16
COL6A3-201ENST00000295550 ATP6V0E1O15342 81 aa7.79□□□□□ -1.16
COL6A3-201ENST00000295550 ZFP2Q6ZN57 461 aa7.79□□□□□ -1.16
COL6A3-201ENST00000295550 H3BQ85 93 aa7.79□□□□□ -1.16
COL6A3-201ENST00000295550 LYPD2Q6UXB3 125 aa7.79□□□□□ -1.16
COL6A3-201ENST00000295550 UBE2BP63146 152 aa7.79□□□□□ -1.16
COL6A3-201ENST00000295550 DYNAPQ8N1N2 210 aa7.79□□□□□ -1.16
COL6A3-201ENST00000295550 RNASE8Q8TDE3 154 aaKnown RBP7.79□□□□□ -1.16
COL6A3-201ENST00000295550 PROP1O75360 226 aa7.79□□□□□ -1.16
COL6A3-201ENST00000295550 RPL18AQ02543 176 aaKnown RBP7.79□□□□□ -1.16
COL6A3-201ENST00000295550 FGF23Q9GZV9 251 aaPredicted RBP7.79□□□□□ -1.16
COL6A3-201ENST00000295550 IGLV3-9A0A075B6K5 115 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 C11orf1Q9H5F2 150 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 FAM110DQ8TAY7 271 aaPredicted RBP7.78□□□□□ -1.16
COL6A3-201ENST00000295550 WT1-ASQ06250 92 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 PRR20EP86478 221 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 PRR20CP86479 221 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 PRR20DP86480 221 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 PRR20BP86481 221 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 PRR20AP86496 221 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 U3KQE9 123 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 IGF2BP2-AS1Q96M15 143 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 C11orf53Q8IXP5 236 aa7.78□□□□□ -1.16
COL6A3-201ENST00000295550 LINC01619G3V211 115 aa7.77□□□□□ -1.16
COL6A3-201ENST00000295550 APOC4P55056 127 aa7.77□□□□□ -1.16
COL6A3-201ENST00000295550 ETDCA0A1B0GVM5 59 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 LINC01356Q8N9X3 169 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 ZNRD1Q9P1U0 126 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 TRAV4A0A0B4J268 109 aa7.77□□□□□ -1.17
COL6A3-201ENST00000295550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 311.9 ms