RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 C8orf49Q96NF6 230 aa13.07□□□□□ -0.32
CCDC78-201ENST00000293889 ODF3Q96PU9 254 aa13.07□□□□□ -0.32
CCDC78-201ENST00000293889 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
CCDC78-201ENST00000293889 RPL35AP18077 110 aaKnown RBP13.06□□□□□ -0.32
CCDC78-201ENST00000293889 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
CCDC78-201ENST00000293889 SAPCD1Q5SSQ6 148 aa13.06□□□□□ -0.32
CCDC78-201ENST00000293889 LENEPQ9Y5L5 61 aa13.06□□□□□ -0.32
CCDC78-201ENST00000293889 TDRG1Q3Y452 100 aa13.06□□□□□ -0.32
CCDC78-201ENST00000293889 ZFAND2AQ8N6M9 145 aa13.06□□□□□ -0.32
CCDC78-201ENST00000293889 NDFIP1Q9BT67 221 aa13.06□□□□□ -0.32
CCDC78-201ENST00000293889 TRBV7-9A0A0J9YWB2 115 aa13.05□□□□□ -0.32
CCDC78-201ENST00000293889 K7EIL1 84 aa13.05□□□□□ -0.32
CCDC78-201ENST00000293889 M0R2Z0 102 aa13.05□□□□□ -0.32
CCDC78-201ENST00000293889 IGHV4-30-4P0DP06 118 aa13.05□□□□□ -0.32
CCDC78-201ENST00000293889 FXYD7P58549 80 aa13.05□□□□□ -0.32
CCDC78-201ENST00000293889 HBBP68871 147 aa13.05□□□□□ -0.32
CCDC78-201ENST00000293889 KIR3DS1Q14943 382 aa13.05□□□□□ -0.32
CCDC78-201ENST00000293889 SPINK13Q1W4C9 94 aa13.05□□□□□ -0.32
CCDC78-201ENST00000293889 LINC00322Q6ZN03 302 aaPredicted RBP13.05□□□□□ -0.32
CCDC78-201ENST00000293889 GATD1Q8NB37 220 aa13.05□□□□□ -0.32
CCDC78-201ENST00000293889 J3KRW8 73 aa13.04□□□□□ -0.32
CCDC78-201ENST00000293889 P01737 135 aa13.04□□□□□ -0.32
CCDC78-201ENST00000293889 C3orf79P0CE67 100 aa13.04□□□□□ -0.32
CCDC78-201ENST00000293889 LEPP41159 167 aa13.04□□□□□ -0.32
CCDC78-201ENST00000293889 TSPOP30536 169 aa13.03□□□□□ -0.32
CCDC78-201ENST00000293889 KRTDAPP60985 99 aa13.03□□□□□ -0.32
CCDC78-201ENST00000293889 PRR9Q5T870 116 aa13.03□□□□□ -0.32
CCDC78-201ENST00000293889 PRR27Q6MZM9 219 aa13.03□□□□□ -0.32
CCDC78-201ENST00000293889 COX8CQ7Z4L0 72 aa13.03□□□□□ -0.32
CCDC78-201ENST00000293889 GTSF1Q8WW33 167 aa13.03□□□□□ -0.32
CCDC78-201ENST00000293889 ZC2HC1AQ96GY0 325 aa13.03□□□□□ -0.32
CCDC78-201ENST00000293889 KLLNB2CW77 178 aa13.02□□□□□ -0.32
CCDC78-201ENST00000293889 PMCHP20382 165 aa13.02□□□□□ -0.32
CCDC78-201ENST00000293889 CDKN1BP46527 198 aa13.02□□□□□ -0.32
CCDC78-201ENST00000293889 PMCHL1Q16048 86 aa13.02□□□□□ -0.32
CCDC78-201ENST00000293889 TRAV12-2A0A075B6T6 113 aa13.02□□□□□ -0.33
CCDC78-201ENST00000293889 RNASE4P34096 147 aaKnown RBP13.02□□□□□ -0.33
CCDC78-201ENST00000293889 ZNF80P51504 273 aaPredicted RBP13.02□□□□□ -0.33
CCDC78-201ENST00000293889 BORCS7Q96B45 105 aa13.02□□□□□ -0.33
CCDC78-201ENST00000293889 LOC102724200A0A096LPH7 203 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-201ENST00000293889 C20orf202A1L168 122 aa13.01□□□□□ -0.33
CCDC78-201ENST00000293889 TCAPO15273 167 aa13.01□□□□□ -0.33
CCDC78-201ENST00000293889 CRXO43186 299 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-201ENST00000293889 GIG44P09565 113 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-201ENST00000293889 ZNF705AQ6ZN79 300 aaPredicted RBP13.01□□□□□ -0.33
CCDC78-201ENST00000293889 CHCHD1Q96BP2 118 aaKnown RBP13.01□□□□□ -0.33
CCDC78-201ENST00000293889 DAZAP1Q96EP5 407 aaKnown RBP13.01□□□□□ -0.33
CCDC78-201ENST00000293889 PAM16Q9Y3D7 125 aa13.01□□□□□ -0.33
CCDC78-201ENST00000293889 PRKDCP78527 4128 aaKnown RBP13.01□□□□□ -0.33
CCDC78-201ENST00000293889 A8MZ25 164 aa13□□□□□ -0.33
CCDC78-201ENST00000293889 CRIP1P50238 77 aa13□□□□□ -0.33
CCDC78-201ENST00000293889 MORN3Q6PF18 240 aaPredicted RBP13□□□□□ -0.33
CCDC78-201ENST00000293889 XCL2Q9UBD3 114 aa13□□□□□ -0.33
CCDC78-201ENST00000293889 HSBP1O75506 76 aa12.99□□□□□ -0.33
CCDC78-201ENST00000293889 Q6ZQT7 251 aa12.99□□□□□ -0.33
CCDC78-201ENST00000293889 MRAPQ8TCY5 172 aa12.99□□□□□ -0.33
CCDC78-201ENST00000293889 URB1-AS1Q96HZ7 61 aa12.99□□□□□ -0.33
CCDC78-201ENST00000293889 CSTL1Q9H114 145 aa12.99□□□□□ -0.33
CCDC78-201ENST00000293889 A0A1B0GW15 77 aa12.99□□□□□ -0.33
CCDC78-201ENST00000293889 C7orf71A4D174 169 aa12.99□□□□□ -0.33
CCDC78-201ENST00000293889 UQCR10Q9UDW1 63 aa12.99□□□□□ -0.33
CCDC78-201ENST00000293889 TRAV12-3A0A0B4J271 114 aa12.98□□□□□ -0.33
CCDC78-201ENST00000293889 IGLC3P0DOY3 106 aa12.98□□□□□ -0.33
CCDC78-201ENST00000293889 CAMPP49913 170 aa12.98□□□□□ -0.33
CCDC78-201ENST00000293889 SPATA45Q537H7 98 aa12.98□□□□□ -0.33
CCDC78-201ENST00000293889 FAM19A2Q8N3H0 131 aa12.98□□□□□ -0.33
CCDC78-201ENST00000293889 RBMY1A1P0DJD3 496 aaKnown RBP12.97□□□□□ -0.33
CCDC78-201ENST00000293889 RBMY1CP0DJD4 496 aa12.97□□□□□ -0.33
CCDC78-201ENST00000293889 RBMY1FQ15415 496 aaKnown RBP12.97□□□□□ -0.33
CCDC78-201ENST00000293889 Q6AWC8 147 aa12.97□□□□□ -0.33
CCDC78-201ENST00000293889 KIR2DL5BQ8NHK3 375 aa12.97□□□□□ -0.33
CCDC78-201ENST00000293889 SSBP4Q9BWG4 385 aaPredicted RBP12.97□□□□□ -0.33
CCDC78-201ENST00000293889 SH2D1AO60880 128 aa12.96□□□□□ -0.33
CCDC78-201ENST00000293889 INSP01308 110 aa12.96□□□□□ -0.33
CCDC78-201ENST00000293889 BTF3P20290 206 aaKnown RBP12.96□□□□□ -0.33
CCDC78-201ENST00000293889 APOC4P55056 127 aa12.96□□□□□ -0.33
CCDC78-201ENST00000293889 PGLYRP4Q96LB8 373 aa12.96□□□□□ -0.33
CCDC78-201ENST00000293889 TRAV21A0A0B4J279 112 aa12.95□□□□□ -0.34
CCDC78-201ENST00000293889 FABP5P3A8MUU1 101 aa12.95□□□□□ -0.34
CCDC78-201ENST00000293889 DEFB121Q5J5C9 76 aa12.95□□□□□ -0.34
CCDC78-201ENST00000293889 OR2D3Q8NGH3 330 aa12.95□□□□□ -0.34
CCDC78-201ENST00000293889 C1QTNF4Q9BXJ3 329 aa12.95□□□□□ -0.34
CCDC78-201ENST00000293889 OR5AL1P0C617 328 aa12.95□□□□□ -0.34
CCDC78-201ENST00000293889 NTF3P20783 257 aa12.95□□□□□ -0.34
CCDC78-201ENST00000293889 CSNK1G2-AS1Q8NCQ2 148 aa12.95□□□□□ -0.34
CCDC78-201ENST00000293889 C11orf21Q9P2W6 132 aa12.95□□□□□ -0.34
CCDC78-201ENST00000293889 TRAV9-2A0A087WT02 112 aa12.94□□□□□ -0.34
CCDC78-201ENST00000293889 GAGE1Q13065 139 aa12.94□□□□□ -0.34
CCDC78-201ENST00000293889 RIGQ13278 110 aa12.93□□□□□ -0.34
CCDC78-201ENST00000293889 RNASEKQ6P5S7 137 aaKnown RBP12.93□□□□□ -0.34
CCDC78-201ENST00000293889 C1orf158Q8N1D5 194 aa12.93□□□□□ -0.34
CCDC78-201ENST00000293889 MRPS16Q9Y3D3 137 aaKnown RBP12.93□□□□□ -0.34
CCDC78-201ENST00000293889 A0A1B0GUT8 65 aa12.92□□□□□ -0.34
CCDC78-201ENST00000293889 MUC21Q5SSG8 566 aa12.92□□□□□ -0.34
CCDC78-201ENST00000293889 NBEAL2Q6ZNJ1 2754 aa12.92□□□□□ -0.34
CCDC78-201ENST00000293889 ZNF493Q6ZR52 646 aa12.91□□□□□ -0.34
CCDC78-201ENST00000293889 TMEM70Q9BUB7 260 aa12.91□□□□□ -0.34
CCDC78-201ENST00000293889 ORM1P02763 201 aa12.91□□□□□ -0.34
CCDC78-201ENST00000293889 LINC00614P0C842 121 aa12.91□□□□□ -0.34
CCDC78-201ENST00000293889 LINC01587Q99440 93 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms