RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 A0A1W2PRE2 83 aa16.94■□□□□ 0.3
U2AF1-201ENST00000291552 RHOHQ15669 191 aa16.94■□□□□ 0.3
U2AF1-201ENST00000291552 ZFP69Q49AA0 526 aa16.94■□□□□ 0.3
U2AF1-201ENST00000291552 FXYD6-FXYD2A0A087WZ82 144 aa16.93■□□□□ 0.3
U2AF1-201ENST00000291552 IGKV3D-20A0A0C4DH25 116 aa16.93■□□□□ 0.3
U2AF1-201ENST00000291552 G3V3Q6 166 aa16.93■□□□□ 0.3
U2AF1-201ENST00000291552 HERC1Q15751 4861 aa16.92■□□□□ 0.3
U2AF1-201ENST00000291552 CIDEAO60543 219 aa16.92■□□□□ 0.3
U2AF1-201ENST00000291552 Q6ZSN1 163 aa16.92■□□□□ 0.3
U2AF1-201ENST00000291552 PRADC1Q9BSG0 188 aa16.92■□□□□ 0.3
U2AF1-201ENST00000291552 ARL2-SNX15V9GYD0 113 aa16.92■□□□□ 0.3
U2AF1-201ENST00000291552 CTXND1A0A1B0GTU2 59 aa16.91■□□□□ 0.3
U2AF1-201ENST00000291552 LRCOL1A6NCL2 159 aa16.91■□□□□ 0.3
U2AF1-201ENST00000291552 UBE2G2P60604 165 aa16.91■□□□□ 0.3
U2AF1-201ENST00000291552 SAPCD1Q5SSQ6 148 aa16.91■□□□□ 0.3
U2AF1-201ENST00000291552 INO80EQ8NBZ0 244 aaPredicted RBP16.91■□□□□ 0.3
U2AF1-201ENST00000291552 IBA57-AS1B1ANH7 110 aa16.9■□□□□ 0.3
U2AF1-201ENST00000291552 Q86TA4 180 aa16.9■□□□□ 0.3
U2AF1-201ENST00000291552 BORCS7-ASMTA0A0B4J1R7 106 aa16.89■□□□□ 0.29
U2AF1-201ENST00000291552 PEX7O00628 323 aa16.89■□□□□ 0.29
U2AF1-201ENST00000291552 LINC00694P0DN24 101 aa16.89■□□□□ 0.29
U2AF1-201ENST00000291552 FGF8P55075 233 aaPredicted RBP16.89■□□□□ 0.29
U2AF1-201ENST00000291552 OR10J3Q5JRS4 329 aa16.89■□□□□ 0.29
U2AF1-201ENST00000291552 LELP1Q5T871 98 aa16.89■□□□□ 0.29
U2AF1-201ENST00000291552 PARLQ9H300 379 aa16.89■□□□□ 0.29
U2AF1-201ENST00000291552 TRAV8-6A0A0B4J262 113 aa16.88■□□□□ 0.29
U2AF1-201ENST00000291552 EPM2AB3EWF7 344 aa16.88■□□□□ 0.29
U2AF1-201ENST00000291552 MGST1P10620 155 aaKnown RBP16.88■□□□□ 0.29
U2AF1-201ENST00000291552 OR2T35Q8NGX2 323 aa16.88■□□□□ 0.29
U2AF1-201ENST00000291552 FAM74A7A6NL05 159 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 IFNA7P01567 189 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 IGHV3-30P01768 117 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 IGHV3-33P01772 117 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 IGHV3-30-3P0DP02 117 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 IGHV3-30-5P0DP03 117 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 UFSP1Q6NVU6 142 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 Q8N3U1 123 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 GTSF1LQ9H1H1 148 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 JPT2Q9H910 190 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 Q9HAA7 133 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 Q9UF83 564 aa16.87■□□□□ 0.29
U2AF1-201ENST00000291552 ATP6V0E2Q8NHE4 81 aa16.86■□□□□ 0.29
U2AF1-201ENST00000291552 GCSHP23434 173 aa16.85■□□□□ 0.29
U2AF1-201ENST00000291552 CRIP1P50238 77 aa16.85■□□□□ 0.29
U2AF1-201ENST00000291552 ZC2HC1AQ96GY0 325 aa16.85■□□□□ 0.29
U2AF1-201ENST00000291552 CYTL1Q9NRR1 136 aa16.85■□□□□ 0.29
U2AF1-201ENST00000291552 FABP5P3A8MUU1 101 aa16.84■□□□□ 0.29
U2AF1-201ENST00000291552 PSCAO43653 123 aa16.84■□□□□ 0.29
U2AF1-201ENST00000291552 ASIPP42127 132 aa16.84■□□□□ 0.29
U2AF1-201ENST00000291552 PIK3CD-AS1Q5SR53 167 aa16.84■□□□□ 0.29
U2AF1-201ENST00000291552 ZFP2Q6ZN57 461 aa16.84■□□□□ 0.29
U2AF1-201ENST00000291552 SAMD10Q9BYL1 202 aa16.84■□□□□ 0.29
U2AF1-201ENST00000291552 MYCBP2O75592 4640 aa16.84■□□□□ 0.29
U2AF1-201ENST00000291552 A8MWV9 139 aa16.83■□□□□ 0.28
U2AF1-201ENST00000291552 H3BVH4 76 aa16.83■□□□□ 0.28
U2AF1-201ENST00000291552 S100A4P26447 101 aaKnown RBP16.83■□□□□ 0.28
U2AF1-201ENST00000291552 AKR1C8PQ5T2L2 129 aa16.83■□□□□ 0.28
U2AF1-201ENST00000291552 IL36BQ9NZH7 164 aa16.83■□□□□ 0.28
U2AF1-201ENST00000291552 GAGE12JA6NER3 117 aa16.82■□□□□ 0.28
U2AF1-201ENST00000291552 B4DEV8 164 aa16.82■□□□□ 0.28
U2AF1-201ENST00000291552 HAMPP81172 84 aa16.82■□□□□ 0.28
U2AF1-201ENST00000291552 GAGE1Q13065 139 aa16.82■□□□□ 0.28
U2AF1-201ENST00000291552 GAGE4Q13068 117 aa16.82■□□□□ 0.28
U2AF1-201ENST00000291552 GAGE5Q13069 117 aa16.82■□□□□ 0.28
U2AF1-201ENST00000291552 LGALSLQ3ZCW2 172 aaPredicted RBP16.82■□□□□ 0.28
U2AF1-201ENST00000291552 GAGE13Q4V321 117 aa16.82■□□□□ 0.28
U2AF1-201ENST00000291552 COX8CQ7Z4L0 72 aa16.82■□□□□ 0.28
U2AF1-201ENST00000291552 C14orf178Q8N769 122 aaPredicted RBP16.82■□□□□ 0.28
U2AF1-201ENST00000291552 HIST1H2BAQ96A08 127 aa16.82■□□□□ 0.28
U2AF1-201ENST00000291552 MAP1LC3B2A6NCE7 125 aa16.81■□□□□ 0.28
U2AF1-201ENST00000291552 KRBOX1C9JBD0 128 aa16.81■□□□□ 0.28
U2AF1-201ENST00000291552 DNLZQ5SXM8 178 aa16.81■□□□□ 0.28
U2AF1-201ENST00000291552 Q5VSD8 79 aa16.81■□□□□ 0.28
U2AF1-201ENST00000291552 DMRTA1Q5VZB9 504 aa16.81■□□□□ 0.28
U2AF1-201ENST00000291552 MAP1LC3BQ9GZQ8 125 aa16.81■□□□□ 0.28
U2AF1-201ENST00000291552 DMBT1Q9UGM3 2413 aaPredicted RBP16.8■□□□□ 0.28
U2AF1-201ENST00000291552 FLG2Q5D862 2391 aaPredicted RBP16.8■□□□□ 0.28
U2AF1-201ENST00000291552 SRRM2Q9UQ35 2752 aaKnown RBP16.8■□□□□ 0.28
U2AF1-201ENST00000291552 IGLV5-52A0A0A0MRZ9 124 aa16.8■□□□□ 0.28
U2AF1-201ENST00000291552 SH2D1AO60880 128 aa16.8■□□□□ 0.28
U2AF1-201ENST00000291552 Q8N814 137 aa16.8■□□□□ 0.28
U2AF1-201ENST00000291552 NKX6-2Q9C056 277 aaPredicted RBP16.8■□□□□ 0.28
U2AF1-201ENST00000291552 M0R036 132 aa16.79■□□□□ 0.28
U2AF1-201ENST00000291552 ARPC5O15511 151 aa16.79■□□□□ 0.28
U2AF1-201ENST00000291552 WFDC2Q14508 124 aa16.79■□□□□ 0.28
U2AF1-201ENST00000291552 LAGE3Q14657 143 aa16.79■□□□□ 0.28
U2AF1-201ENST00000291552 NTN5Q8WTR8 489 aaPredicted RBP16.79■□□□□ 0.28
U2AF1-201ENST00000291552 GRIFINA4D1Z8 144 aa16.78■□□□□ 0.28
U2AF1-201ENST00000291552 ARMS2P0C7Q2 107 aa16.78■□□□□ 0.28
U2AF1-201ENST00000291552 SMLR1H3BR10 107 aa16.77■□□□□ 0.28
U2AF1-201ENST00000291552 SMR3BP02814 79 aaPredicted RBP16.77■□□□□ 0.28
U2AF1-201ENST00000291552 FHITP49789 147 aa16.77■□□□□ 0.28
U2AF1-201ENST00000291552 ZFP30Q9Y2G7 519 aa16.77■□□□□ 0.28
U2AF1-201ENST00000291552 INAFM2P0DMQ5 153 aa16.76■□□□□ 0.27
U2AF1-201ENST00000291552 FMC1Q96HJ9 113 aa16.76■□□□□ 0.27
U2AF1-201ENST00000291552 TRBV6-1A0A0K0K1D8 114 aa16.75■□□□□ 0.27
U2AF1-201ENST00000291552 ZNF674Q2M3X9 581 aa16.75■□□□□ 0.27
U2AF1-201ENST00000291552 FAM162BQ5T6X4 162 aa16.75■□□□□ 0.27
U2AF1-201ENST00000291552 DAZ4Q86SG3 579 aaKnown RBP16.75■□□□□ 0.27
U2AF1-201ENST00000291552 FRZBQ92765 325 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms